RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 H3BUT2 72 aa12.19□□□□□ -0.46
SMC4-211ENST00000469858 CFAP161Q6P656 301 aa12.18□□□□□ -0.46
SMC4-211ENST00000469858 SFTA2Q6UW10 78 aa12.18□□□□□ -0.46
SMC4-211ENST00000469858 C2orf82Q6UX34 121 aa12.18□□□□□ -0.46
SMC4-211ENST00000469858 MEGF8Q7Z7M0 2845 aa12.18□□□□□ -0.46
SMC4-211ENST00000469858 CKS1BP61024 79 aa12.18□□□□□ -0.46
SMC4-211ENST00000469858 KIAA0087Q14695 138 aa12.18□□□□□ -0.46
SMC4-211ENST00000469858 CFC1BP0CG36 223 aa12.17□□□□□ -0.46
SMC4-211ENST00000469858 CFC1P0CG37 223 aa12.17□□□□□ -0.46
SMC4-211ENST00000469858 C1orf43Q9BWL3 253 aa12.17□□□□□ -0.46
SMC4-211ENST00000469858 EIF4EBP3O60516 100 aaPredicted RBP12.16□□□□□ -0.46
SMC4-211ENST00000469858 UPK3BQ9BT76 320 aa12.16□□□□□ -0.46
SMC4-211ENST00000469858 APLNQ9ULZ1 77 aa12.16□□□□□ -0.46
SMC4-211ENST00000469858 IFITM1P13164 125 aa12.16□□□□□ -0.46
SMC4-211ENST00000469858 VAMP3Q15836 100 aa12.16□□□□□ -0.46
SMC4-211ENST00000469858 KRTAP26-1Q6PEX3 210 aa12.16□□□□□ -0.46
SMC4-211ENST00000469858 Q9HAA7 133 aa12.16□□□□□ -0.46
SMC4-211ENST00000469858 KLK5Q9Y337 293 aaPredicted RBP12.16□□□□□ -0.46
SMC4-211ENST00000469858 IGKV2D-24A0A075B6R9 120 aa12.15□□□□□ -0.46
SMC4-211ENST00000469858 SPAG11BQ08648 103 aa12.15□□□□□ -0.46
SMC4-211ENST00000469858 LINC00308Q8TCZ7 52 aa12.15□□□□□ -0.46
SMC4-211ENST00000469858 CXCL5P42830 114 aa12.14□□□□□ -0.47
SMC4-211ENST00000469858 LINC00158P58513 81 aa12.14□□□□□ -0.47
SMC4-211ENST00000469858 NUPR2A6NF83 97 aa12.14□□□□□ -0.47
SMC4-211ENST00000469858 IBA57-AS1B1ANH7 110 aa12.14□□□□□ -0.47
SMC4-211ENST00000469858 PFN2P35080 140 aa12.14□□□□□ -0.47
SMC4-211ENST00000469858 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.13□□□□□ -0.47
SMC4-211ENST00000469858 MIR7-3HGQ8N6C7 128 aa12.13□□□□□ -0.47
SMC4-211ENST00000469858 LINC00526Q96FQ7 95 aa12.13□□□□□ -0.47
SMC4-211ENST00000469858 PGPEP1Q9NXJ5 209 aa12.13□□□□□ -0.47
SMC4-211ENST00000469858 ERG28Q9UKR5 140 aa12.13□□□□□ -0.47
SMC4-211ENST00000469858 SOSTDC1Q6X4U4 206 aa12.12□□□□□ -0.47
SMC4-211ENST00000469858 C6orf223Q8N319 242 aa12.12□□□□□ -0.47
SMC4-211ENST00000469858 UBE2DNLQ8IWF7 75 aa12.12□□□□□ -0.47
SMC4-211ENST00000469858 A0A0B4J2C4 111 aa12.11□□□□□ -0.47
SMC4-211ENST00000469858 A0A1W2PPM0 123 aa12.11□□□□□ -0.47
SMC4-211ENST00000469858 COPS9Q8WXC6 57 aa12.11□□□□□ -0.47
SMC4-211ENST00000469858 PRO1854Q9UHT4 67 aa12.1□□□□□ -0.47
SMC4-211ENST00000469858 TSPAN13O95857 204 aa12.09□□□□□ -0.47
SMC4-211ENST00000469858 HIGD2BQ4VC39 106 aa12.09□□□□□ -0.47
SMC4-211ENST00000469858 DYNC2H1Q8NCM8 4307 aaKnown RBP12.08□□□□□ -0.48
SMC4-211ENST00000469858 CSMD3Q7Z407 3707 aa12.08□□□□□ -0.48
SMC4-211ENST00000469858 FABP2P12104 132 aa12.08□□□□□ -0.48
SMC4-211ENST00000469858 UNQ6190/PRO20217Q6UXQ8 127 aa12.08□□□□□ -0.48
SMC4-211ENST00000469858 C9orf116Q5BN46 136 aaPredicted RBP12.07□□□□□ -0.48
SMC4-211ENST00000469858 C10orf25Q5T742 122 aa12.07□□□□□ -0.48
SMC4-211ENST00000469858 C15orf56Q8N910 161 aa12.07□□□□□ -0.48
SMC4-211ENST00000469858 H7C2G1 150 aa12.06□□□□□ -0.48
SMC4-211ENST00000469858 ZNF561-AS1K7EIQ3 104 aa12.06□□□□□ -0.48
SMC4-211ENST00000469858 NTN5Q8WTR8 489 aaPredicted RBP12.06□□□□□ -0.48
SMC4-211ENST00000469858 LYSTQ99698 3801 aa12.06□□□□□ -0.48
SMC4-211ENST00000469858 UBE2V1Q13404 147 aa12.05□□□□□ -0.48
SMC4-211ENST00000469858 SPCS1Q9Y6A9 102 aa12.05□□□□□ -0.48
SMC4-211ENST00000469858 COX17Q14061 63 aa12.04□□□□□ -0.48
SMC4-211ENST00000469858 PPDPFQ9H3Y8 114 aa12.04□□□□□ -0.48
SMC4-211ENST00000469858 GAGE10A6NGK3 116 aa12.03□□□□□ -0.48
SMC4-211ENST00000469858 RMI2Q96E14 147 aa12.03□□□□□ -0.48
SMC4-211ENST00000469858 Q1RN00 199 aa12.03□□□□□ -0.48
SMC4-211ENST00000469858 SND1-IT1Q9HBX3 110 aa12.03□□□□□ -0.48
SMC4-211ENST00000469858 DNAH7Q8WXX0 4024 aa12.03□□□□□ -0.48
SMC4-211ENST00000469858 K7EP34 96 aa12.02□□□□□ -0.49
SMC4-211ENST00000469858 CAMK2N2Q96S95 79 aa12.02□□□□□ -0.49
SMC4-211ENST00000469858 KRTAP1-5Q9BYS1 174 aa12.02□□□□□ -0.49
SMC4-211ENST00000469858 LOC107984156A0A0G2JMH3 177 aa12.01□□□□□ -0.49
SMC4-211ENST00000469858 GTF2H5Q6ZYL4 71 aa12.01□□□□□ -0.49
SMC4-211ENST00000469858 ARL17AQ8IVW1 177 aa12.01□□□□□ -0.49
SMC4-211ENST00000469858 RPL13AP40429 203 aaKnown RBP12.01□□□□□ -0.49
SMC4-211ENST00000469858 CASC10Q5T4H9 136 aa12.01□□□□□ -0.49
SMC4-211ENST00000469858 C6orf48Q9UBA6 75 aa12.01□□□□□ -0.49
SMC4-211ENST00000469858 DNAH1Q9P2D7 4330 aa12□□□□□ -0.49
SMC4-211ENST00000469858 GVQW2A0A096LPI5 108 aaPredicted RBP11.99□□□□□ -0.49
SMC4-211ENST00000469858 PSMB2P49721 201 aa11.99□□□□□ -0.49
SMC4-211ENST00000469858 PLECQ15149 4684 aaKnown RBP11.99□□□□□ -0.49
SMC4-211ENST00000469858 STARD9Q9P2P6 4700 aa11.99□□□□□ -0.49
SMC4-211ENST00000469858 C2orf48Q96LS8 159 aa11.98□□□□□ -0.49
SMC4-211ENST00000469858 Q6ZRU5 148 aa11.98□□□□□ -0.49
SMC4-211ENST00000469858 FBN3Q75N90 2809 aa11.97□□□□□ -0.49
SMC4-211ENST00000469858 USP17L23D6RBM5 183 aa11.97□□□□□ -0.49
SMC4-211ENST00000469858 TRBV30A0A0K0K1B3 111 aa11.96□□□□□ -0.49
SMC4-211ENST00000469858 IGKV2-28A0A075B6P5 120 aa11.96□□□□□ -0.5
SMC4-211ENST00000469858 IGKV2D-28P01615 120 aa11.96□□□□□ -0.5
SMC4-211ENST00000469858 SCGB1C2P0DMR2 95 aa11.95□□□□□ -0.5
SMC4-211ENST00000469858 LYRM7Q5U5X0 104 aa11.95□□□□□ -0.5
SMC4-211ENST00000469858 TENM2Q9NT68 2774 aa11.95□□□□□ -0.5
SMC4-211ENST00000469858 LINC00337Q8N6G1 96 aa11.94□□□□□ -0.5
SMC4-211ENST00000469858 LECT2O14960 151 aa11.94□□□□□ -0.5
SMC4-211ENST00000469858 TRIAP1O43715 76 aa11.94□□□□□ -0.5
SMC4-211ENST00000469858 MUC7Q8TAX7 377 aa11.94□□□□□ -0.5
SMC4-211ENST00000469858 TRAV13-2A0A0B4J235 113 aa11.93□□□□□ -0.5
SMC4-211ENST00000469858 SYCNQ0VAF6 134 aa11.93□□□□□ -0.5
SMC4-211ENST00000469858 F8WDY8 70 aa11.92□□□□□ -0.5
SMC4-211ENST00000469858 H3BMG7 143 aa11.92□□□□□ -0.5
SMC4-211ENST00000469858 NBDYA0A0U1RRE5 68 aa11.91□□□□□ -0.5
SMC4-211ENST00000469858 TTC32Q5I0X7 151 aa11.91□□□□□ -0.5
SMC4-211ENST00000469858 PSCAO43653 123 aa11.9□□□□□ -0.5
SMC4-211ENST00000469858 TCL1BO95988 128 aa11.9□□□□□ -0.5
SMC4-211ENST00000469858 PRR3P79522 188 aaKnown RBP11.9□□□□□ -0.5
SMC4-211ENST00000469858 CARD19Q96LW7 228 aa11.89□□□□□ -0.51
SMC4-211ENST00000469858 XAGE1AQ9HD64 81 aa11.89□□□□□ -0.51
SMC4-211ENST00000469858 NDUFC2O95298 119 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms