RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 CKS1BP61024 79 aa14.77□□□□□ -0.05
SUMO3-205ENST00000466861 C10orf25Q5T742 122 aa14.77□□□□□ -0.05
SUMO3-205ENST00000466861 TOMM7Q9P0U1 55 aa14.77□□□□□ -0.05
SUMO3-205ENST00000466861 C6orf48Q9UBA6 75 aa14.77□□□□□ -0.05
SUMO3-205ENST00000466861 FAT1Q14517 4588 aa14.76□□□□□ -0.05
SUMO3-205ENST00000466861 FAM19A2Q8N3H0 131 aa14.76□□□□□ -0.05
SUMO3-205ENST00000466861 STPG4Q8N801 248 aa14.75□□□□□ -0.05
SUMO3-205ENST00000466861 LEPROTL1O95214 131 aa14.74□□□□□ -0.05
SUMO3-205ENST00000466861 C2orf82Q6UX34 121 aa14.74□□□□□ -0.05
SUMO3-205ENST00000466861 CHTOPQ9Y3Y2 248 aaKnown RBP14.74□□□□□ -0.05
SUMO3-205ENST00000466861 HIST1H2BKO60814 126 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 HIST1H2BJP06899 126 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 ZNF22P17026 224 aaPredicted RBP14.73□□□□□ -0.05
SUMO3-205ENST00000466861 HIST1H2BOP23527 126 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 HIST1H2BBP33778 126 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 HIST1H2BDP58876 126 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 HIST1H2BCP62807 126 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 GAGE2BQ13066 116 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 HIST2H2BEQ16778 126 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.73□□□□□ -0.05
SUMO3-205ENST00000466861 COX7B2Q8TF08 81 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 HIST1H2BHQ93079 126 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 HIST1H2BNQ99877 126 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 HIST1H2BMQ99879 126 aa14.73□□□□□ -0.05
SUMO3-205ENST00000466861 F8VRH5 84 aa14.72□□□□□ -0.05
SUMO3-205ENST00000466861 RPL18AQ02543 176 aaKnown RBP14.72□□□□□ -0.05
SUMO3-205ENST00000466861 HSPB8Q9UJY1 196 aa14.72□□□□□ -0.05
SUMO3-205ENST00000466861 IGLV5-39A0A0G2JS06 123 aa14.71□□□□□ -0.05
SUMO3-205ENST00000466861 C11orf86A6NJI1 115 aa14.71□□□□□ -0.05
SUMO3-205ENST00000466861 SPINK8P0C7L1 97 aa14.71□□□□□ -0.05
SUMO3-205ENST00000466861 NDUFC2-KCTD14E9PQ53 114 aa14.7□□□□□ -0.06
SUMO3-205ENST00000466861 VPS13BQ7Z7G8 4022 aa14.7□□□□□ -0.06
SUMO3-205ENST00000466861 NUPR1O60356 82 aa14.69□□□□□ -0.06
SUMO3-205ENST00000466861 Q6ZRP5 223 aa14.69□□□□□ -0.06
SUMO3-205ENST00000466861 C7orf33Q8WU49 177 aa14.68□□□□□ -0.06
SUMO3-205ENST00000466861 ATP6V1G1O75348 118 aa14.67□□□□□ -0.06
SUMO3-205ENST00000466861 INAFM2P0DMQ5 153 aa14.67□□□□□ -0.06
SUMO3-205ENST00000466861 RPL37AP61513 92 aaKnown RBP14.67□□□□□ -0.06
SUMO3-205ENST00000466861 TMEM170BQ5T4T1 132 aa14.67□□□□□ -0.06
SUMO3-205ENST00000466861 KRTAP10-4P60372 401 aaPredicted RBP14.65□□□□□ -0.06
SUMO3-205ENST00000466861 SFTA2Q6UW10 78 aa14.65□□□□□ -0.06
SUMO3-205ENST00000466861 ODF1Q14990 250 aa14.64□□□□□ -0.07
SUMO3-205ENST00000466861 C9orf116Q5BN46 136 aaPredicted RBP14.64□□□□□ -0.07
SUMO3-205ENST00000466861 COA6Q5JTJ3 125 aaKnown RBP14.64□□□□□ -0.07
SUMO3-205ENST00000466861 A0A1W2PNN7 141 aa14.62□□□□□ -0.07
SUMO3-205ENST00000466861 TMEM223A0PJW6 202 aa14.61□□□□□ -0.07
SUMO3-205ENST00000466861 FABP4P15090 132 aa14.61□□□□□ -0.07
SUMO3-205ENST00000466861 GAGE2EQ4V326 116 aa14.61□□□□□ -0.07
SUMO3-205ENST00000466861 GAGE2DQ9UEU5 116 aa14.61□□□□□ -0.07
SUMO3-205ENST00000466861 ABCA13Q86UQ4 5058 aa14.61□□□□□ -0.07
SUMO3-205ENST00000466861 MAP1LC3CQ9BXW4 147 aa14.6□□□□□ -0.07
SUMO3-205ENST00000466861 SRRM2Q9UQ35 2752 aaKnown RBP14.6□□□□□ -0.07
SUMO3-205ENST00000466861 PCLOQ9Y6V0 5065 aa14.6□□□□□ -0.07
SUMO3-205ENST00000466861 PLNP26678 52 aa14.59□□□□□ -0.07
SUMO3-205ENST00000466861 H0Y8G0 127 aa14.56□□□□□ -0.08
SUMO3-205ENST00000466861 C9orf129Q5T035 196 aaKnown RBP14.55□□□□□ -0.08
SUMO3-205ENST00000466861 DPM2O94777 84 aa14.54□□□□□ -0.08
SUMO3-205ENST00000466861 COX17Q14061 63 aa14.54□□□□□ -0.08
SUMO3-205ENST00000466861 FLG2Q5D862 2391 aaPredicted RBP14.54□□□□□ -0.08
SUMO3-205ENST00000466861 ZNF625Q96I27 306 aaPredicted RBP14.52□□□□□ -0.09
SUMO3-205ENST00000466861 SYS1-DBNDD2H3BUS1 97 aa14.51□□□□□ -0.09
SUMO3-205ENST00000466861 PRR3P79522 188 aaKnown RBP14.51□□□□□ -0.09
SUMO3-205ENST00000466861 FAM168BA1KXE4 195 aa14.5□□□□□ -0.09
SUMO3-205ENST00000466861 IGKCP01834 107 aa14.5□□□□□ -0.09
SUMO3-205ENST00000466861 ERG28Q9UKR5 140 aa14.5□□□□□ -0.09
SUMO3-205ENST00000466861 PLA2G2DQ9UNK4 145 aa14.5□□□□□ -0.09
SUMO3-205ENST00000466861 FAM19A5Q7Z5A7 132 aaPredicted RBP14.49□□□□□ -0.09
SUMO3-205ENST00000466861 KRTAP7-1Q8IUC3 87 aa14.49□□□□□ -0.09
SUMO3-205ENST00000466861 XAGE1AQ9HD64 81 aa14.49□□□□□ -0.09
SUMO3-205ENST00000466861 HERVK_113P61574 105 aa14.48□□□□□ -0.09
SUMO3-205ENST00000466861 HERV-K104P63124 156 aa14.48□□□□□ -0.09
SUMO3-205ENST00000466861 PET117Q6UWS5 81 aa14.48□□□□□ -0.09
SUMO3-205ENST00000466861 PHF5AQ7RTV0 110 aaKnown RBP14.48□□□□□ -0.09
SUMO3-205ENST00000466861 M0QXV9 152 aa14.47□□□□□ -0.09
SUMO3-205ENST00000466861 PLEKHB2Q96CS7 222 aa14.47□□□□□ -0.09
SUMO3-205ENST00000466861 TP73-AS1Q9UF72 201 aa14.47□□□□□ -0.09
SUMO3-205ENST00000466861 LINC00587B1AMM8 73 aa14.45□□□□□ -0.1
SUMO3-205ENST00000466861 LEPROTO15243 131 aa14.45□□□□□ -0.1
SUMO3-205ENST00000466861 LINC01545Q5VT33 79 aa14.45□□□□□ -0.1
SUMO3-205ENST00000466861 PMCHL2Q9BQD1 86 aa14.45□□□□□ -0.1
SUMO3-205ENST00000466861 PFN2P35080 140 aa14.44□□□□□ -0.1
SUMO3-205ENST00000466861 LBHQ53QV2 105 aaPredicted RBP14.44□□□□□ -0.1
SUMO3-205ENST00000466861 SERTAD4-AS1Q5TG53 156 aa14.43□□□□□ -0.1
SUMO3-205ENST00000466861 NDUFA12Q9UI09 145 aa14.43□□□□□ -0.1
SUMO3-205ENST00000466861 IGLV5-37A0A075B6J1 123 aa14.42□□□□□ -0.1
SUMO3-205ENST00000466861 MYMXA0A1B0GTQ4 84 aa14.42□□□□□ -0.1
SUMO3-205ENST00000466861 HNRNPA3P51991 378 aaKnown RBP14.42□□□□□ -0.1
SUMO3-205ENST00000466861 PSORS1C2Q9UIG4 136 aa14.42□□□□□ -0.1
SUMO3-205ENST00000466861 C3orf79P0CE67 100 aa14.41□□□□□ -0.1
SUMO3-205ENST00000466861 C22orf24Q9Y442 160 aa14.41□□□□□ -0.1
SUMO3-205ENST00000466861 KRTAP29-1A8MX34 341 aaPredicted RBP14.4□□□□□ -0.1
SUMO3-205ENST00000466861 NMUP48645 174 aa14.4□□□□□ -0.1
SUMO3-205ENST00000466861 SND1-IT1Q9HBX3 110 aa14.4□□□□□ -0.1
SUMO3-205ENST00000466861 PKHD1L1Q86WI1 4243 aa14.39□□□□□ -0.11
SUMO3-205ENST00000466861 J3QQQ9 107 aa14.39□□□□□ -0.11
SUMO3-205ENST00000466861 OXTP01178 125 aa14.39□□□□□ -0.11
SUMO3-205ENST00000466861 UBE2BP63146 152 aa14.39□□□□□ -0.11
SUMO3-205ENST00000466861 E9PLD3 99 aa14.38□□□□□ -0.11
SUMO3-205ENST00000466861 AKR1D1P51857 326 aa14.38□□□□□ -0.11
SUMO3-205ENST00000466861 SPINK6Q6UWN8 80 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms