RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 Q6ZTC4 211 aa5.72□□□□□ -1.49
BRCA1-208ENST00000468300 TMEM141Q96I45 108 aa5.72□□□□□ -1.49
BRCA1-208ENST00000468300 AMELXQ99217 191 aa5.72□□□□□ -1.49
BRCA1-208ENST00000468300 MRPL35Q9NZE8 188 aaKnown RBP5.72□□□□□ -1.49
BRCA1-208ENST00000468300 A0A0J9YY99 117 aa5.72□□□□□ -1.49
BRCA1-208ENST00000468300 PRSS1P07477 247 aa5.71□□□□□ -1.5
BRCA1-208ENST00000468300 C15orf53Q8NAA6 179 aa5.71□□□□□ -1.5
BRCA1-208ENST00000468300 NANOS2P60321 138 aaKnown RBP5.71□□□□□ -1.5
BRCA1-208ENST00000468300 DNAH1Q9P2D7 4330 aa5.7□□□□□ -1.5
BRCA1-208ENST00000468300 TRBV6-8A0A0A6YYG3 113 aa5.7□□□□□ -1.5
BRCA1-208ENST00000468300 LINC01549A6NIU2 74 aa5.7□□□□□ -1.5
BRCA1-208ENST00000468300 A0A096LPF7 62 aa5.7□□□□□ -1.5
BRCA1-208ENST00000468300 TIMM21Q9BVV7 248 aa5.7□□□□□ -1.5
BRCA1-208ENST00000468300 F8VRH5 84 aa5.69□□□□□ -1.5
BRCA1-208ENST00000468300 RNASE13Q5GAN3 156 aaKnown RBP5.69□□□□□ -1.5
BRCA1-208ENST00000468300 TCL1BO95988 128 aa5.69□□□□□ -1.5
BRCA1-208ENST00000468300 MRPS36P82909 103 aaKnown RBP5.69□□□□□ -1.5
BRCA1-208ENST00000468300 IGKV2D-26A0A0A0MRZ7 120 aa5.68□□□□□ -1.5
BRCA1-208ENST00000468300 IGKCP01834 107 aa5.68□□□□□ -1.5
BRCA1-208ENST00000468300 B9D2Q9BPU9 175 aa5.68□□□□□ -1.5
BRCA1-208ENST00000468300 C11orf86A6NJI1 115 aa5.68□□□□□ -1.5
BRCA1-208ENST00000468300 HTN3P15516 51 aa5.68□□□□□ -1.5
BRCA1-208ENST00000468300 HERVK_113P61574 105 aa5.68□□□□□ -1.5
BRCA1-208ENST00000468300 IGLV4-60A0A075B6I1 120 aa5.68□□□□□ -1.5
BRCA1-208ENST00000468300 CRYGAP11844 174 aa5.68□□□□□ -1.5
BRCA1-208ENST00000468300 COX7CP15954 63 aa5.68□□□□□ -1.5
BRCA1-208ENST00000468300 RPL18AQ02543 176 aaKnown RBP5.68□□□□□ -1.5
BRCA1-208ENST00000468300 CDC42SE2Q9NRR3 84 aa5.68□□□□□ -1.5
BRCA1-208ENST00000468300 H3BNG1 76 aa5.67□□□□□ -1.5
BRCA1-208ENST00000468300 CEND1Q8N111 149 aa5.67□□□□□ -1.5
BRCA1-208ENST00000468300 TMEM243Q9BU79 118 aa5.67□□□□□ -1.5
BRCA1-208ENST00000468300 TRBV25-1A0A075B6N4 114 aa5.67□□□□□ -1.5
BRCA1-208ENST00000468300 H7C423 109 aa5.67□□□□□ -1.5
BRCA1-208ENST00000468300 SS18Q15532 418 aa5.67□□□□□ -1.5
BRCA1-208ENST00000468300 Q8N3U1 123 aa5.67□□□□□ -1.5
BRCA1-208ENST00000468300 PRO0461Q9UI25 63 aa5.67□□□□□ -1.5
BRCA1-208ENST00000468300 PLNP26678 52 aa5.66□□□□□ -1.5
BRCA1-208ENST00000468300 FAM19A3Q7Z5A8 133 aa5.66□□□□□ -1.5
BRCA1-208ENST00000468300 TEN1Q86WV5 123 aa5.66□□□□□ -1.5
BRCA1-208ENST00000468300 STARD9Q9P2P6 4700 aa5.66□□□□□ -1.5
BRCA1-208ENST00000468300 UBE2D1P51668 147 aa5.66□□□□□ -1.5
BRCA1-208ENST00000468300 A0A0J9YXV3 536 aa5.66□□□□□ -1.5
BRCA1-208ENST00000468300 K7ERJ3 54 aa5.66□□□□□ -1.5
BRCA1-208ENST00000468300 LYPD5Q6UWN5 251 aa5.66□□□□□ -1.5
BRCA1-208ENST00000468300 TRAV8-4A0A0B4J246 113 aa5.65□□□□□ -1.5
BRCA1-208ENST00000468300 PRYO14603 147 aa5.65□□□□□ -1.5
BRCA1-208ENST00000468300 NPC2P61916 151 aa5.65□□□□□ -1.5
BRCA1-208ENST00000468300 COX6A2Q02221 97 aa5.65□□□□□ -1.5
BRCA1-208ENST00000468300 C2orf91Q6ZV80 131 aa5.65□□□□□ -1.5
BRCA1-208ENST00000468300 DEFB131BA0A096LNP1 70 aa5.65□□□□□ -1.51
BRCA1-208ENST00000468300 H3BT86 120 aa5.65□□□□□ -1.51
BRCA1-208ENST00000468300 S100A7L2Q5SY68 101 aa5.65□□□□□ -1.51
BRCA1-208ENST00000468300 ICOSQ9Y6W8 199 aa5.65□□□□□ -1.51
BRCA1-208ENST00000468300 ZNF22P17026 224 aaPredicted RBP5.65□□□□□ -1.51
BRCA1-208ENST00000468300 TTTY13Q9BZ97 58 aa5.65□□□□□ -1.51
BRCA1-208ENST00000468300 HIGD1BQ9P298 99 aa5.65□□□□□ -1.51
BRCA1-208ENST00000468300 A0A1B0GUV1 79 aa5.64□□□□□ -1.51
BRCA1-208ENST00000468300 COX8AP10176 69 aa5.64□□□□□ -1.51
BRCA1-208ENST00000468300 Q6ZRU5 148 aa5.64□□□□□ -1.51
BRCA1-208ENST00000468300 PLECQ15149 4684 aaKnown RBP5.64□□□□□ -1.51
BRCA1-208ENST00000468300 IGLV5-45A0A087WSX0 123 aa5.64□□□□□ -1.51
BRCA1-208ENST00000468300 SMIM26A0A096LP01 95 aa5.64□□□□□ -1.51
BRCA1-208ENST00000468300 LINC00242Q5T6M2 205 aa5.64□□□□□ -1.51
BRCA1-208ENST00000468300 MAPKAPK5-AS1Q8N8E1 139 aa5.64□□□□□ -1.51
BRCA1-208ENST00000468300 TMEM223A0PJW6 202 aa5.63□□□□□ -1.51
BRCA1-208ENST00000468300 TSPEAR-AS2P59090 65 aa5.63□□□□□ -1.51
BRCA1-208ENST00000468300 NHP2Q9NX24 153 aaKnown RBP5.63□□□□□ -1.51
BRCA1-208ENST00000468300 E9PLD3 99 aa5.63□□□□□ -1.51
BRCA1-208ENST00000468300 ESRGQ1W209 222 aa5.63□□□□□ -1.51
BRCA1-208ENST00000468300 CHAC1Q9BUX1 264 aa5.63□□□□□ -1.51
BRCA1-208ENST00000468300 STAB2Q8WWQ8 2551 aa5.63□□□□□ -1.51
BRCA1-208ENST00000468300 CIRBPQ14011 172 aaKnown RBP5.63□□□□□ -1.51
BRCA1-208ENST00000468300 LELP1Q5T871 98 aa5.63□□□□□ -1.51
BRCA1-208ENST00000468300 IGLL5B9A064 214 aa5.62□□□□□ -1.51
BRCA1-208ENST00000468300 UBE2L6O14933 153 aa5.62□□□□□ -1.51
BRCA1-208ENST00000468300 FBN3Q75N90 2809 aa5.62□□□□□ -1.51
BRCA1-208ENST00000468300 TRAV10A0A0B4J240 114 aa5.62□□□□□ -1.51
BRCA1-208ENST00000468300 SCGB1C2P0DMR2 95 aa5.61□□□□□ -1.51
BRCA1-208ENST00000468300 SPANXDQ9BXN6 97 aa5.61□□□□□ -1.51
BRCA1-208ENST00000468300 J3QL48 77 aa5.61□□□□□ -1.51
BRCA1-208ENST00000468300 PRR15Q8IV56 129 aa5.61□□□□□ -1.51
BRCA1-208ENST00000468300 CDKN2A-AS1Q9UH64 79 aa5.61□□□□□ -1.51
BRCA1-208ENST00000468300 LAMTOR3Q9UHA4 124 aa5.61□□□□□ -1.51
BRCA1-208ENST00000468300 SMCPP49901 116 aaPredicted RBP5.6□□□□□ -1.51
BRCA1-208ENST00000468300 RBM3P98179 157 aaKnown RBP5.6□□□□□ -1.51
BRCA1-208ENST00000468300 WFDC10BQ8IUB3 73 aa5.6□□□□□ -1.51
BRCA1-208ENST00000468300 TMEM170BQ5T4T1 132 aa5.6□□□□□ -1.51
BRCA1-208ENST00000468300 TRAV8-3A0A0A6YYJ7 113 aa5.59□□□□□ -1.51
BRCA1-208ENST00000468300 LINC00959A0A1B0GUT2 108 aa5.59□□□□□ -1.51
BRCA1-208ENST00000468300 PSMB2P49721 201 aa5.59□□□□□ -1.51
BRCA1-208ENST00000468300 CYSTM1Q9H1C7 97 aa5.59□□□□□ -1.51
BRCA1-208ENST00000468300 PRR34Q9NV39 138 aa5.59□□□□□ -1.51
BRCA1-208ENST00000468300 SERP1Q9Y6X1 66 aa5.59□□□□□ -1.51
BRCA1-208ENST00000468300 IGHV3OR16-9A0A0B4J2B5 98 aa5.59□□□□□ -1.52
BRCA1-208ENST00000468300 IGLV5-39A0A0G2JS06 123 aa5.58□□□□□ -1.52
BRCA1-208ENST00000468300 TIMM17BO60830 172 aa5.58□□□□□ -1.52
BRCA1-208ENST00000468300 ENHOQ6UWT2 76 aa5.58□□□□□ -1.52
BRCA1-208ENST00000468300 LINC00269Q8N2A0 174 aa5.58□□□□□ -1.52
BRCA1-208ENST00000468300 IGHV3-64A0A075B6Q5 118 aa5.58□□□□□ -1.52
BRCA1-208ENST00000468300 SMIM1B2RUZ4 78 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 140.6 ms