RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 CKS1BP61024 79 aa15.83■□□□□ 0.12
U2AF1-206ENST00000464750 KRTAP11-1Q8IUC1 163 aa15.83■□□□□ 0.12
U2AF1-206ENST00000464750 KRTAP7-1Q8IUC3 87 aa15.83■□□□□ 0.12
U2AF1-206ENST00000464750 Q8IZM0 81 aa15.83■□□□□ 0.12
U2AF1-206ENST00000464750 SCGB3A1Q96QR1 104 aa15.83■□□□□ 0.12
U2AF1-206ENST00000464750 CDKN2A-AS1Q9UH64 79 aa15.83■□□□□ 0.12
U2AF1-206ENST00000464750 ERASQ7Z444 233 aa15.82■□□□□ 0.12
U2AF1-206ENST00000464750 ALKBH7Q9BT30 221 aaPredicted RBP15.82■□□□□ 0.12
U2AF1-206ENST00000464750 C6orf226Q5I0X4 101 aa15.81■□□□□ 0.12
U2AF1-206ENST00000464750 C9orf129Q5T035 196 aaKnown RBP15.81■□□□□ 0.12
U2AF1-206ENST00000464750 IGLV7-43P04211 117 aa15.8■□□□□ 0.12
U2AF1-206ENST00000464750 COX19Q49B96 90 aa15.79■□□□□ 0.12
U2AF1-206ENST00000464750 LINC01546A6NGU7 62 aa15.78■□□□□ 0.12
U2AF1-206ENST00000464750 UBE2BP63146 152 aa15.78■□□□□ 0.12
U2AF1-206ENST00000464750 LINC00469Q8N7U9 141 aa15.77■□□□□ 0.12
U2AF1-206ENST00000464750 MRPL18Q9H0U6 180 aaKnown RBP15.77■□□□□ 0.12
U2AF1-206ENST00000464750 LINC01549A6NIU2 74 aa15.76■□□□□ 0.11
U2AF1-206ENST00000464750 RHEBQ15382 184 aa15.76■□□□□ 0.11
U2AF1-206ENST00000464750 C10orf91Q5T1B1 145 aa15.76■□□□□ 0.11
U2AF1-206ENST00000464750 FABP9Q0Z7S8 132 aa15.75■□□□□ 0.11
U2AF1-206ENST00000464750 FA2HQ7L5A8 372 aa15.75■□□□□ 0.11
U2AF1-206ENST00000464750 DIRC1Q969H9 104 aa15.75■□□□□ 0.11
U2AF1-206ENST00000464750 RPS10P5Q9NQ39 176 aa15.75■□□□□ 0.11
U2AF1-206ENST00000464750 CARHSP1Q9Y2V2 147 aaKnown RBP15.75■□□□□ 0.11
U2AF1-206ENST00000464750 F8VRH5 84 aa15.74■□□□□ 0.11
U2AF1-206ENST00000464750 SMCO4Q9NRQ5 59 aa15.74■□□□□ 0.11
U2AF1-206ENST00000464750 LRP2P98164 4655 aa15.73■□□□□ 0.11
U2AF1-206ENST00000464750 TINCRA0A1B0GVN0 87 aa15.73■□□□□ 0.11
U2AF1-206ENST00000464750 SMIM1B2RUZ4 78 aa15.73■□□□□ 0.11
U2AF1-206ENST00000464750 CXCL5P42830 114 aa15.73■□□□□ 0.11
U2AF1-206ENST00000464750 XAGE1AQ9HD64 81 aa15.72■□□□□ 0.11
U2AF1-206ENST00000464750 IGLV5-45A0A087WSX0 123 aa15.71■□□□□ 0.11
U2AF1-206ENST00000464750 CST9LQ9H4G1 147 aa15.71■□□□□ 0.11
U2AF1-206ENST00000464750 H0Y9J4 135 aa15.7■□□□□ 0.1
U2AF1-206ENST00000464750 PDZD11Q5EBL8 140 aa15.69■□□□□ 0.1
U2AF1-206ENST00000464750 COX7B2Q8TF08 81 aa15.69■□□□□ 0.1
U2AF1-206ENST00000464750 PMVKQ15126 192 aa15.68■□□□□ 0.1
U2AF1-206ENST00000464750 SPINK8P0C7L1 97 aa15.66■□□□□ 0.1
U2AF1-206ENST00000464750 C22orf24Q9Y442 160 aa15.66■□□□□ 0.1
U2AF1-206ENST00000464750 PRR26Q8N8Z3 221 aa15.64■□□□□ 0.09
U2AF1-206ENST00000464750 TRAPPC1Q9Y5R8 145 aa15.63■□□□□ 0.09
U2AF1-206ENST00000464750 LBHQ53QV2 105 aaPredicted RBP15.62■□□□□ 0.09
U2AF1-206ENST00000464750 A0A096LNJ9 63 aa15.61■□□□□ 0.09
U2AF1-206ENST00000464750 C18orf32Q8TCD1 76 aa15.61■□□□□ 0.09
U2AF1-206ENST00000464750 URB1-AS1Q96HZ7 61 aa15.61■□□□□ 0.09
U2AF1-206ENST00000464750 H3BRM9 83 aa15.6■□□□□ 0.09
U2AF1-206ENST00000464750 APOC3P02656 99 aa15.59■□□□□ 0.09
U2AF1-206ENST00000464750 TP73-AS1Q9UF72 201 aa15.59■□□□□ 0.09
U2AF1-206ENST00000464750 NUPR1O60356 82 aa15.58■□□□□ 0.08
U2AF1-206ENST00000464750 HBDP02042 147 aa15.58■□□□□ 0.08
U2AF1-206ENST00000464750 KRTAP1-4P0C5Y4 121 aa15.58■□□□□ 0.08
U2AF1-206ENST00000464750 IGLC3P0DOY3 106 aa15.58■□□□□ 0.08
U2AF1-206ENST00000464750 NDUFA6P56556 154 aa15.58■□□□□ 0.08
U2AF1-206ENST00000464750 MRPL55Q7Z7F7 128 aaKnown RBP15.58■□□□□ 0.08
U2AF1-206ENST00000464750 LINC00614P0C842 121 aa15.57■□□□□ 0.08
U2AF1-206ENST00000464750 IGLV1-50A0A075B6I6 118 aa15.56■□□□□ 0.08
U2AF1-206ENST00000464750 PMCHL1Q16048 86 aa15.56■□□□□ 0.08
U2AF1-206ENST00000464750 ZNF861PO60384 105 aa15.55■□□□□ 0.08
U2AF1-206ENST00000464750 RAB5BP61020 215 aa15.55■□□□□ 0.08
U2AF1-206ENST00000464750 NDUFA5Q16718 116 aa15.55■□□□□ 0.08
U2AF1-206ENST00000464750 ATP5LO75964 103 aa15.54■□□□□ 0.08
U2AF1-206ENST00000464750 SNAPINO95295 136 aa15.54■□□□□ 0.08
U2AF1-206ENST00000464750 ZNF22P17026 224 aaPredicted RBP15.54■□□□□ 0.08
U2AF1-206ENST00000464750 SVBPQ8N300 66 aa15.53■□□□□ 0.08
U2AF1-206ENST00000464750 IGLV5-39A0A0G2JS06 123 aa15.52■□□□□ 0.08
U2AF1-206ENST00000464750 LINC00167Q96N53 147 aa15.5■□□□□ 0.07
U2AF1-206ENST00000464750 IGLV5-37A0A075B6J1 123 aa15.48■□□□□ 0.07
U2AF1-206ENST00000464750 GAGE10A6NGK3 116 aa15.48■□□□□ 0.07
U2AF1-206ENST00000464750 RPL37AP8A6NKH3 93 aa15.48■□□□□ 0.07
U2AF1-206ENST00000464750 BCE1O60756 84 aa15.48■□□□□ 0.07
U2AF1-206ENST00000464750 PFN2P35080 140 aa15.47■□□□□ 0.07
U2AF1-206ENST00000464750 RPL13AP40429 203 aaKnown RBP15.47■□□□□ 0.07
U2AF1-206ENST00000464750 BAGE3Q86Y29 109 aa15.47■□□□□ 0.07
U2AF1-206ENST00000464750 NKAPP1Q8N9T2 125 aa15.47■□□□□ 0.07
U2AF1-206ENST00000464750 C11orf86A6NJI1 115 aa15.46■□□□□ 0.07
U2AF1-206ENST00000464750 RNF213Q63HN8 5207 aa15.45■□□□□ 0.06
U2AF1-206ENST00000464750 RPL28P46779 137 aaKnown RBP15.45■□□□□ 0.06
U2AF1-206ENST00000464750 TMEM170BQ5T4T1 132 aa15.43■□□□□ 0.06
U2AF1-206ENST00000464750 YPEL4Q96NS1 127 aa15.43■□□□□ 0.06
U2AF1-206ENST00000464750 ERG28Q9UKR5 140 aa15.43■□□□□ 0.06
U2AF1-206ENST00000464750 LPAP08519 4548 aa15.4■□□□□ 0.06
U2AF1-206ENST00000464750 SCO1O75880 301 aa15.4■□□□□ 0.06
U2AF1-206ENST00000464750 ZNF625Q96I27 306 aaPredicted RBP15.4■□□□□ 0.06
U2AF1-206ENST00000464750 SND1-IT1Q9HBX3 110 aa15.4■□□□□ 0.06
U2AF1-206ENST00000464750 CHTOPQ9Y3Y2 248 aaKnown RBP15.39■□□□□ 0.05
U2AF1-206ENST00000464750 CHCHD1Q96BP2 118 aaKnown RBP15.38■□□□□ 0.05
U2AF1-206ENST00000464750 IGKV2-28A0A075B6P5 120 aa15.37■□□□□ 0.05
U2AF1-206ENST00000464750 IGKV2D-28P01615 120 aa15.37■□□□□ 0.05
U2AF1-206ENST00000464750 VPREB1P12018 145 aa15.37■□□□□ 0.05
U2AF1-206ENST00000464750 COX17Q14061 63 aa15.37■□□□□ 0.05
U2AF1-206ENST00000464750 SFTA2Q6UW10 78 aa15.37■□□□□ 0.05
U2AF1-206ENST00000464750 UBE2AP49459 152 aa15.36■□□□□ 0.05
U2AF1-206ENST00000464750 IFI27L1Q96BM0 104 aa15.35■□□□□ 0.05
U2AF1-206ENST00000464750 KRTAP13-1Q8IUC0 172 aa15.34■□□□□ 0.05
U2AF1-206ENST00000464750 TRAV12-1A0A0B4J245 112 aa15.33■□□□□ 0.04
U2AF1-206ENST00000464750 CBLN2Q8IUK8 224 aa15.33■□□□□ 0.04
U2AF1-206ENST00000464750 A0A087X002 238 aa15.32■□□□□ 0.04
U2AF1-206ENST00000464750 RPL24P83731 157 aaKnown RBP15.32■□□□□ 0.04
U2AF1-206ENST00000464750 TMEM223A0PJW6 202 aa15.31■□□□□ 0.04
U2AF1-206ENST00000464750 Q8NDZ9 215 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms