RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 LINC00158P58513 81 aa11.07□□□□□ -0.64
TSPAN4-211ENST00000468468 SND1-IT1Q9HBX3 110 aa11.07□□□□□ -0.64
TSPAN4-211ENST00000468468 UQCRQO14949 82 aa11.06□□□□□ -0.64
TSPAN4-211ENST00000468468 LINC00337Q8N6G1 96 aa11.06□□□□□ -0.64
TSPAN4-211ENST00000468468 IGHV3OR16-9A0A0B4J2B5 98 aa11.05□□□□□ -0.64
TSPAN4-211ENST00000468468 ACYP1P07311 99 aa11.05□□□□□ -0.64
TSPAN4-211ENST00000468468 RPL28P46779 137 aaKnown RBP11.05□□□□□ -0.64
TSPAN4-211ENST00000468468 FAM222AQ5U5X8 452 aa11.05□□□□□ -0.64
TSPAN4-211ENST00000468468 IGKV2-28A0A075B6P5 120 aa11.05□□□□□ -0.64
TSPAN4-211ENST00000468468 IGKV2D-28P01615 120 aa11.05□□□□□ -0.64
TSPAN4-211ENST00000468468 LINC00526Q96FQ7 95 aa11.05□□□□□ -0.64
TSPAN4-211ENST00000468468 C5orf38Q86SI9 138 aa11.04□□□□□ -0.64
TSPAN4-211ENST00000468468 KIR2DL5BQ8NHK3 375 aa11.04□□□□□ -0.64
TSPAN4-211ENST00000468468 Q9HAA7 133 aa11.04□□□□□ -0.64
TSPAN4-211ENST00000468468 C22orf24Q9Y442 160 aa11.04□□□□□ -0.64
TSPAN4-211ENST00000468468 DEFB130BP0DP73 79 aa11.03□□□□□ -0.64
TSPAN4-211ENST00000468468 DEFB130AP0DP74 79 aa11.03□□□□□ -0.64
TSPAN4-211ENST00000468468 A0A087WZ39 114 aa11.02□□□□□ -0.64
TSPAN4-211ENST00000468468 hADV29S1A0JD25 119 aa11.02□□□□□ -0.64
TSPAN4-211ENST00000468468 CCL18P55774 89 aa11.02□□□□□ -0.64
TSPAN4-211ENST00000468468 PFN2P35080 140 aa11.02□□□□□ -0.65
TSPAN4-211ENST00000468468 FN1P02751 2386 aaKnown RBP11.01□□□□□ -0.65
TSPAN4-211ENST00000468468 GAGE2AQ6NT46 116 aa11.01□□□□□ -0.65
TSPAN4-211ENST00000468468 SMIM11BQ8TCY0 68 aa11.01□□□□□ -0.65
TSPAN4-211ENST00000468468 IBA57-AS1B1ANH7 110 aa11.01□□□□□ -0.65
TSPAN4-211ENST00000468468 LINC00959A0A1B0GUT2 108 aa11□□□□□ -0.65
TSPAN4-211ENST00000468468 NSD1Q96L73 2696 aaPredicted RBP11□□□□□ -0.65
TSPAN4-211ENST00000468468 A0A1B0GX51 115 aa11□□□□□ -0.65
TSPAN4-211ENST00000468468 MALP21145 153 aa11□□□□□ -0.65
TSPAN4-211ENST00000468468 OXTP01178 125 aa10.99□□□□□ -0.65
TSPAN4-211ENST00000468468 C11orf68Q9H3H3 251 aaKnown RBP10.99□□□□□ -0.65
TSPAN4-211ENST00000468468 COX7CP15954 63 aa10.99□□□□□ -0.65
TSPAN4-211ENST00000468468 C4orf26Q17RF5 130 aa10.99□□□□□ -0.65
TSPAN4-211ENST00000468468 OR13C6PQ8NH95 151 aa10.99□□□□□ -0.65
TSPAN4-211ENST00000468468 SPATA3Q8NHX4 192 aa10.99□□□□□ -0.65
TSPAN4-211ENST00000468468 C2orf48Q96LS8 159 aa10.99□□□□□ -0.65
TSPAN4-211ENST00000468468 HIVEP1P15822 2718 aa10.99□□□□□ -0.65
TSPAN4-211ENST00000468468 A0A087WYN8 130 aa10.98□□□□□ -0.65
TSPAN4-211ENST00000468468 WIPF1O43516 503 aa10.98□□□□□ -0.65
TSPAN4-211ENST00000468468 IMUPQ9GZP8 106 aa10.98□□□□□ -0.65
TSPAN4-211ENST00000468468 PAX4O43316 350 aa10.98□□□□□ -0.65
TSPAN4-211ENST00000468468 GYPEP15421 78 aa10.98□□□□□ -0.65
TSPAN4-211ENST00000468468 C6orf226Q5I0X4 101 aa10.98□□□□□ -0.65
TSPAN4-211ENST00000468468 LINC00482Q8N8I6 264 aa10.98□□□□□ -0.65
TSPAN4-211ENST00000468468 DNAL4O96015 105 aa10.97□□□□□ -0.65
TSPAN4-211ENST00000468468 INAFM2P0DMQ5 153 aa10.97□□□□□ -0.65
TSPAN4-211ENST00000468468 VWFP04275 2813 aa10.97□□□□□ -0.65
TSPAN4-211ENST00000468468 XCL1P47992 114 aa10.97□□□□□ -0.65
TSPAN4-211ENST00000468468 LINC00643Q86TS7 51 aa10.97□□□□□ -0.65
TSPAN4-211ENST00000468468 DSCR8Q96T75 97 aa10.97□□□□□ -0.65
TSPAN4-211ENST00000468468 H0YGX0 51 aa10.95□□□□□ -0.66
TSPAN4-211ENST00000468468 HRCT1Q6UXD1 115 aa10.95□□□□□ -0.66
TSPAN4-211ENST00000468468 ATP5G1P05496 136 aa10.95□□□□□ -0.66
TSPAN4-211ENST00000468468 SS18Q15532 418 aa10.95□□□□□ -0.66
TSPAN4-211ENST00000468468 CLPSL2Q6UWE3 100 aa10.94□□□□□ -0.66
TSPAN4-211ENST00000468468 LINC00612Q8N6U2 182 aa10.94□□□□□ -0.66
TSPAN4-211ENST00000468468 CRYGAP11844 174 aa10.94□□□□□ -0.66
TSPAN4-211ENST00000468468 TENM1Q9UKZ4 2725 aa10.93□□□□□ -0.66
TSPAN4-211ENST00000468468 A0A096LPF7 62 aa10.93□□□□□ -0.66
TSPAN4-211ENST00000468468 SDIM1Q6ZPB5 146 aa10.93□□□□□ -0.66
TSPAN4-211ENST00000468468 A0A1B0GUV1 79 aa10.92□□□□□ -0.66
TSPAN4-211ENST00000468468 LECT2O14960 151 aa10.92□□□□□ -0.66
TSPAN4-211ENST00000468468 DPH3Q96FX2 82 aa10.92□□□□□ -0.66
TSPAN4-211ENST00000468468 NBEAL2Q6ZNJ1 2754 aa10.92□□□□□ -0.66
TSPAN4-211ENST00000468468 C9orf129Q5T035 196 aaKnown RBP10.92□□□□□ -0.66
TSPAN4-211ENST00000468468 X6R8D5 127 aa10.91□□□□□ -0.66
TSPAN4-211ENST00000468468 RPS28P62857 69 aaKnown RBP10.91□□□□□ -0.66
TSPAN4-211ENST00000468468 Q8IZM0 81 aa10.91□□□□□ -0.66
TSPAN4-211ENST00000468468 PRO0255Q9UI72 69 aa10.91□□□□□ -0.66
TSPAN4-211ENST00000468468 C14orf132Q9NPU4 83 aa10.89□□□□□ -0.67
TSPAN4-211ENST00000468468 SLPIP03973 132 aa10.88□□□□□ -0.67
TSPAN4-211ENST00000468468 Q5XG85 94 aa10.88□□□□□ -0.67
TSPAN4-211ENST00000468468 A0A087WVE0 104 aa10.87□□□□□ -0.67
TSPAN4-211ENST00000468468 LINC00269Q8N2A0 174 aa10.86□□□□□ -0.67
TSPAN4-211ENST00000468468 ATRQ13535 2644 aa10.86□□□□□ -0.67
TSPAN4-211ENST00000468468 HIST1H4AP62805 103 aaKnown RBP10.86□□□□□ -0.67
TSPAN4-211ENST00000468468 C4orf48Q5BLP8 95 aa10.86□□□□□ -0.67
TSPAN4-211ENST00000468468 LINC01561Q8N1V8 128 aa10.86□□□□□ -0.67
TSPAN4-211ENST00000468468 OBSCN-AS1Q96MR7 158 aa10.86□□□□□ -0.67
TSPAN4-211ENST00000468468 IGKV3D-7A0A0C4DH55 119 aa10.85□□□□□ -0.67
TSPAN4-211ENST00000468468 ATOX1O00244 68 aa10.85□□□□□ -0.67
TSPAN4-211ENST00000468468 CXCL5P42830 114 aa10.85□□□□□ -0.67
TSPAN4-211ENST00000468468 PRR3P79522 188 aaKnown RBP10.85□□□□□ -0.67
TSPAN4-211ENST00000468468 NCR3O14931 201 aa10.85□□□□□ -0.67
TSPAN4-211ENST00000468468 C9orf66Q5T8R8 295 aa10.84□□□□□ -0.67
TSPAN4-211ENST00000468468 TRRAPQ9Y4A5 3859 aa10.84□□□□□ -0.67
TSPAN4-211ENST00000468468 DEFB4AO15263 64 aa10.84□□□□□ -0.67
TSPAN4-211ENST00000468468 IGLV10-54A0A075B6I4 117 aa10.83□□□□□ -0.68
TSPAN4-211ENST00000468468 CD164L2Q6UWJ8 174 aa10.83□□□□□ -0.68
TSPAN4-211ENST00000468468 ORMDL1Q9P0S3 153 aa10.83□□□□□ -0.68
TSPAN4-211ENST00000468468 KIAA0087Q14695 138 aa10.83□□□□□ -0.68
TSPAN4-211ENST00000468468 LYRM9A8MSI8 78 aa10.82□□□□□ -0.68
TSPAN4-211ENST00000468468 TMEM258P61165 79 aa10.82□□□□□ -0.68
TSPAN4-211ENST00000468468 Q8N3U1 123 aa10.82□□□□□ -0.68
TSPAN4-211ENST00000468468 CHCHD10Q8WYQ3 142 aaPredicted RBP10.82□□□□□ -0.68
TSPAN4-211ENST00000468468 ANGP03950 147 aaKnown RBP10.82□□□□□ -0.68
TSPAN4-211ENST00000468468 UPK3BQ9BT76 320 aa10.82□□□□□ -0.68
TSPAN4-211ENST00000468468 NANOS2P60321 138 aaKnown RBP10.82□□□□□ -0.68
TSPAN4-211ENST00000468468 RPL18AQ02543 176 aaKnown RBP10.82□□□□□ -0.68
TSPAN4-211ENST00000468468 TEP1Q99973 2627 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms