RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 MANBALQ9NQG1 85 aa-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 LINC00846Q9NV44 126 aa-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 PRO1854Q9UHT4 67 aa-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 TCHHQ07283 1943 aa-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 CC2D2AQ9P2K1 1620 aa-0.47□□□□□ -2.48
NUCKS1-202ENST00000464938 CHD1O14646 1710 aa-0.47□□□□□ -2.49
NUCKS1-202ENST00000464938 STAB2Q8WWQ8 2551 aa-0.48□□□□□ -2.49
NUCKS1-202ENST00000464938 NAP1L6A6NFF2 107 aa-0.48□□□□□ -2.49
NUCKS1-202ENST00000464938 M0R2T5 61 aa-0.48□□□□□ -2.49
NUCKS1-202ENST00000464938 SAA2P0DJI9 122 aaPredicted RBP-0.48□□□□□ -2.49
NUCKS1-202ENST00000464938 PPP3R1P63098 170 aa-0.48□□□□□ -2.49
NUCKS1-202ENST00000464938 DEFB105AQ8NG35 78 aa-0.48□□□□□ -2.49
NUCKS1-202ENST00000464938 NLRP1Q9C000 1473 aa-0.48□□□□□ -2.49
NUCKS1-202ENST00000464938 LOC730098B7Z3J9 87 aa-0.49□□□□□ -2.49
NUCKS1-202ENST00000464938 KLK9Q2XQG4 91 aa-0.49□□□□□ -2.49
NUCKS1-202ENST00000464938 SVBPQ8N300 66 aa-0.49□□□□□ -2.49
NUCKS1-202ENST00000464938 FAM135AQ9P2D6 1515 aa-0.49□□□□□ -2.49
NUCKS1-202ENST00000464938 CNOT1A5YKK6 2376 aaKnown RBP-0.5□□□□□ -2.49
NUCKS1-202ENST00000464938 A0A1B0GWA3 101 aa-0.5□□□□□ -2.49
NUCKS1-202ENST00000464938 LINC00587B1AMM8 73 aa-0.5□□□□□ -2.49
NUCKS1-202ENST00000464938 TRAPPC2P0DI81 140 aa-0.5□□□□□ -2.49
NUCKS1-202ENST00000464938 TRAPPC2BP0DI82 140 aa-0.5□□□□□ -2.49
NUCKS1-202ENST00000464938 SFTA2Q6UW10 78 aa-0.5□□□□□ -2.49
NUCKS1-202ENST00000464938 USMG5Q96IX5 58 aa-0.5□□□□□ -2.49
NUCKS1-202ENST00000464938 EDC4Q6P2E9 1401 aaKnown RBP-0.5□□□□□ -2.49
NUCKS1-202ENST00000464938 NKTRP30414 1462 aaKnown RBP-0.5□□□□□ -2.49
NUCKS1-202ENST00000464938 ABCC5O15440 1437 aa-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 SLIT1O75093 1534 aa-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 COX8AP10176 69 aa-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 SPRR2AP35326 72 aa-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 FDCSPQ8NFU4 85 aa-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 TMEM203Q969S6 136 aa-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 PCNX1Q96RV3 2341 aa-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 C12orf57Q99622 126 aa-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 PAPPA2Q9BXP8 1791 aa-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 FXYD6Q9H0Q3 95 aa-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 FMN2Q9NZ56 1722 aa-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 MARF1Q9Y4F3 1742 aaKnown RBP-0.51□□□□□ -2.49
NUCKS1-202ENST00000464938 SVEP1Q4LDE5 3571 aa-0.52□□□□□ -2.49
NUCKS1-202ENST00000464938 ZFYVE16Q7Z3T8 1539 aa-0.52□□□□□ -2.49
NUCKS1-202ENST00000464938 NBEAL1Q6ZS30 2694 aa-0.52□□□□□ -2.49
NUCKS1-202ENST00000464938 CRYM-AS1A6NIL9 109 aa-0.52□□□□□ -2.49
NUCKS1-202ENST00000464938 SYS1-DBNDD2H3BUS1 97 aa-0.52□□□□□ -2.49
NUCKS1-202ENST00000464938 KRTAP6-2Q3LI66 62 aa-0.52□□□□□ -2.49
NUCKS1-202ENST00000464938 CGREF1Q99674 301 aa-0.52□□□□□ -2.49
NUCKS1-202ENST00000464938 TARBP1Q13395 1621 aaKnown RBP-0.53□□□□□ -2.49
NUCKS1-202ENST00000464938 LAMA5O15230 3695 aa-0.53□□□□□ -2.49
NUCKS1-202ENST00000464938 A0A087WVE0 104 aa-0.53□□□□□ -2.49
NUCKS1-202ENST00000464938 hADV29S1A0JD25 119 aa-0.53□□□□□ -2.49
NUCKS1-202ENST00000464938 TMEM262E9PQX1 116 aa-0.53□□□□□ -2.49
NUCKS1-202ENST00000464938 S100A1P23297 94 aa-0.53□□□□□ -2.49
NUCKS1-202ENST00000464938 SEC11AP67812 179 aa-0.53□□□□□ -2.49
NUCKS1-202ENST00000464938 KIAA1551Q9HCM1 1747 aa-0.53□□□□□ -2.49
NUCKS1-202ENST00000464938 PRDM15P57071 1507 aaPredicted RBP-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 CCDC141Q6ZP82 1450 aa-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 HERC1Q15751 4861 aa-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 ABCA3Q99758 1704 aa-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 KRTDAPP60985 99 aa-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 MRPS10P82664 201 aaKnown RBP-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 SARNPP82979 210 aaKnown RBP-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 HSD52Q0P140 79 aa-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 C6orf201Q7Z4U5 140 aa-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 GNG8Q9UK08 70 aa-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 SHPRHQ149N8 1683 aa-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 KMT2CQ8NEZ4 4911 aaKnown RBP-0.54□□□□□ -2.5
NUCKS1-202ENST00000464938 NCOA3Q9Y6Q9 1424 aa-0.55□□□□□ -2.5
NUCKS1-202ENST00000464938 LRRC37AA6NMS7 1700 aa-0.55□□□□□ -2.5
NUCKS1-202ENST00000464938 SETD2Q9BYW2 2564 aaPredicted RBP-0.55□□□□□ -2.5
NUCKS1-202ENST00000464938 A0A1B0GU69 56 aa-0.55□□□□□ -2.5
NUCKS1-202ENST00000464938 CPSF4LA6NMK7 179 aaKnown RBP-0.55□□□□□ -2.5
NUCKS1-202ENST00000464938 SNCAP37840 140 aa-0.55□□□□□ -2.5
NUCKS1-202ENST00000464938 APLNQ9ULZ1 77 aa-0.55□□□□□ -2.5
NUCKS1-202ENST00000464938 PKD1P98161 4303 aa-0.55□□□□□ -2.5
NUCKS1-202ENST00000464938 PDCD11Q14690 1871 aaKnown RBP-0.56□□□□□ -2.5
NUCKS1-202ENST00000464938 TRBV25-1A0A075B6N4 114 aa-0.56□□□□□ -2.5
NUCKS1-202ENST00000464938 H1FX-AS1Q4G0G2 97 aa-0.56□□□□□ -2.5
NUCKS1-202ENST00000464938 MLH3Q9UHC1 1453 aa-0.56□□□□□ -2.5
NUCKS1-202ENST00000464938 CUX1P39880 1505 aa-0.57□□□□□ -2.5
NUCKS1-202ENST00000464938 C7orf77A4D0Y5 90 aa-0.57□□□□□ -2.5
NUCKS1-202ENST00000464938 H0Y9P7 68 aa-0.57□□□□□ -2.5
NUCKS1-202ENST00000464938 H3BQF6 201 aa-0.57□□□□□ -2.5
NUCKS1-202ENST00000464938 H7BZZ5 65 aa-0.57□□□□□ -2.5
NUCKS1-202ENST00000464938 NDUFC1O43677 76 aa-0.57□□□□□ -2.5
NUCKS1-202ENST00000464938 SPRR2EP22531 72 aa-0.57□□□□□ -2.5
NUCKS1-202ENST00000464938 GTF2H5Q6ZYL4 71 aa-0.57□□□□□ -2.5
NUCKS1-202ENST00000464938 CRIPTQ9P021 101 aa-0.57□□□□□ -2.5
NUCKS1-202ENST00000464938 CACFD1Q9UGQ2 172 aa-0.57□□□□□ -2.5
NUCKS1-202ENST00000464938 KNDC1Q76NI1 1749 aa-0.58□□□□□ -2.5
NUCKS1-202ENST00000464938 TGP01266 2768 aa-0.58□□□□□ -2.5
NUCKS1-202ENST00000464938 NRXN1Q9ULB1 1477 aa-0.58□□□□□ -2.5
NUCKS1-202ENST00000464938 A0A0G2JND7 137 aa-0.58□□□□□ -2.5
NUCKS1-202ENST00000464938 DEFB135Q30KP9 77 aa-0.58□□□□□ -2.5
NUCKS1-202ENST00000464938 SAMD9Q5K651 1589 aa-0.58□□□□□ -2.5
NUCKS1-202ENST00000464938 MPC2O95563 127 aa-0.59□□□□□ -2.5
NUCKS1-202ENST00000464938 ASIPP42127 132 aa-0.59□□□□□ -2.5
NUCKS1-202ENST00000464938 KRTAP19-8Q3LI54 63 aa-0.59□□□□□ -2.5
NUCKS1-202ENST00000464938 PSMG4Q5JS54 123 aa-0.59□□□□□ -2.5
NUCKS1-202ENST00000464938 DEFB107AQ8IZN7 70 aa-0.59□□□□□ -2.5
NUCKS1-202ENST00000464938 ADAMTS12P58397 1594 aa-0.59□□□□□ -2.5
NUCKS1-202ENST00000464938 PCLOQ9Y6V0 5065 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms