RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 DNAJC9-AS1A6NH13 148 aa12.83□□□□□ -0.35
SNAPC3-205ENST00000467062 TRAV23DV6A0A075B6W5 121 aa12.83□□□□□ -0.36
SNAPC3-205ENST00000467062 SMIM26A0A096LP01 95 aa12.83□□□□□ -0.36
SNAPC3-205ENST00000467062 A0A087WYN8 130 aa12.82□□□□□ -0.36
SNAPC3-205ENST00000467062 HILS1P60008 231 aa12.82□□□□□ -0.36
SNAPC3-205ENST00000467062 ODF3L2Q3SX64 289 aa12.81□□□□□ -0.36
SNAPC3-205ENST00000467062 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.81□□□□□ -0.36
SNAPC3-205ENST00000467062 CCKP06307 115 aa12.81□□□□□ -0.36
SNAPC3-205ENST00000467062 LINC00467Q9BRT7 94 aa12.81□□□□□ -0.36
SNAPC3-205ENST00000467062 COX6A2Q02221 97 aa12.8□□□□□ -0.36
SNAPC3-205ENST00000467062 DGAT2L7PQ6IED9 249 aa12.8□□□□□ -0.36
SNAPC3-205ENST00000467062 C11orf72Q8NBR9 251 aa12.8□□□□□ -0.36
SNAPC3-205ENST00000467062 NCR3O14931 201 aa12.8□□□□□ -0.36
SNAPC3-205ENST00000467062 PIK3CD-AS1Q5SR53 167 aa12.8□□□□□ -0.36
SNAPC3-205ENST00000467062 H7BZZ5 65 aa12.79□□□□□ -0.36
SNAPC3-205ENST00000467062 FASNP49327 2511 aaKnown RBP12.79□□□□□ -0.36
SNAPC3-205ENST00000467062 IGHV3-53P01767 116 aa12.78□□□□□ -0.36
SNAPC3-205ENST00000467062 ANK3Q12955 4377 aaKnown RBP12.78□□□□□ -0.36
SNAPC3-205ENST00000467062 NBEAL2Q6ZNJ1 2754 aa12.78□□□□□ -0.36
SNAPC3-205ENST00000467062 TRBV10-3A0A0K0K1G6 114 aa12.78□□□□□ -0.36
SNAPC3-205ENST00000467062 WFDC10AQ9H1F0 79 aa12.78□□□□□ -0.36
SNAPC3-205ENST00000467062 C16orf95Q9H693 158 aa12.78□□□□□ -0.36
SNAPC3-205ENST00000467062 SMIM1B2RUZ4 78 aa12.77□□□□□ -0.36
SNAPC3-205ENST00000467062 CCL24O00175 119 aa12.77□□□□□ -0.36
SNAPC3-205ENST00000467062 BCE1O60756 84 aa12.77□□□□□ -0.36
SNAPC3-205ENST00000467062 A8MTW9 85 aa12.77□□□□□ -0.37
SNAPC3-205ENST00000467062 STHQ8IWL8 128 aa12.77□□□□□ -0.37
SNAPC3-205ENST00000467062 SMIM11BQ8TCY0 68 aa12.77□□□□□ -0.37
SNAPC3-205ENST00000467062 UNC79Q9P2D8 2635 aa12.77□□□□□ -0.37
SNAPC3-205ENST00000467062 LINC00242Q5T6M2 205 aa12.76□□□□□ -0.37
SNAPC3-205ENST00000467062 LINC00337Q8N6G1 96 aa12.76□□□□□ -0.37
SNAPC3-205ENST00000467062 V9GYY9 64 aa12.76□□□□□ -0.37
SNAPC3-205ENST00000467062 INSP01308 110 aa12.76□□□□□ -0.37
SNAPC3-205ENST00000467062 SEC61GP60059 68 aa12.76□□□□□ -0.37
SNAPC3-205ENST00000467062 HECTD1Q9ULT8 2610 aa12.76□□□□□ -0.37
SNAPC3-205ENST00000467062 LECT2O14960 151 aa12.76□□□□□ -0.37
SNAPC3-205ENST00000467062 C1orf158Q8N1D5 194 aa12.76□□□□□ -0.37
SNAPC3-205ENST00000467062 FN1P02751 2386 aaKnown RBP12.75□□□□□ -0.37
SNAPC3-205ENST00000467062 TRAV7A0A075B6U4 112 aa12.75□□□□□ -0.37
SNAPC3-205ENST00000467062 TRGV1A0A0A0MS02 117 aa12.75□□□□□ -0.37
SNAPC3-205ENST00000467062 LYPD5Q6UWN5 251 aa12.75□□□□□ -0.37
SNAPC3-205ENST00000467062 ENHOQ6UWT2 76 aa12.75□□□□□ -0.37
SNAPC3-205ENST00000467062 FAM19A1Q7Z5A9 133 aa12.75□□□□□ -0.37
SNAPC3-205ENST00000467062 WFDC9Q8NEX5 89 aa12.75□□□□□ -0.37
SNAPC3-205ENST00000467062 SND1-IT1Q9HBX3 110 aa12.74□□□□□ -0.37
SNAPC3-205ENST00000467062 ORMDL1Q9P0S3 153 aa12.74□□□□□ -0.37
SNAPC3-205ENST00000467062 FP248Q71RG6 208 aaPredicted RBP12.74□□□□□ -0.37
SNAPC3-205ENST00000467062 FAM19A3Q7Z5A8 133 aa12.74□□□□□ -0.37
SNAPC3-205ENST00000467062 PLA2G2AP14555 144 aa12.73□□□□□ -0.37
SNAPC3-205ENST00000467062 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
SNAPC3-205ENST00000467062 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
SNAPC3-205ENST00000467062 MIR7-3HGQ8N6C7 128 aa12.73□□□□□ -0.37
SNAPC3-205ENST00000467062 KLKP1Q107X0 134 aa12.72□□□□□ -0.37
SNAPC3-205ENST00000467062 Q6ZTI0 123 aa12.72□□□□□ -0.37
SNAPC3-205ENST00000467062 VWFP04275 2813 aa12.72□□□□□ -0.37
SNAPC3-205ENST00000467062 JMJD7-PLA2G4BH0Y9G9 81 aa12.72□□□□□ -0.37
SNAPC3-205ENST00000467062 C1orf195Q5TG92 126 aa12.72□□□□□ -0.37
SNAPC3-205ENST00000467062 LINC01006Q8NI28 216 aa12.71□□□□□ -0.37
SNAPC3-205ENST00000467062 RPL36AP83881 106 aaKnown RBP12.71□□□□□ -0.38
SNAPC3-205ENST00000467062 RPL36ALQ969Q0 106 aaKnown RBP12.71□□□□□ -0.38
SNAPC3-205ENST00000467062 UBL5Q9BZL1 73 aa12.7□□□□□ -0.38
SNAPC3-205ENST00000467062 GCN1Q92616 2671 aaKnown RBP12.7□□□□□ -0.38
SNAPC3-205ENST00000467062 HIVEP2P31629 2446 aa12.69□□□□□ -0.38
SNAPC3-205ENST00000467062 SMR3AQ99954 134 aa12.69□□□□□ -0.38
SNAPC3-205ENST00000467062 KRTAP1-1Q07627 177 aa12.68□□□□□ -0.38
SNAPC3-205ENST00000467062 NOP10Q9NPE3 64 aaKnown RBP12.68□□□□□ -0.38
SNAPC3-205ENST00000467062 SLPIP03973 132 aa12.68□□□□□ -0.38
SNAPC3-205ENST00000467062 BRK1Q8WUW1 75 aa12.68□□□□□ -0.38
SNAPC3-205ENST00000467062 SS18Q15532 418 aa12.67□□□□□ -0.38
SNAPC3-205ENST00000467062 GIG44P09565 113 aaPredicted RBP12.65□□□□□ -0.38
SNAPC3-205ENST00000467062 ATP5EP56381 51 aaPredicted RBP12.65□□□□□ -0.38
SNAPC3-205ENST00000467062 NDUFC1O43677 76 aa12.65□□□□□ -0.39
SNAPC3-205ENST00000467062 RBM3P98179 157 aaKnown RBP12.65□□□□□ -0.39
SNAPC3-205ENST00000467062 TRBV7-6A0A0J9YX20 115 aa12.64□□□□□ -0.39
SNAPC3-205ENST00000467062 F8WEM9 126 aa12.64□□□□□ -0.39
SNAPC3-205ENST00000467062 NTM-AS1Q6ZSK4 140 aa12.63□□□□□ -0.39
SNAPC3-205ENST00000467062 OTOGQ6ZRI0 2925 aa12.63□□□□□ -0.39
SNAPC3-205ENST00000467062 LOC100131303A0A0U1RQF7 123 aa12.63□□□□□ -0.39
SNAPC3-205ENST00000467062 A0A0U1RQV1 116 aa12.62□□□□□ -0.39
SNAPC3-205ENST00000467062 LINC00158P58513 81 aa12.62□□□□□ -0.39
SNAPC3-205ENST00000467062 RMI2Q96E14 147 aa12.61□□□□□ -0.39
SNAPC3-205ENST00000467062 SNURFQ9Y675 71 aa12.61□□□□□ -0.39
SNAPC3-205ENST00000467062 TMEM256-PLSCR3K7ERE1 68 aa12.61□□□□□ -0.39
SNAPC3-205ENST00000467062 CCL18P55774 89 aa12.61□□□□□ -0.39
SNAPC3-205ENST00000467062 LINC00167Q96N53 147 aa12.61□□□□□ -0.39
SNAPC3-205ENST00000467062 LINC00474Q9P2X8 69 aa12.6□□□□□ -0.39
SNAPC3-205ENST00000467062 COX7B2Q8TF08 81 aa12.6□□□□□ -0.39
SNAPC3-205ENST00000467062 IL17DQ8TAD2 202 aa12.59□□□□□ -0.39
SNAPC3-205ENST00000467062 TRGV2A0A075B6R0 118 aa12.59□□□□□ -0.39
SNAPC3-205ENST00000467062 TENM1Q9UKZ4 2725 aa12.58□□□□□ -0.4
SNAPC3-205ENST00000467062 K7EQD1 137 aa12.58□□□□□ -0.4
SNAPC3-205ENST00000467062 PAX4O43316 350 aa12.57□□□□□ -0.4
SNAPC3-205ENST00000467062 LINC00482Q8N8I6 264 aa12.57□□□□□ -0.4
SNAPC3-205ENST00000467062 IGKV3OR2-268A0A0C4DH90 116 aa12.56□□□□□ -0.4
SNAPC3-205ENST00000467062 PLAC8L1A1L4L8 177 aa12.56□□□□□ -0.4
SNAPC3-205ENST00000467062 RNASE1P07998 156 aaKnown RBP12.56□□□□□ -0.4
SNAPC3-205ENST00000467062 C19orf73Q9NVV2 129 aa12.56□□□□□ -0.4
SNAPC3-205ENST00000467062 CDC42SE2Q9NRR3 84 aa12.56□□□□□ -0.4
SNAPC3-205ENST00000467062 LY6G6DO95868 133 aa12.55□□□□□ -0.4
SNAPC3-205ENST00000467062 TRRAPQ9Y4A5 3859 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms