RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 GAGE12JA6NER3 117 aa12.48□□□□□ -0.41
ATPAF2-202ENST00000462733 SMIM1B2RUZ4 78 aa12.48□□□□□ -0.41
ATPAF2-202ENST00000462733 GAGE4Q13068 117 aa12.48□□□□□ -0.41
ATPAF2-202ENST00000462733 GAGE5Q13069 117 aa12.48□□□□□ -0.41
ATPAF2-202ENST00000462733 MUC7Q8TAX7 377 aa12.48□□□□□ -0.41
ATPAF2-202ENST00000462733 C9JAW5 83 aa12.47□□□□□ -0.41
ATPAF2-202ENST00000462733 H7C2G1 150 aa12.47□□□□□ -0.41
ATPAF2-202ENST00000462733 UBE2L6O14933 153 aa12.47□□□□□ -0.41
ATPAF2-202ENST00000462733 TRIAP1O43715 76 aa12.47□□□□□ -0.41
ATPAF2-202ENST00000462733 COX6CP09669 75 aa12.47□□□□□ -0.41
ATPAF2-202ENST00000462733 HERV-K104P63124 156 aa12.47□□□□□ -0.41
ATPAF2-202ENST00000462733 COX6A2Q02221 97 aa12.47□□□□□ -0.41
ATPAF2-202ENST00000462733 ICOSQ9Y6W8 199 aa12.47□□□□□ -0.41
ATPAF2-202ENST00000462733 NUPR2A6NF83 97 aa12.46□□□□□ -0.41
ATPAF2-202ENST00000462733 LINC01620Q4KN68 170 aa12.46□□□□□ -0.41
ATPAF2-202ENST00000462733 ANKRD29Q8N6D5 301 aa12.46□□□□□ -0.41
ATPAF2-202ENST00000462733 CARD19Q96LW7 228 aa12.46□□□□□ -0.41
ATPAF2-202ENST00000462733 STARD9Q9P2P6 4700 aa12.46□□□□□ -0.41
ATPAF2-202ENST00000462733 A0A096LPF7 62 aa12.45□□□□□ -0.42
ATPAF2-202ENST00000462733 Q9H8V8 135 aa12.45□□□□□ -0.42
ATPAF2-202ENST00000462733 KLK5Q9Y337 293 aaPredicted RBP12.44□□□□□ -0.42
ATPAF2-202ENST00000462733 A0A1B0GV72 72 aa12.43□□□□□ -0.42
ATPAF2-202ENST00000462733 H3BNG1 76 aa12.43□□□□□ -0.42
ATPAF2-202ENST00000462733 ZNF625Q96I27 306 aaPredicted RBP12.43□□□□□ -0.42
ATPAF2-202ENST00000462733 PLECQ15149 4684 aaKnown RBP12.43□□□□□ -0.42
ATPAF2-202ENST00000462733 TRAV13-1A0A0B4J241 112 aa12.42□□□□□ -0.42
ATPAF2-202ENST00000462733 TRBV10-2A0A0K0K1G8 114 aa12.42□□□□□ -0.42
ATPAF2-202ENST00000462733 MRPL23Q16540 153 aaKnown RBP12.42□□□□□ -0.42
ATPAF2-202ENST00000462733 TMEM262E9PQX1 116 aa12.42□□□□□ -0.42
ATPAF2-202ENST00000462733 LINC00308Q8TCZ7 52 aa12.42□□□□□ -0.42
ATPAF2-202ENST00000462733 CDIP1Q9H305 208 aa12.42□□□□□ -0.42
ATPAF2-202ENST00000462733 RPL13AP40429 203 aaKnown RBP12.41□□□□□ -0.42
ATPAF2-202ENST00000462733 C15orf53Q8NAA6 179 aa12.41□□□□□ -0.42
ATPAF2-202ENST00000462733 H3BT86 120 aa12.4□□□□□ -0.42
ATPAF2-202ENST00000462733 APLNQ9ULZ1 77 aa12.38□□□□□ -0.43
ATPAF2-202ENST00000462733 TENM2Q9NT68 2774 aa12.38□□□□□ -0.43
ATPAF2-202ENST00000462733 TRBV6-8A0A0A6YYG3 113 aa12.37□□□□□ -0.43
ATPAF2-202ENST00000462733 LST1O00453 97 aa12.37□□□□□ -0.43
ATPAF2-202ENST00000462733 NPC2P61916 151 aa12.37□□□□□ -0.43
ATPAF2-202ENST00000462733 C3orf84H3BNL1 204 aa12.36□□□□□ -0.43
ATPAF2-202ENST00000462733 MEIG1Q5JSS6 88 aa12.36□□□□□ -0.43
ATPAF2-202ENST00000462733 CASC10Q5T4H9 136 aa12.36□□□□□ -0.43
ATPAF2-202ENST00000462733 DAND5Q8N907 189 aa12.35□□□□□ -0.43
ATPAF2-202ENST00000462733 NTN5Q8WTR8 489 aaPredicted RBP12.34□□□□□ -0.43
ATPAF2-202ENST00000462733 ESRGQ1W209 222 aa12.34□□□□□ -0.43
ATPAF2-202ENST00000462733 LYPD5Q6UWN5 251 aa12.34□□□□□ -0.43
ATPAF2-202ENST00000462733 C2orf82Q6UX34 121 aa12.34□□□□□ -0.43
ATPAF2-202ENST00000462733 COX7B2Q8TF08 81 aa12.34□□□□□ -0.43
ATPAF2-202ENST00000462733 UBE2WQ96B02 151 aa12.33□□□□□ -0.44
ATPAF2-202ENST00000462733 GAGE6Q13070 117 aa12.32□□□□□ -0.44
ATPAF2-202ENST00000462733 SOSTDC1Q6X4U4 206 aa12.32□□□□□ -0.44
ATPAF2-202ENST00000462733 LYSTQ99698 3801 aa12.32□□□□□ -0.44
ATPAF2-202ENST00000462733 COX7A2LO14548 114 aa12.31□□□□□ -0.44
ATPAF2-202ENST00000462733 CHCHD5Q9BSY4 110 aa12.31□□□□□ -0.44
ATPAF2-202ENST00000462733 XGP55808 180 aa12.3□□□□□ -0.44
ATPAF2-202ENST00000462733 CLEC2BQ92478 149 aa12.3□□□□□ -0.44
ATPAF2-202ENST00000462733 A0A087WZ39 114 aa12.29□□□□□ -0.44
ATPAF2-202ENST00000462733 IGHV3OR16-9A0A0B4J2B5 98 aa12.29□□□□□ -0.44
ATPAF2-202ENST00000462733 CCL18P55774 89 aa12.29□□□□□ -0.44
ATPAF2-202ENST00000462733 LINC00588Q9Y4M8 146 aa12.29□□□□□ -0.44
ATPAF2-202ENST00000462733 IGLV4-60A0A075B6I1 120 aa12.28□□□□□ -0.44
ATPAF2-202ENST00000462733 TRAV13-2A0A0B4J235 113 aa12.28□□□□□ -0.44
ATPAF2-202ENST00000462733 LELP1Q5T871 98 aa12.28□□□□□ -0.44
ATPAF2-202ENST00000462733 A0A1B0GUV1 79 aa12.27□□□□□ -0.45
ATPAF2-202ENST00000462733 MT-ATP8P03928 68 aa12.27□□□□□ -0.45
ATPAF2-202ENST00000462733 UBE2DNLQ8IWF7 75 aa12.27□□□□□ -0.45
ATPAF2-202ENST00000462733 IBA57-AS1B1ANH7 110 aa12.26□□□□□ -0.45
ATPAF2-202ENST00000462733 LINC01561Q8N1V8 128 aa12.26□□□□□ -0.45
ATPAF2-202ENST00000462733 TRAV8-4A0A0B4J246 113 aa12.25□□□□□ -0.45
ATPAF2-202ENST00000462733 A0A0U1RRA0 63 aa12.25□□□□□ -0.45
ATPAF2-202ENST00000462733 FAM240AA0A1B0GVK7 77 aa12.25□□□□□ -0.45
ATPAF2-202ENST00000462733 TRACP01848 142 aa12.25□□□□□ -0.45
ATPAF2-202ENST00000462733 TEX49A0A1B0GTD5 131 aa12.25□□□□□ -0.45
ATPAF2-202ENST00000462733 CKS1BP61024 79 aa12.25□□□□□ -0.45
ATPAF2-202ENST00000462733 VPS13DQ5THJ4 4388 aa12.24□□□□□ -0.45
ATPAF2-202ENST00000462733 LINC00959A0A1B0GUT2 108 aa12.24□□□□□ -0.45
ATPAF2-202ENST00000462733 CRPP02741 224 aa12.23□□□□□ -0.45
ATPAF2-202ENST00000462733 WFDC10BQ8IUB3 73 aa12.23□□□□□ -0.45
ATPAF2-202ENST00000462733 MIR7-3HGQ8N6C7 128 aa12.23□□□□□ -0.45
ATPAF2-202ENST00000462733 RPL28P46779 137 aaKnown RBP12.22□□□□□ -0.45
ATPAF2-202ENST00000462733 SS18Q15532 418 aa12.22□□□□□ -0.45
ATPAF2-202ENST00000462733 SND1-IT1Q9HBX3 110 aa12.21□□□□□ -0.45
ATPAF2-202ENST00000462733 TOMM7Q9P0U1 55 aa12.21□□□□□ -0.45
ATPAF2-202ENST00000462733 DNAH1Q9P2D7 4330 aa12.2□□□□□ -0.46
ATPAF2-202ENST00000462733 IGKV3OR2-268A0A0C4DH90 116 aa12.2□□□□□ -0.46
ATPAF2-202ENST00000462733 Q8N3U1 123 aa12.2□□□□□ -0.46
ATPAF2-202ENST00000462733 UPK3BQ9BT76 320 aa12.2□□□□□ -0.46
ATPAF2-202ENST00000462733 LINC00158P58513 81 aa12.19□□□□□ -0.46
ATPAF2-202ENST00000462733 ALMS1Q8TCU4 4167 aa12.19□□□□□ -0.46
ATPAF2-202ENST00000462733 LY6G6CO95867 125 aa12.18□□□□□ -0.46
ATPAF2-202ENST00000462733 Q8IZM0 81 aa12.18□□□□□ -0.46
ATPAF2-202ENST00000462733 SNCGO76070 127 aa12.17□□□□□ -0.46
ATPAF2-202ENST00000462733 Q6Q795 121 aa12.17□□□□□ -0.46
ATPAF2-202ENST00000462733 C5orf38Q86SI9 138 aa12.17□□□□□ -0.46
ATPAF2-202ENST00000462733 LINC00476Q8WZB0 136 aa12.17□□□□□ -0.46
ATPAF2-202ENST00000462733 ACYP1P07311 99 aa12.16□□□□□ -0.46
ATPAF2-202ENST00000462733 IGKV2-28A0A075B6P5 120 aa12.15□□□□□ -0.46
ATPAF2-202ENST00000462733 IGKV2D-28P01615 120 aa12.15□□□□□ -0.46
ATPAF2-202ENST00000462733 LINC00337Q8N6G1 96 aa12.15□□□□□ -0.46
ATPAF2-202ENST00000462733 H0YGX0 51 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms