RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 HERVK_113P63121 156 aa14.65□□□□□ -0.06
PTCH1-210ENST00000468211 TOMM6Q96B49 74 aa14.65□□□□□ -0.06
PTCH1-210ENST00000468211 TIMM17AQ99595 171 aa14.64□□□□□ -0.07
PTCH1-210ENST00000468211 ADCYAP1P18509 176 aa14.62□□□□□ -0.07
PTCH1-210ENST00000468211 GEMIN7Q9H840 131 aaKnown RBP14.62□□□□□ -0.07
PTCH1-210ENST00000468211 F8VRH5 84 aa14.61□□□□□ -0.07
PTCH1-210ENST00000468211 ZNF861PO60384 105 aa14.61□□□□□ -0.07
PTCH1-210ENST00000468211 SEC11AP67812 179 aa14.61□□□□□ -0.07
PTCH1-210ENST00000468211 PAPPA-AS1Q5QFB9 102 aa14.61□□□□□ -0.07
PTCH1-210ENST00000468211 SMIM1B2RUZ4 78 aa14.59□□□□□ -0.07
PTCH1-210ENST00000468211 G0S2P27469 103 aa14.58□□□□□ -0.08
PTCH1-210ENST00000468211 CLLU1Q5K131 121 aa14.58□□□□□ -0.08
PTCH1-210ENST00000468211 ERASQ7Z444 233 aa14.58□□□□□ -0.08
PTCH1-210ENST00000468211 SCGB3A1Q96QR1 104 aa14.58□□□□□ -0.08
PTCH1-210ENST00000468211 NUPR1O60356 82 aa14.56□□□□□ -0.08
PTCH1-210ENST00000468211 LBHQ53QV2 105 aaPredicted RBP14.56□□□□□ -0.08
PTCH1-210ENST00000468211 RPL13AP40429 203 aaKnown RBP14.55□□□□□ -0.08
PTCH1-210ENST00000468211 MRPL55Q7Z7F7 128 aaKnown RBP14.55□□□□□ -0.08
PTCH1-210ENST00000468211 CXCL5P42830 114 aa14.54□□□□□ -0.08
PTCH1-210ENST00000468211 TP73-AS1Q9UF72 201 aa14.54□□□□□ -0.08
PTCH1-210ENST00000468211 CARHSP1Q9Y2V2 147 aaKnown RBP14.54□□□□□ -0.08
PTCH1-210ENST00000468211 IGLV5-45A0A087WSX0 123 aa14.53□□□□□ -0.08
PTCH1-210ENST00000468211 TINCRA0A1B0GVN0 87 aa14.53□□□□□ -0.08
PTCH1-210ENST00000468211 LINC01546A6NGU7 62 aa14.53□□□□□ -0.08
PTCH1-210ENST00000468211 COX7B2Q8TF08 81 aa14.53□□□□□ -0.08
PTCH1-210ENST00000468211 TMEM218A2RU14 115 aa14.52□□□□□ -0.09
PTCH1-210ENST00000468211 PDZD11Q5EBL8 140 aa14.52□□□□□ -0.09
PTCH1-210ENST00000468211 TRAV9-1A0A075B6T8 112 aa14.51□□□□□ -0.09
PTCH1-210ENST00000468211 LINC00167Q96N53 147 aa14.51□□□□□ -0.09
PTCH1-210ENST00000468211 CST9LQ9H4G1 147 aa14.51□□□□□ -0.09
PTCH1-210ENST00000468211 RPL37AP8A6NKH3 93 aa14.5□□□□□ -0.09
PTCH1-210ENST00000468211 SPINK8P0C7L1 97 aa14.5□□□□□ -0.09
PTCH1-210ENST00000468211 PRR4Q16378 134 aa14.5□□□□□ -0.09
PTCH1-210ENST00000468211 BCE1O60756 84 aa14.49□□□□□ -0.09
PTCH1-210ENST00000468211 GNB1LQ9BYB4 327 aa14.49□□□□□ -0.09
PTCH1-210ENST00000468211 A0A087X002 238 aa14.48□□□□□ -0.09
PTCH1-210ENST00000468211 RAB5BP61020 215 aa14.48□□□□□ -0.09
PTCH1-210ENST00000468211 UQCC3Q6UW78 93 aa14.48□□□□□ -0.09
PTCH1-210ENST00000468211 GAGE10A6NGK3 116 aa14.47□□□□□ -0.09
PTCH1-210ENST00000468211 RPL28P46779 137 aaKnown RBP14.46□□□□□ -0.09
PTCH1-210ENST00000468211 IFITM2Q01629 132 aa14.46□□□□□ -0.09
PTCH1-210ENST00000468211 PMVKQ15126 192 aa14.45□□□□□ -0.1
PTCH1-210ENST00000468211 TSPAN13O95857 204 aa14.44□□□□□ -0.1
PTCH1-210ENST00000468211 IGLV5-37A0A075B6J1 123 aa14.43□□□□□ -0.1
PTCH1-210ENST00000468211 S100PP25815 95 aa14.43□□□□□ -0.1
PTCH1-210ENST00000468211 SEC11CQ9BY50 192 aa14.43□□□□□ -0.1
PTCH1-210ENST00000468211 LINC01549A6NIU2 74 aa14.42□□□□□ -0.1
PTCH1-210ENST00000468211 SCO1O75880 301 aa14.42□□□□□ -0.1
PTCH1-210ENST00000468211 MRPL18Q9H0U6 180 aaKnown RBP14.42□□□□□ -0.1
PTCH1-210ENST00000468211 ANAPC11Q9NYG5 84 aa14.42□□□□□ -0.1
PTCH1-210ENST00000468211 FA2HQ7L5A8 372 aa14.41□□□□□ -0.1
PTCH1-210ENST00000468211 KRTAP13-1Q8IUC0 172 aa14.41□□□□□ -0.1
PTCH1-210ENST00000468211 MUC2Q02817 5179 aa14.41□□□□□ -0.1
PTCH1-210ENST00000468211 FABP9Q0Z7S8 132 aa14.4□□□□□ -0.1
PTCH1-210ENST00000468211 A0A096LNJ9 63 aa14.39□□□□□ -0.11
PTCH1-210ENST00000468211 SMCO4Q9NRQ5 59 aa14.39□□□□□ -0.11
PTCH1-210ENST00000468211 IGLC3P0DOY3 106 aa14.37□□□□□ -0.11
PTCH1-210ENST00000468211 CRYGAP11844 174 aa14.37□□□□□ -0.11
PTCH1-210ENST00000468211 NKAPP1Q8N9T2 125 aa14.37□□□□□ -0.11
PTCH1-210ENST00000468211 TYMSOSQ8TAI1 123 aa14.37□□□□□ -0.11
PTCH1-210ENST00000468211 URB1-AS1Q96HZ7 61 aa14.37□□□□□ -0.11
PTCH1-210ENST00000468211 IGLV5-39A0A0G2JS06 123 aa14.36□□□□□ -0.11
PTCH1-210ENST00000468211 H3BRM9 83 aa14.36□□□□□ -0.11
PTCH1-210ENST00000468211 ATP5LO75964 103 aa14.36□□□□□ -0.11
PTCH1-210ENST00000468211 PFN2P35080 140 aa14.36□□□□□ -0.11
PTCH1-210ENST00000468211 COX19Q49B96 90 aa14.36□□□□□ -0.11
PTCH1-210ENST00000468211 KRTAP13-2Q52LG2 175 aa14.36□□□□□ -0.11
PTCH1-210ENST00000468211 IGKV2-28A0A075B6P5 120 aa14.35□□□□□ -0.11
PTCH1-210ENST00000468211 IGKV2D-28P01615 120 aa14.35□□□□□ -0.11
PTCH1-210ENST00000468211 ZNF22P17026 224 aaPredicted RBP14.34□□□□□ -0.11
PTCH1-210ENST00000468211 UBE2AP49459 152 aa14.33□□□□□ -0.12
PTCH1-210ENST00000468211 NDUFA6P56556 154 aa14.33□□□□□ -0.12
PTCH1-210ENST00000468211 C10orf91Q5T1B1 145 aa14.33□□□□□ -0.12
PTCH1-210ENST00000468211 COMMD7Q86VX2 200 aa14.33□□□□□ -0.12
PTCH1-210ENST00000468211 VPREB1P12018 145 aa14.31□□□□□ -0.12
PTCH1-210ENST00000468211 PMCHL1Q16048 86 aa14.31□□□□□ -0.12
PTCH1-210ENST00000468211 SND1-IT1Q9HBX3 110 aa14.31□□□□□ -0.12
PTCH1-210ENST00000468211 RPS10P5Q9NQ39 176 aa14.31□□□□□ -0.12
PTCH1-210ENST00000468211 Q8NDZ9 215 aa14.3□□□□□ -0.12
PTCH1-210ENST00000468211 C18orf32Q8TCD1 76 aa14.3□□□□□ -0.12
PTCH1-210ENST00000468211 ERG28Q9UKR5 140 aa14.3□□□□□ -0.12
PTCH1-210ENST00000468211 PRLHP81277 87 aa14.29□□□□□ -0.12
PTCH1-210ENST00000468211 TMEM238C9JI98 176 aa14.28□□□□□ -0.12
PTCH1-210ENST00000468211 RHEBQ15382 184 aa14.28□□□□□ -0.12
PTCH1-210ENST00000468211 ZNF625Q96I27 306 aaPredicted RBP14.28□□□□□ -0.12
PTCH1-210ENST00000468211 LINC00614P0C842 121 aa14.27□□□□□ -0.13
PTCH1-210ENST00000468211 C11orf86A6NJI1 115 aa14.26□□□□□ -0.13
PTCH1-210ENST00000468211 HBDP02042 147 aa14.26□□□□□ -0.13
PTCH1-210ENST00000468211 FAM229BQ4G0N7 80 aa14.25□□□□□ -0.13
PTCH1-210ENST00000468211 TMEM126AQ9H061 195 aa14.25□□□□□ -0.13
PTCH1-210ENST00000468211 TRAPPC1Q9Y5R8 145 aa14.25□□□□□ -0.13
PTCH1-210ENST00000468211 RETNLBQ9BQ08 111 aa14.24□□□□□ -0.13
PTCH1-210ENST00000468211 FAM19A1Q7Z5A9 133 aa14.23□□□□□ -0.13
PTCH1-210ENST00000468211 M0R378 163 aa14.22□□□□□ -0.13
PTCH1-210ENST00000468211 COX17Q14061 63 aa14.22□□□□□ -0.13
PTCH1-210ENST00000468211 BAGE3Q86Y29 109 aa14.22□□□□□ -0.13
PTCH1-210ENST00000468211 TMEM170BQ5T4T1 132 aa14.21□□□□□ -0.13
PTCH1-210ENST00000468211 LINC00304Q8N9R0 145 aa14.21□□□□□ -0.13
PTCH1-210ENST00000468211 RPL24P83731 157 aaKnown RBP14.2□□□□□ -0.14
PTCH1-210ENST00000468211 IGKV2D-26A0A0A0MRZ7 120 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms