RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, human

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPA-210	ENST00000462553	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.94	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	APOM	O95445	188 aa		4.94	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	C10orf25	Q5T742	122 aa		4.94	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	CBLN2	Q8IUK8	224 aa		4.94	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	C2orf88	Q9BSF0	95 aa		4.94	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	TRAPPC1	Q9Y5R8	145 aa		4.94	□□□□□ -1.62
CDC42BPA-210	ENST00000462553		A0A0J9YXV3	536 aa		4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	TMEM238L	A0A1B0GVL6	79 aa		4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	MAJIN	Q3KP22	176 aa		4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	KRTAP5-3	Q6L8H2	238 aa		4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553		Q6ZN92	141 aa		4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	FA2H	Q7L5A8	372 aa		4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	ERAS	Q7Z444	233 aa		4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	LINC01561	Q8N1V8	128 aa		4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	CAMK2N2	Q96S95	79 aa		4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	KRTAP9-3	Q9BYQ3	159 aa		4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	VCX2	Q9H322	139 aa		4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	MRPL35	Q9NZE8	188 aa	Known RBP	4.93	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	LOC107984640	A0A0U1RRK4	108 aa		4.92	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	G0S2	P27469	103 aa		4.92	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	PTTG1IP	P53801	180 aa		4.92	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	KRTAP10-8	P60410	259 aa		4.92	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	RNF151	Q2KHN1	245 aa		4.92	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.92	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	STPG4	Q8N801	248 aa		4.92	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	C7orf33	Q8WU49	177 aa		4.92	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	SCGB3A1	Q96QR1	104 aa		4.92	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	C6orf48	Q9UBA6	75 aa		4.92	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	MUC2	Q02817	5179 aa		4.92	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	IGLV5-45	A0A087WSX0	123 aa		4.91	□□□□□ -1.62
CDC42BPA-210	ENST00000462553		F8WDY8	70 aa		4.91	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	PAPPA-AS1	Q5QFB9	102 aa		4.91	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	SMCO4	Q9NRQ5	59 aa		4.91	□□□□□ -1.62
CDC42BPA-210	ENST00000462553	CDKN2A-AS1	Q9UH64	79 aa		4.91	□□□□□ -1.62
CDC42BPA-210	ENST00000462553		A0A1W2PNN7	141 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	LINC01549	A6NIU2	74 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	NDUFA1	O15239	70 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	LINC00614	P0C842	121 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	TLX1NB	P0CAT3	122 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	HERVK_113	P63121	156 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	GAGE2B	Q13066	116 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	PMCHL1	Q16048	86 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	PDZD11	Q5EBL8	140 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	C2orf82	Q6UX34	121 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	DPH3	Q96FX2	82 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	PKIG	Q9Y2B9	76 aa		4.9	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	TINCR	A0A1B0GVN0	87 aa		4.89	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	SMIM1	B2RUZ4	78 aa		4.89	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	HBD	P02042	147 aa		4.89	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	RPL18A	Q02543	176 aa	Known RBP	4.89	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	PMVK	Q15126	192 aa		4.89	□□□□□ -1.63
CDC42BPA-210	ENST00000462553		Q6ZRP5	223 aa		4.89	□□□□□ -1.63
CDC42BPA-210	ENST00000462553		Q8IZM0	81 aa		4.89	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	CST9L	Q9H4G1	147 aa		4.89	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	LINC00474	Q9P2X8	69 aa		4.89	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	TRBV30	A0A0K0K1B3	111 aa		4.88	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	IGLC3	P0DOY3	106 aa		4.88	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	LINC00310	P59036	64 aa		4.88	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	SEC11A	P67812	179 aa		4.88	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	C9orf116	Q5BN46	136 aa	Predicted RBP	4.88	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	SPINK6	Q6UWN8	80 aa		4.88	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	KRTAP7-1	Q8IUC3	87 aa		4.88	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	LINC00469	Q8N7U9	141 aa		4.88	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	GEMIN7	Q9H840	131 aa	Known RBP	4.88	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	FAM168B	A1KXE4	195 aa		4.87	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	COLCA2	A8K830	154 aa		4.87	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	RAB5B	P61020	215 aa		4.87	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	TOMM7	Q9P0U1	55 aa		4.87	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	NDUFC2-KCTD14	E9PQ53	114 aa		4.86	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	TRGC2	P03986	189 aa		4.86	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	SPINK8	P0C7L1	97 aa		4.86	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	ZNF22	P17026	224 aa	Predicted RBP	4.86	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	C9orf129	Q5T035	196 aa	Known RBP	4.86	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	REG3G	Q6UW15	175 aa		4.86	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	CHCHD1	Q96BP2	118 aa	Known RBP	4.86	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	PACRG	Q96M98	296 aa	Predicted RBP	4.86	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	IGLV5-39	A0A0G2JS06	123 aa		4.85	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	C11orf86	A6NJI1	115 aa		4.85	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	SCO1	O75880	301 aa		4.85	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	ATP5L	O75964	103 aa		4.85	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	PRSS2	P07478	247 aa		4.85	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	GAGE2E	Q4V326	116 aa		4.85	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	PHF5A	Q7RTV0	110 aa	Known RBP	4.85	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	KRTAP11-1	Q8IUC1	163 aa		4.85	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	COX7B2	Q8TF08	81 aa		4.85	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	GAGE2D	Q9UEU5	116 aa		4.85	□□□□□ -1.63
CDC42BPA-210	ENST00000462553		F8VRH5	84 aa		4.84	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	CXCL5	P42830	114 aa		4.84	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	C6orf226	Q5I0X4	101 aa		4.84	□□□□□ -1.63
CDC42BPA-210	ENST00000462553	TRAV12-1	A0A0B4J245	112 aa		4.83	□□□□□ -1.64
CDC42BPA-210	ENST00000462553	NUPR1	O60356	82 aa		4.83	□□□□□ -1.64
CDC42BPA-210	ENST00000462553	SERF1A	O75920	110 aa		4.83	□□□□□ -1.64
CDC42BPA-210	ENST00000462553	NDUFA6	P56556	154 aa		4.83	□□□□□ -1.64
CDC42BPA-210	ENST00000462553	CKS1B	P61024	79 aa		4.83	□□□□□ -1.64
CDC42BPA-210	ENST00000462553	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.83	□□□□□ -1.64
CDC42BPA-210	ENST00000462553	FAM19A2	Q8N3H0	131 aa		4.83	□□□□□ -1.64
CDC42BPA-210	ENST00000462553	IFI27L1	Q96BM0	104 aa		4.83	□□□□□ -1.64
CDC42BPA-210	ENST00000462553	PSORS1C2	Q9UIG4	136 aa		4.83	□□□□□ -1.64
CDC42BPA-210	ENST00000462553	FAT4	Q6V0I7	4981 aa		4.82	□□□□□ -1.64

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