RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 NREPQ16612 68 aa8.18□□□□□ -1.1
RBM39-223ENST00000463004 FAM19A3Q7Z5A8 133 aa8.18□□□□□ -1.1
RBM39-223ENST00000463004 LINC00643Q86TS7 51 aa8.18□□□□□ -1.1
RBM39-223ENST00000463004 PPDPFQ9H3Y8 114 aa8.18□□□□□ -1.1
RBM39-223ENST00000463004 USP17L23D6RBM5 183 aa8.17□□□□□ -1.1
RBM39-223ENST00000463004 ATP5EP2Q5VTU8 51 aa8.17□□□□□ -1.1
RBM39-223ENST00000463004 SMIM11BQ8TCY0 68 aa8.17□□□□□ -1.1
RBM39-223ENST00000463004 USP24Q9UPU5 2620 aa8.17□□□□□ -1.1
RBM39-223ENST00000463004 LAMA3Q16787 3333 aa8.17□□□□□ -1.1
RBM39-223ENST00000463004 WIPF1O43516 503 aa8.17□□□□□ -1.1
RBM39-223ENST00000463004 KRTAP10-3P60369 221 aa8.17□□□□□ -1.1
RBM39-223ENST00000463004 ZNF73O43830 326 aaPredicted RBP8.17□□□□□ -1.1
RBM39-223ENST00000463004 NDUFB1O75438 58 aa8.17□□□□□ -1.1
RBM39-223ENST00000463004 FAM19A1Q7Z5A9 133 aa8.16□□□□□ -1.1
RBM39-223ENST00000463004 SMIM20Q8N5G0 67 aa8.15□□□□□ -1.1
RBM39-223ENST00000463004 HECTD1Q9ULT8 2610 aa8.15□□□□□ -1.1
RBM39-223ENST00000463004 FAM19A5Q7Z5A7 132 aaPredicted RBP8.15□□□□□ -1.1
RBM39-223ENST00000463004 SPATA3Q8NHX4 192 aa8.15□□□□□ -1.1
RBM39-223ENST00000463004 HELZ2Q9BYK8 2649 aaKnown RBP8.15□□□□□ -1.1
RBM39-223ENST00000463004 ESRGQ1W209 222 aa8.15□□□□□ -1.11
RBM39-223ENST00000463004 GIG44P09565 113 aaPredicted RBP8.14□□□□□ -1.11
RBM39-223ENST00000463004 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.14□□□□□ -1.11
RBM39-223ENST00000463004 LY6G6CO95867 125 aa8.14□□□□□ -1.11
RBM39-223ENST00000463004 M0QXV9 152 aa8.14□□□□□ -1.11
RBM39-223ENST00000463004 HIGD2AQ9BW72 106 aa8.13□□□□□ -1.11
RBM39-223ENST00000463004 ADAMTSL4-AS1Q5T5F5 129 aa8.13□□□□□ -1.11
RBM39-223ENST00000463004 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
RBM39-223ENST00000463004 LINC00526Q96FQ7 95 aa8.12□□□□□ -1.11
RBM39-223ENST00000463004 FLNBO75369 2602 aaKnown RBP8.12□□□□□ -1.11
RBM39-223ENST00000463004 PRYO14603 147 aa8.12□□□□□ -1.11
RBM39-223ENST00000463004 CR1P17927 2039 aa8.11□□□□□ -1.11
RBM39-223ENST00000463004 ATOX1O00244 68 aa8.11□□□□□ -1.11
RBM39-223ENST00000463004 PLAC8L1A1L4L8 177 aa8.11□□□□□ -1.11
RBM39-223ENST00000463004 DNAH10OSP0CZ25 163 aa8.1□□□□□ -1.11
RBM39-223ENST00000463004 C1orf134Q5TEV5 83 aa8.1□□□□□ -1.11
RBM39-223ENST00000463004 Q6ZQY7 126 aa8.1□□□□□ -1.11
RBM39-223ENST00000463004 C14orf132Q9NPU4 83 aa8.1□□□□□ -1.11
RBM39-223ENST00000463004 FLNAP21333 2647 aaKnown RBP8.09□□□□□ -1.11
RBM39-223ENST00000463004 GVQW2A0A096LPI5 108 aaPredicted RBP8.09□□□□□ -1.11
RBM39-223ENST00000463004 BRCA2P51587 3418 aa8.09□□□□□ -1.11
RBM39-223ENST00000463004 FAM240AA0A1B0GVK7 77 aa8.08□□□□□ -1.12
RBM39-223ENST00000463004 M0R2N4 97 aa8.08□□□□□ -1.12
RBM39-223ENST00000463004 KRTAP10-11P60412 298 aa8.07□□□□□ -1.12
RBM39-223ENST00000463004 TRBV10-3A0A0K0K1G6 114 aa8.07□□□□□ -1.12
RBM39-223ENST00000463004 TM2D3Q9BRN9 247 aa8.07□□□□□ -1.12
RBM39-223ENST00000463004 C9orf153Q5TBE3 101 aa8.07□□□□□ -1.12
RBM39-223ENST00000463004 K7EIL1 84 aa8.07□□□□□ -1.12
RBM39-223ENST00000463004 Q6ZRU5 148 aa8.07□□□□□ -1.12
RBM39-223ENST00000463004 Q8N814 137 aa8.07□□□□□ -1.12
RBM39-223ENST00000463004 SS18L2Q9UHA2 77 aa8.07□□□□□ -1.12
RBM39-223ENST00000463004 ITPR3Q14573 2671 aa8.06□□□□□ -1.12
RBM39-223ENST00000463004 TRBV7-6A0A0J9YX20 115 aa8.06□□□□□ -1.12
RBM39-223ENST00000463004 TEX49A0A1B0GTD5 131 aa8.06□□□□□ -1.12
RBM39-223ENST00000463004 C6orf223Q8N319 242 aa8.06□□□□□ -1.12
RBM39-223ENST00000463004 IMUPQ9GZP8 106 aa8.06□□□□□ -1.12
RBM39-223ENST00000463004 Q9UF83 564 aa8.06□□□□□ -1.12
RBM39-223ENST00000463004 IGKV2-28A0A075B6P5 120 aa8.06□□□□□ -1.12
RBM39-223ENST00000463004 IGKV2D-28P01615 120 aa8.06□□□□□ -1.12
RBM39-223ENST00000463004 C9orf116Q5BN46 136 aaPredicted RBP8.05□□□□□ -1.12
RBM39-223ENST00000463004 REG3GQ6UW15 175 aa8.05□□□□□ -1.12
RBM39-223ENST00000463004 BPY2O14599 106 aa8.05□□□□□ -1.12
RBM39-223ENST00000463004 MDFIQ99750 246 aa8.05□□□□□ -1.12
RBM39-223ENST00000463004 AKAP13Q12802 2813 aa8.04□□□□□ -1.12
RBM39-223ENST00000463004 MRPL55Q7Z7F7 128 aaKnown RBP8.04□□□□□ -1.12
RBM39-223ENST00000463004 IGLV5-52A0A0A0MRZ9 124 aa8.03□□□□□ -1.12
RBM39-223ENST00000463004 PRR34Q9NV39 138 aa8.03□□□□□ -1.12
RBM39-223ENST00000463004 SLPIP03973 132 aa8.03□□□□□ -1.12
RBM39-223ENST00000463004 NDUFV3P56181 108 aaKnown RBP8.03□□□□□ -1.12
RBM39-223ENST00000463004 LINC00588Q9Y4M8 146 aa8.03□□□□□ -1.12
RBM39-223ENST00000463004 TNRC18O15417 2968 aaPredicted RBP8.03□□□□□ -1.12
RBM39-223ENST00000463004 ENHOQ6UWT2 76 aa8.02□□□□□ -1.13
RBM39-223ENST00000463004 CFAP46Q8IYW2 2715 aa8.02□□□□□ -1.13
RBM39-223ENST00000463004 IGKV3D-7A0A0C4DH55 119 aa8.01□□□□□ -1.13
RBM39-223ENST00000463004 Q6JHZ5 121 aa8.01□□□□□ -1.13
RBM39-223ENST00000463004 NBDYA0A0U1RRE5 68 aa8.01□□□□□ -1.13
RBM39-223ENST00000463004 CCKP06307 115 aa8.01□□□□□ -1.13
RBM39-223ENST00000463004 LINC00575Q6W349 94 aa8.01□□□□□ -1.13
RBM39-223ENST00000463004 WWC2-AS2Q96NR7 200 aa8.01□□□□□ -1.13
RBM39-223ENST00000463004 LINC00337Q8N6G1 96 aa8□□□□□ -1.13
RBM39-223ENST00000463004 C6orf48Q9UBA6 75 aa8□□□□□ -1.13
RBM39-223ENST00000463004 IGSF10Q6WRI0 2623 aa8□□□□□ -1.13
RBM39-223ENST00000463004 MP68P56378 58 aa8□□□□□ -1.13
RBM39-223ENST00000463004 RPL37AP8A6NKH3 93 aa8□□□□□ -1.13
RBM39-223ENST00000463004 MGAQ8IWI9 3026 aa7.99□□□□□ -1.13
RBM39-223ENST00000463004 UPK3BQ9BT76 320 aa7.99□□□□□ -1.13
RBM39-223ENST00000463004 ZNF575Q86XF7 245 aa7.98□□□□□ -1.13
RBM39-223ENST00000463004 FAM236AA0A1B0GUQ0 79 aa7.98□□□□□ -1.13
RBM39-223ENST00000463004 FAM236BA0A1B0GV22 79 aa7.98□□□□□ -1.13
RBM39-223ENST00000463004 PRUNE2Q8WUY3 3088 aa7.97□□□□□ -1.13
RBM39-223ENST00000463004 A0A1B0GW54 56 aa7.96□□□□□ -1.13
RBM39-223ENST00000463004 C22orf24Q9Y442 160 aa7.96□□□□□ -1.14
RBM39-223ENST00000463004 LITAFQ99732 161 aa7.95□□□□□ -1.14
RBM39-223ENST00000463004 PRR3P79522 188 aaKnown RBP7.95□□□□□ -1.14
RBM39-223ENST00000463004 C10orf25Q5T742 122 aa7.95□□□□□ -1.14
RBM39-223ENST00000463004 Q6Q795 121 aa7.95□□□□□ -1.14
RBM39-223ENST00000463004 A0A087WYN8 130 aa7.94□□□□□ -1.14
RBM39-223ENST00000463004 C16orf90A8MZG2 172 aa7.93□□□□□ -1.14
RBM39-223ENST00000463004 C3orf84H3BNL1 204 aa7.93□□□□□ -1.14
RBM39-223ENST00000463004 SOSTDC1Q6X4U4 206 aa7.93□□□□□ -1.14
RBM39-223ENST00000463004 TRIOO75962 3097 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms