RNA–Protein interactions for RNA: ENST00000469159.1

NCSTN-212, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 856 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-212ENST00000469159 FCER1GP30273 86 aa4.55□□□□□ -1.68
NCSTN-212ENST00000469159 SEC61BP60468 96 aaKnown RBP4.55□□□□□ -1.68
NCSTN-212ENST00000469159 UBE2BP63146 152 aa4.55□□□□□ -1.68
NCSTN-212ENST00000469159 CTAG1AP78358 180 aa4.55□□□□□ -1.68
NCSTN-212ENST00000469159 RNF151Q2KHN1 245 aa4.55□□□□□ -1.68
NCSTN-212ENST00000469159 RNASEKQ6P5S7 137 aaKnown RBP4.55□□□□□ -1.68
NCSTN-212ENST00000469159 FAM19A5Q7Z5A7 132 aaPredicted RBP4.55□□□□□ -1.68
NCSTN-212ENST00000469159 KRTAP7-1Q8IUC3 87 aa4.55□□□□□ -1.68
NCSTN-212ENST00000469159 LINC00337Q8N6G1 96 aa4.55□□□□□ -1.68
NCSTN-212ENST00000469159 C2orf48Q96LS8 159 aa4.55□□□□□ -1.68
NCSTN-212ENST00000469159 TIMM21Q9BVV7 248 aa4.55□□□□□ -1.68
NCSTN-212ENST00000469159 CSDC2Q9Y534 153 aaKnown RBP4.55□□□□□ -1.68
NCSTN-212ENST00000469159 LOC389332A0A1B0GUA5 103 aa4.54□□□□□ -1.68
NCSTN-212ENST00000469159 RAB5AP20339 215 aa4.54□□□□□ -1.68
NCSTN-212ENST00000469159 IFI27P40305 119 aaPredicted RBP4.54□□□□□ -1.68
NCSTN-212ENST00000469159 LINC00304Q8N9R0 145 aa4.54□□□□□ -1.68
NCSTN-212ENST00000469159 C18orf32Q8TCD1 76 aa4.54□□□□□ -1.68
NCSTN-212ENST00000469159 M0QXV9 152 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 MALP21145 153 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 SS18Q15532 418 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 KRTAP13-2Q52LG2 175 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 ORMDL2Q53FV1 153 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 LCE3BQ5TA77 95 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 FAM104AQ969W3 186 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 TMEM18Q96B42 140 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 URB1-AS1Q96HZ7 61 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 CDC42SE2Q9NRR3 84 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 SPANXA1Q9NS26 97 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 UBE2D4Q9Y2X8 147 aa4.53□□□□□ -1.68
NCSTN-212ENST00000469159 TRGC2P03986 189 aa4.52□□□□□ -1.69
NCSTN-212ENST00000469159 RPL39P62891 51 aaKnown RBP4.52□□□□□ -1.69
NCSTN-212ENST00000469159 MRPS36P82909 103 aaKnown RBP4.52□□□□□ -1.69
NCSTN-212ENST00000469159 SMAGPQ0VAQ4 97 aa4.52□□□□□ -1.69
NCSTN-212ENST00000469159 KRTAP13-3Q3SY46 172 aa4.52□□□□□ -1.69
NCSTN-212ENST00000469159 PYGO1Q9Y3Y4 419 aa4.52□□□□□ -1.69
NCSTN-212ENST00000469159 COX7A2LO14548 114 aa4.51□□□□□ -1.69
NCSTN-212ENST00000469159 NPSP0C0P6 89 aa4.51□□□□□ -1.69
NCSTN-212ENST00000469159 TLX1NBP0CAT3 122 aa4.51□□□□□ -1.69
NCSTN-212ENST00000469159 G0S2P27469 103 aa4.51□□□□□ -1.69
NCSTN-212ENST00000469159 C2orf66Q6UXQ4 117 aa4.51□□□□□ -1.69
NCSTN-212ENST00000469159 TMEM101Q96IK0 257 aa4.51□□□□□ -1.69
NCSTN-212ENST00000469159 ANAPC11Q9NYG5 84 aa4.51□□□□□ -1.69
NCSTN-212ENST00000469159 MRPL35Q9NZE8 188 aaKnown RBP4.51□□□□□ -1.69
NCSTN-212ENST00000469159 CYSLTR1Q9Y271 337 aa4.51□□□□□ -1.69
NCSTN-212ENST00000469159 A0A096LNJ9 63 aa4.5□□□□□ -1.69
NCSTN-212ENST00000469159 LINC01549A6NIU2 74 aa4.5□□□□□ -1.69
NCSTN-212ENST00000469159 IGIPA6NJ69 53 aa4.5□□□□□ -1.69
NCSTN-212ENST00000469159 LINC00614P0C842 121 aa4.5□□□□□ -1.69
NCSTN-212ENST00000469159 LINC00242Q5T6M2 205 aa4.5□□□□□ -1.69
NCSTN-212ENST00000469159 Q6ZUT4 128 aa4.5□□□□□ -1.69
NCSTN-212ENST00000469159 FP248Q71RG6 208 aaPredicted RBP4.5□□□□□ -1.69
NCSTN-212ENST00000469159 FA2HQ7L5A8 372 aa4.5□□□□□ -1.69
NCSTN-212ENST00000469159 TOMM6Q96B49 74 aa4.5□□□□□ -1.69
NCSTN-212ENST00000469159 IGLV4-3A0A075B6K6 122 aa4.49□□□□□ -1.69
NCSTN-212ENST00000469159 NUPR1O60356 82 aa4.49□□□□□ -1.69
NCSTN-212ENST00000469159 EIF4EBP3O60516 100 aaPredicted RBP4.49□□□□□ -1.69
NCSTN-212ENST00000469159 LINC00310P59036 64 aa4.49□□□□□ -1.69
NCSTN-212ENST00000469159 RAB5BP61020 215 aa4.49□□□□□ -1.69
NCSTN-212ENST00000469159 CHCHD1Q96BP2 118 aaKnown RBP4.49□□□□□ -1.69
NCSTN-212ENST00000469159 TIMM17AQ99595 171 aa4.49□□□□□ -1.69
NCSTN-212ENST00000469159 KRTAP4-12Q9BQ66 201 aa4.49□□□□□ -1.69
NCSTN-212ENST00000469159 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 USH2AO75445 5202 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 C1orf196B1AJZ1 125 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 HIST1H2BKO60814 126 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 HIST1H2BJP06899 126 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 HIST1H2BOP23527 126 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 HIST1H2BBP33778 126 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 RPL28P46779 137 aaKnown RBP4.48□□□□□ -1.69
NCSTN-212ENST00000469159 HIST1H2BDP58876 126 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 HIST1H2BCP62807 126 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 SPAG11BQ08648 103 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 HIST2H2BEQ16778 126 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 GAGE2EQ4V326 116 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 PDZD11Q5EBL8 140 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.48□□□□□ -1.69
NCSTN-212ENST00000469159 ERASQ7Z444 233 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 HIST1H2BHQ93079 126 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 TMEM141Q96I45 108 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 AMELXQ99217 191 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 HIST1H2BNQ99877 126 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 HIST1H2BMQ99879 126 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 GAGE2DQ9UEU5 116 aa4.48□□□□□ -1.69
NCSTN-212ENST00000469159 FCGBPQ9Y6R7 5405 aaPredicted RBP4.47□□□□□ -1.69
NCSTN-212ENST00000469159 F8WDY8 70 aa4.47□□□□□ -1.69
NCSTN-212ENST00000469159 HBDP02042 147 aa4.47□□□□□ -1.69
NCSTN-212ENST00000469159 FAM229BQ4G0N7 80 aa4.47□□□□□ -1.69
NCSTN-212ENST00000469159 RNASE13Q5GAN3 156 aaKnown RBP4.47□□□□□ -1.69
NCSTN-212ENST00000469159 PAPPA-AS1Q5QFB9 102 aa4.47□□□□□ -1.69
NCSTN-212ENST00000469159 C10orf25Q5T742 122 aa4.47□□□□□ -1.69
NCSTN-212ENST00000469159 OR10D4PQ8NGN7 298 aa4.47□□□□□ -1.69
NCSTN-212ENST00000469159 TRAV13-1A0A0B4J241 112 aa4.46□□□□□ -1.7
NCSTN-212ENST00000469159 IFITM10A6NMD0 228 aa4.46□□□□□ -1.7
NCSTN-212ENST00000469159 SERF1AO75920 110 aa4.46□□□□□ -1.7
NCSTN-212ENST00000469159 COA6Q5JTJ3 125 aaKnown RBP4.46□□□□□ -1.7
NCSTN-212ENST00000469159 Q6ZN92 141 aa4.46□□□□□ -1.7
NCSTN-212ENST00000469159 TEX43Q6ZNM6 134 aa4.46□□□□□ -1.7
NCSTN-212ENST00000469159 FAM19A3Q7Z5A8 133 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms