RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 GAGE2DQ9UEU5 116 aa6.29□□□□□ -1.4
SF3A3-204ENST00000462258 ERASQ7Z444 233 aa6.28□□□□□ -1.4
SF3A3-204ENST00000462258 Q8IZM0 81 aa6.28□□□□□ -1.4
SF3A3-204ENST00000462258 SCGB3A1Q96QR1 104 aa6.28□□□□□ -1.4
SF3A3-204ENST00000462258 GEMIN7Q9H840 131 aaKnown RBP6.28□□□□□ -1.4
SF3A3-204ENST00000462258 CDKN2A-AS1Q9UH64 79 aa6.28□□□□□ -1.4
SF3A3-204ENST00000462258 PSORS1C2Q9UIG4 136 aa6.28□□□□□ -1.4
SF3A3-204ENST00000462258 PLA2G2DQ9UNK4 145 aa6.28□□□□□ -1.4
SF3A3-204ENST00000462258 LINC01546A6NGU7 62 aa6.27□□□□□ -1.41
SF3A3-204ENST00000462258 LINC01549A6NIU2 74 aa6.27□□□□□ -1.41
SF3A3-204ENST00000462258 NDUFC2-KCTD14E9PQ53 114 aa6.27□□□□□ -1.41
SF3A3-204ENST00000462258 CKS1BP61024 79 aa6.27□□□□□ -1.41
SF3A3-204ENST00000462258 FABP9Q0Z7S8 132 aa6.27□□□□□ -1.41
SF3A3-204ENST00000462258 REG3GQ6UW15 175 aa6.27□□□□□ -1.41
SF3A3-204ENST00000462258 FA2HQ7L5A8 372 aa6.27□□□□□ -1.41
SF3A3-204ENST00000462258 LINC01600Q96MT4 127 aa6.27□□□□□ -1.41
SF3A3-204ENST00000462258 SMCO4Q9NRQ5 59 aa6.27□□□□□ -1.41
SF3A3-204ENST00000462258 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
SF3A3-204ENST00000462258 M0QXV9 152 aa6.26□□□□□ -1.41
SF3A3-204ENST00000462258 SRSF9Q13242 221 aaKnown RBP eCLIP6.26□□□□□ -1.41
SF3A3-204ENST00000462258 C1orf137Q5JT78 98 aa6.26□□□□□ -1.41
SF3A3-204ENST00000462258 LINC00469Q8N7U9 141 aa6.26□□□□□ -1.41
SF3A3-204ENST00000462258 C6orf226Q5I0X4 101 aa6.25□□□□□ -1.41
SF3A3-204ENST00000462258 C9orf129Q5T035 196 aaKnown RBP6.25□□□□□ -1.41
SF3A3-204ENST00000462258 IGLV5-45A0A087WSX0 123 aa6.24□□□□□ -1.41
SF3A3-204ENST00000462258 TINCRA0A1B0GVN0 87 aa6.24□□□□□ -1.41
SF3A3-204ENST00000462258 SMIM1B2RUZ4 78 aa6.24□□□□□ -1.41
SF3A3-204ENST00000462258 F8VRH5 84 aa6.24□□□□□ -1.41
SF3A3-204ENST00000462258 APOC3P02656 99 aa6.24□□□□□ -1.41
SF3A3-204ENST00000462258 CXCL5P42830 114 aa6.24□□□□□ -1.41
SF3A3-204ENST00000462258 NDUFA5Q16718 116 aa6.24□□□□□ -1.41
SF3A3-204ENST00000462258 KRTAP7-1Q8IUC3 87 aa6.24□□□□□ -1.41
SF3A3-204ENST00000462258 UBE2BP63146 152 aa6.23□□□□□ -1.41
SF3A3-204ENST00000462258 PMVKQ15126 192 aa6.23□□□□□ -1.41
SF3A3-204ENST00000462258 KRTAP11-1Q8IUC1 163 aa6.23□□□□□ -1.41
SF3A3-204ENST00000462258 SVBPQ8N300 66 aa6.23□□□□□ -1.41
SF3A3-204ENST00000462258 C18orf32Q8TCD1 76 aa6.23□□□□□ -1.41
SF3A3-204ENST00000462258 CST9LQ9H4G1 147 aa6.23□□□□□ -1.41
SF3A3-204ENST00000462258 TRAPPC1Q9Y5R8 145 aa6.23□□□□□ -1.41
SF3A3-204ENST00000462258 SNAPINO95295 136 aa6.22□□□□□ -1.41
SF3A3-204ENST00000462258 IGLV7-43P04211 117 aa6.22□□□□□ -1.41
SF3A3-204ENST00000462258 SPINK8P0C7L1 97 aa6.22□□□□□ -1.41
SF3A3-204ENST00000462258 PDZD11Q5EBL8 140 aa6.22□□□□□ -1.41
SF3A3-204ENST00000462258 COX7B2Q8TF08 81 aa6.22□□□□□ -1.41
SF3A3-204ENST00000462258 A0A096LNJ9 63 aa6.21□□□□□ -1.42
SF3A3-204ENST00000462258 HBDP02042 147 aa6.21□□□□□ -1.42
SF3A3-204ENST00000462258 URB1-AS1Q96HZ7 61 aa6.21□□□□□ -1.42
SF3A3-204ENST00000462258 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.42
SF3A3-204ENST00000462258 H3BRM9 83 aa6.2□□□□□ -1.42
SF3A3-204ENST00000462258 IGLC3P0DOY3 106 aa6.2□□□□□ -1.42
SF3A3-204ENST00000462258 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
SF3A3-204ENST00000462258 ODF1Q14990 250 aa6.2□□□□□ -1.42
SF3A3-204ENST00000462258 DIRC1Q969H9 104 aa6.2□□□□□ -1.42
SF3A3-204ENST00000462258 LRP2P98164 4655 aa6.19□□□□□ -1.42
SF3A3-204ENST00000462258 H0Y9J4 135 aa6.19□□□□□ -1.42
SF3A3-204ENST00000462258 LINC00614P0C842 121 aa6.19□□□□□ -1.42
SF3A3-204ENST00000462258 NDUFA6P56556 154 aa6.19□□□□□ -1.42
SF3A3-204ENST00000462258 KRTAP10-8P60410 259 aa6.19□□□□□ -1.42
SF3A3-204ENST00000462258 PMCHL1Q16048 86 aa6.19□□□□□ -1.42
SF3A3-204ENST00000462258 RAB5BP61020 215 aa6.18□□□□□ -1.42
SF3A3-204ENST00000462258 C22orf24Q9Y442 160 aa6.18□□□□□ -1.42
SF3A3-204ENST00000462258 ATP5LO75964 103 aa6.17□□□□□ -1.42
SF3A3-204ENST00000462258 ZNF22P17026 224 aaPredicted RBP6.17□□□□□ -1.42
SF3A3-204ENST00000462258 YPEL4Q96NS1 127 aa6.17□□□□□ -1.42
SF3A3-204ENST00000462258 TP73-AS1Q9UF72 201 aa6.17□□□□□ -1.42
SF3A3-204ENST00000462258 IGLV5-39A0A0G2JS06 123 aa6.16□□□□□ -1.42
SF3A3-204ENST00000462258 NUPR1O60356 82 aa6.16□□□□□ -1.42
SF3A3-204ENST00000462258 LBHQ53QV2 105 aaPredicted RBP6.16□□□□□ -1.42
SF3A3-204ENST00000462258 MRPL55Q7Z7F7 128 aaKnown RBP6.16□□□□□ -1.42
SF3A3-204ENST00000462258 C11orf86A6NJI1 115 aa6.15□□□□□ -1.42
SF3A3-204ENST00000462258 BAGE3Q86Y29 109 aa6.14□□□□□ -1.43
SF3A3-204ENST00000462258 CBLN2Q8IUK8 224 aa6.14□□□□□ -1.43
SF3A3-204ENST00000462258 PRR26Q8N8Z3 221 aa6.14□□□□□ -1.43
SF3A3-204ENST00000462258 CHCHD1Q96BP2 118 aaKnown RBP6.14□□□□□ -1.43
SF3A3-204ENST00000462258 IGLV5-37A0A075B6J1 123 aa6.13□□□□□ -1.43
SF3A3-204ENST00000462258 ZNF861PO60384 105 aa6.13□□□□□ -1.43
SF3A3-204ENST00000462258 KRTAP1-4P0C5Y4 121 aa6.13□□□□□ -1.43
SF3A3-204ENST00000462258 PFN2P35080 140 aa6.13□□□□□ -1.43
SF3A3-204ENST00000462258 TMEM170BQ5T4T1 132 aa6.13□□□□□ -1.43
SF3A3-204ENST00000462258 NKAPP1Q8N9T2 125 aa6.13□□□□□ -1.43
SF3A3-204ENST00000462258 ERG28Q9UKR5 140 aa6.13□□□□□ -1.43
SF3A3-204ENST00000462258 IGLV1-50A0A075B6I6 118 aa6.12□□□□□ -1.43
SF3A3-204ENST00000462258 GAGE10A6NGK3 116 aa6.12□□□□□ -1.43
SF3A3-204ENST00000462258 LINC00167Q96N53 147 aa6.12□□□□□ -1.43
SF3A3-204ENST00000462258 CHTOPQ9Y3Y2 248 aaKnown RBP6.12□□□□□ -1.43
SF3A3-204ENST00000462258 TRAV12-1A0A0B4J245 112 aa6.11□□□□□ -1.43
SF3A3-204ENST00000462258 RPL37AP8A6NKH3 93 aa6.11□□□□□ -1.43
SF3A3-204ENST00000462258 BCE1O60756 84 aa6.11□□□□□ -1.43
SF3A3-204ENST00000462258 HSBP1O75506 76 aa6.11□□□□□ -1.43
SF3A3-204ENST00000462258 SFTA2Q6UW10 78 aa6.11□□□□□ -1.43
SF3A3-204ENST00000462258 IFI27L1Q96BM0 104 aa6.11□□□□□ -1.43
SF3A3-204ENST00000462258 RPL28P46779 137 aaKnown RBP6.1□□□□□ -1.43
SF3A3-204ENST00000462258 COX17Q14061 63 aa6.1□□□□□ -1.43
SF3A3-204ENST00000462258 ZNF625Q96I27 306 aaPredicted RBP6.1□□□□□ -1.43
SF3A3-204ENST00000462258 SND1-IT1Q9HBX3 110 aa6.1□□□□□ -1.43
SF3A3-204ENST00000462258 IGKV2-28A0A075B6P5 120 aa6.09□□□□□ -1.43
SF3A3-204ENST00000462258 TMEM223A0PJW6 202 aa6.09□□□□□ -1.43
SF3A3-204ENST00000462258 SCO1O75880 301 aa6.09□□□□□ -1.43
SF3A3-204ENST00000462258 IGKV2D-28P01615 120 aa6.09□□□□□ -1.43
SF3A3-204ENST00000462258 RPL13AP40429 203 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms