RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 C11orf86A6NJI1 115 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 HIST1H2BKO60814 126 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 PLA2G1BP04054 148 aaKnown RBP5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 HIST1H2BJP06899 126 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 ZNF22P17026 224 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 HIST1H2BOP23527 126 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 HIST1H2BBP33778 126 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 HIST1H2BDP58876 126 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 HIST1H2BCP62807 126 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 ODF1Q14990 250 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 HIST2H2BEQ16778 126 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 C2orf82Q6UX34 121 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 UNQ6190/PRO20217Q6UXQ8 127 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 HIST1H2BHQ93079 126 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 HIST1H2BNQ99877 126 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 HIST1H2BMQ99879 126 aa5.23□□□□□ -1.57
TRAPPC3-206ENST00000469757 F8VRH5 84 aa5.22□□□□□ -1.57
TRAPPC3-206ENST00000469757 H3BRM9 83 aa5.22□□□□□ -1.57
TRAPPC3-206ENST00000469757 PRSS2P07478 247 aa5.22□□□□□ -1.57
TRAPPC3-206ENST00000469757 S100A1P23297 94 aa5.22□□□□□ -1.57
TRAPPC3-206ENST00000469757 MAJINQ3KP22 176 aa5.22□□□□□ -1.57
TRAPPC3-206ENST00000469757 Q6ZRP5 223 aa5.22□□□□□ -1.57
TRAPPC3-206ENST00000469757 STPG4Q8N801 248 aa5.22□□□□□ -1.57
TRAPPC3-206ENST00000469757 COX7B2Q8TF08 81 aa5.22□□□□□ -1.57
TRAPPC3-206ENST00000469757 NDUFC2-KCTD14E9PQ53 114 aa5.21□□□□□ -1.58
TRAPPC3-206ENST00000469757 ATP6V1G1O75348 118 aa5.21□□□□□ -1.58
TRAPPC3-206ENST00000469757 SPINK8P0C7L1 97 aa5.21□□□□□ -1.58
TRAPPC3-206ENST00000469757 CKS1BP61024 79 aa5.21□□□□□ -1.58
TRAPPC3-206ENST00000469757 RPL18AQ02543 176 aaKnown RBP5.21□□□□□ -1.58
TRAPPC3-206ENST00000469757 COA6Q5JTJ3 125 aaKnown RBP5.21□□□□□ -1.58
TRAPPC3-206ENST00000469757 FAM19A2Q8N3H0 131 aa5.21□□□□□ -1.58
TRAPPC3-206ENST00000469757 NUPR1O60356 82 aa5.2□□□□□ -1.58
TRAPPC3-206ENST00000469757 LEPROTL1O95214 131 aa5.2□□□□□ -1.58
TRAPPC3-206ENST00000469757 C6orf226Q5I0X4 101 aa5.2□□□□□ -1.58
TRAPPC3-206ENST00000469757 SFTA2Q6UW10 78 aa5.2□□□□□ -1.58
TRAPPC3-206ENST00000469757 TOMM7Q9P0U1 55 aa5.2□□□□□ -1.58
TRAPPC3-206ENST00000469757 HSPB8Q9UJY1 196 aa5.2□□□□□ -1.58
TRAPPC3-206ENST00000469757 CHTOPQ9Y3Y2 248 aaKnown RBP5.2□□□□□ -1.58
TRAPPC3-206ENST00000469757 MYCBP2O75592 4640 aa5.2□□□□□ -1.58
TRAPPC3-206ENST00000469757 NDUFA6P56556 154 aa5.19□□□□□ -1.58
TRAPPC3-206ENST00000469757 RPL37AP61513 92 aaKnown RBP5.19□□□□□ -1.58
TRAPPC3-206ENST00000469757 PRR3P79522 188 aaKnown RBP5.19□□□□□ -1.58
TRAPPC3-206ENST00000469757 GAGE2BQ13066 116 aa5.19□□□□□ -1.58
TRAPPC3-206ENST00000469757 C7orf33Q8WU49 177 aa5.19□□□□□ -1.58
TRAPPC3-206ENST00000469757 A0A1W2PNN7 141 aa5.18□□□□□ -1.58
TRAPPC3-206ENST00000469757 TMEM223A0PJW6 202 aa5.18□□□□□ -1.58
TRAPPC3-206ENST00000469757 INAFM2P0DMQ5 153 aa5.18□□□□□ -1.58
TRAPPC3-206ENST00000469757 PLNP26678 52 aa5.18□□□□□ -1.58
TRAPPC3-206ENST00000469757 C9orf116Q5BN46 136 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC3-206ENST00000469757 C9orf129Q5T035 196 aaKnown RBP5.18□□□□□ -1.58
TRAPPC3-206ENST00000469757 KRTAP7-1Q8IUC3 87 aa5.18□□□□□ -1.58
TRAPPC3-206ENST00000469757 ZNF625Q96I27 306 aaPredicted RBP5.18□□□□□ -1.58
TRAPPC3-206ENST00000469757 DMBT1Q9UGM3 2413 aaPredicted RBP5.17□□□□□ -1.58
TRAPPC3-206ENST00000469757 TMEM170BQ5T4T1 132 aa5.17□□□□□ -1.58
TRAPPC3-206ENST00000469757 PKHD1L1Q86WI1 4243 aa5.17□□□□□ -1.58
TRAPPC3-206ENST00000469757 FLG2Q5D862 2391 aaPredicted RBP5.16□□□□□ -1.58
TRAPPC3-206ENST00000469757 HNRNPA3P51991 378 aaKnown RBP5.16□□□□□ -1.58
TRAPPC3-206ENST00000469757 FAM168BA1KXE4 195 aa5.15□□□□□ -1.59
TRAPPC3-206ENST00000469757 DPM2O94777 84 aa5.15□□□□□ -1.59
TRAPPC3-206ENST00000469757 COX17Q14061 63 aa5.15□□□□□ -1.59
TRAPPC3-206ENST00000469757 GAGE2EQ4V326 116 aa5.15□□□□□ -1.59
TRAPPC3-206ENST00000469757 DPH3Q96FX2 82 aa5.15□□□□□ -1.59
TRAPPC3-206ENST00000469757 MAP1LC3CQ9BXW4 147 aa5.15□□□□□ -1.59
TRAPPC3-206ENST00000469757 GAGE2DQ9UEU5 116 aa5.15□□□□□ -1.59
TRAPPC3-206ENST00000469757 TP73-AS1Q9UF72 201 aa5.15□□□□□ -1.59
TRAPPC3-206ENST00000469757 PLA2G2DQ9UNK4 145 aa5.15□□□□□ -1.59
TRAPPC3-206ENST00000469757 IGLV5-37A0A075B6J1 123 aa5.14□□□□□ -1.59
TRAPPC3-206ENST00000469757 SYS1-DBNDD2H3BUS1 97 aa5.14□□□□□ -1.59
TRAPPC3-206ENST00000469757 M0QXV9 152 aa5.14□□□□□ -1.59
TRAPPC3-206ENST00000469757 FABP4P15090 132 aa5.14□□□□□ -1.59
TRAPPC3-206ENST00000469757 LINC01545Q5VT33 79 aa5.14□□□□□ -1.59
TRAPPC3-206ENST00000469757 FAM19A5Q7Z5A7 132 aaPredicted RBP5.14□□□□□ -1.59
TRAPPC3-206ENST00000469757 ERG28Q9UKR5 140 aa5.14□□□□□ -1.59
TRAPPC3-206ENST00000469757 KRTAP29-1A8MX34 341 aaPredicted RBP5.13□□□□□ -1.59
TRAPPC3-206ENST00000469757 H0Y8G0 127 aa5.13□□□□□ -1.59
TRAPPC3-206ENST00000469757 IGKCP01834 107 aa5.13□□□□□ -1.59
TRAPPC3-206ENST00000469757 TSPEAR-AS2P59090 65 aa5.13□□□□□ -1.59
TRAPPC3-206ENST00000469757 SERTAD4-AS1Q5TG53 156 aa5.13□□□□□ -1.59
TRAPPC3-206ENST00000469757 XAGE1AQ9HD64 81 aa5.13□□□□□ -1.59
TRAPPC3-206ENST00000469757 HERV-K104P63124 156 aa5.12□□□□□ -1.59
TRAPPC3-206ENST00000469757 PET117Q6UWS5 81 aa5.12□□□□□ -1.59
TRAPPC3-206ENST00000469757 PHF5AQ7RTV0 110 aaKnown RBP5.12□□□□□ -1.59
TRAPPC3-206ENST00000469757 KRTAP11-1Q8IUC1 163 aa5.12□□□□□ -1.59
TRAPPC3-206ENST00000469757 PSORS1C2Q9UIG4 136 aa5.12□□□□□ -1.59
TRAPPC3-206ENST00000469757 LEPROTO15243 131 aa5.11□□□□□ -1.59
TRAPPC3-206ENST00000469757 NMUP48645 174 aa5.11□□□□□ -1.59
TRAPPC3-206ENST00000469757 PLEKHB2Q96CS7 222 aa5.11□□□□□ -1.59
TRAPPC3-206ENST00000469757 PMCHL2Q9BQD1 86 aa5.11□□□□□ -1.59
TRAPPC3-206ENST00000469757 SND1-IT1Q9HBX3 110 aa5.11□□□□□ -1.59
TRAPPC3-206ENST00000469757 E9PLD3 99 aa5.1□□□□□ -1.59
TRAPPC3-206ENST00000469757 OXTP01178 125 aa5.1□□□□□ -1.59
TRAPPC3-206ENST00000469757 C3orf79P0CE67 100 aa5.1□□□□□ -1.59
TRAPPC3-206ENST00000469757 HERVK_113P61574 105 aa5.1□□□□□ -1.59
TRAPPC3-206ENST00000469757 SRSF9Q13242 221 aaKnown RBP eCLIP5.1□□□□□ -1.59
TRAPPC3-206ENST00000469757 NDUFA12Q9UI09 145 aa5.1□□□□□ -1.59
TRAPPC3-206ENST00000469757 MYMXA0A1B0GTQ4 84 aa5.09□□□□□ -1.59
TRAPPC3-206ENST00000469757 J3QQQ9 107 aa5.09□□□□□ -1.59
TRAPPC3-206ENST00000469757 VPREB1P12018 145 aa5.09□□□□□ -1.59
TRAPPC3-206ENST00000469757 PFN2P35080 140 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms