RNA–Protein interactions for RNA: ENST00000461426.1

SIGMAR1-204, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 939 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-204ENST00000461426 CKS1BP61024 79 aa16.79■□□□□ 0.28
SIGMAR1-204ENST00000461426 HSBP1O75506 76 aa16.78■□□□□ 0.28
SIGMAR1-204ENST00000461426 IGLC3P0DOY3 106 aa16.78■□□□□ 0.28
SIGMAR1-204ENST00000461426 RPL37AP61513 92 aaKnown RBP16.78■□□□□ 0.28
SIGMAR1-204ENST00000461426 C2orf82Q6UX34 121 aa16.78■□□□□ 0.28
SIGMAR1-204ENST00000461426 RPL18AQ02543 176 aaKnown RBP16.77■□□□□ 0.28
SIGMAR1-204ENST00000461426 SMIM1B2RUZ4 78 aa16.76■□□□□ 0.27
SIGMAR1-204ENST00000461426 H3BRM9 83 aa16.76■□□□□ 0.27
SIGMAR1-204ENST00000461426 KRTAP10-4P60372 401 aaPredicted RBP16.75■□□□□ 0.27
SIGMAR1-204ENST00000461426 C7orf33Q8WU49 177 aa16.75■□□□□ 0.27
SIGMAR1-204ENST00000461426 SCO1O75880 301 aa16.74■□□□□ 0.27
SIGMAR1-204ENST00000461426 IFI27L1Q96BM0 104 aa16.73■□□□□ 0.27
SIGMAR1-204ENST00000461426 CXCL5P42830 114 aa16.72■□□□□ 0.27
SIGMAR1-204ENST00000461426 FAM19A2Q8N3H0 131 aa16.72■□□□□ 0.27
SIGMAR1-204ENST00000461426 SPINK8P0C7L1 97 aa16.71■□□□□ 0.27
SIGMAR1-204ENST00000461426 Q6ZRP5 223 aa16.71■□□□□ 0.27
SIGMAR1-204ENST00000461426 SERF1AO75920 110 aa16.7■□□□□ 0.26
SIGMAR1-204ENST00000461426 COX7B2Q8TF08 81 aa16.7■□□□□ 0.26
SIGMAR1-204ENST00000461426 TRAV12-1A0A0B4J245 112 aa16.69■□□□□ 0.26
SIGMAR1-204ENST00000461426 NDUFC2-KCTD14E9PQ53 114 aa16.69■□□□□ 0.26
SIGMAR1-204ENST00000461426 F8VRH5 84 aa16.69■□□□□ 0.26
SIGMAR1-204ENST00000461426 A0A1W2PNN7 141 aa16.68■□□□□ 0.26
SIGMAR1-204ENST00000461426 ZNF22P17026 224 aaPredicted RBP16.68■□□□□ 0.26
SIGMAR1-204ENST00000461426 C9orf116Q5BN46 136 aaPredicted RBP16.68■□□□□ 0.26
SIGMAR1-204ENST00000461426 CHTOPQ9Y3Y2 248 aaKnown RBP16.68■□□□□ 0.26
SIGMAR1-204ENST00000461426 FLG2Q5D862 2391 aaPredicted RBP16.68■□□□□ 0.26
SIGMAR1-204ENST00000461426 LINC00310P59036 64 aa16.67■□□□□ 0.26
SIGMAR1-204ENST00000461426 GAGE2EQ4V326 116 aa16.67■□□□□ 0.26
SIGMAR1-204ENST00000461426 GAGE2DQ9UEU5 116 aa16.67■□□□□ 0.26
SIGMAR1-204ENST00000461426 C11orf86A6NJI1 115 aa16.65■□□□□ 0.26
SIGMAR1-204ENST00000461426 IGLV5-39A0A0G2JS06 123 aa16.64■□□□□ 0.25
SIGMAR1-204ENST00000461426 LEPROTL1O95214 131 aa16.64■□□□□ 0.25
SIGMAR1-204ENST00000461426 TMEM170BQ5T4T1 132 aa16.63■□□□□ 0.25
SIGMAR1-204ENST00000461426 NUPR1O60356 82 aa16.62■□□□□ 0.25
SIGMAR1-204ENST00000461426 HSPB8Q9UJY1 196 aa16.61■□□□□ 0.25
SIGMAR1-204ENST00000461426 HIST1H2BKO60814 126 aa16.58■□□□□ 0.24
SIGMAR1-204ENST00000461426 HIST1H2BJP06899 126 aa16.58■□□□□ 0.24
SIGMAR1-204ENST00000461426 HIST1H2BOP23527 126 aa16.58■□□□□ 0.24
SIGMAR1-204ENST00000461426 HIST1H2BBP33778 126 aa16.58■□□□□ 0.24
SIGMAR1-204ENST00000461426 HIST1H2BDP58876 126 aa16.58■□□□□ 0.24
SIGMAR1-204ENST00000461426 HIST1H2BCP62807 126 aa16.58■□□□□ 0.24
SIGMAR1-204ENST00000461426 HIST2H2BEQ16778 126 aa16.58■□□□□ 0.24
SIGMAR1-204ENST00000461426 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.58■□□□□ 0.24
SIGMAR1-204ENST00000461426 HIST1H2BHQ93079 126 aa16.58■□□□□ 0.24
SIGMAR1-204ENST00000461426 HIST1H2BNQ99877 126 aa16.58■□□□□ 0.24
SIGMAR1-204ENST00000461426 HIST1H2BMQ99879 126 aa16.58■□□□□ 0.24
SIGMAR1-204ENST00000461426 MYCBP2O75592 4640 aa16.57■□□□□ 0.24
SIGMAR1-204ENST00000461426 FAM168BA1KXE4 195 aa16.56■□□□□ 0.24
SIGMAR1-204ENST00000461426 C9orf129Q5T035 196 aaKnown RBP16.56■□□□□ 0.24
SIGMAR1-204ENST00000461426 FABP4P15090 132 aa16.55■□□□□ 0.24
SIGMAR1-204ENST00000461426 S100A1P23297 94 aa16.55■□□□□ 0.24
SIGMAR1-204ENST00000461426 PRR3P79522 188 aaKnown RBP16.55■□□□□ 0.24
SIGMAR1-204ENST00000461426 HNRNPA3P51991 378 aaKnown RBP16.54■□□□□ 0.24
SIGMAR1-204ENST00000461426 TMEM223A0PJW6 202 aa16.53■□□□□ 0.24
SIGMAR1-204ENST00000461426 ODF1Q14990 250 aa16.53■□□□□ 0.24
SIGMAR1-204ENST00000461426 SFTA2Q6UW10 78 aa16.53■□□□□ 0.24
SIGMAR1-204ENST00000461426 PHF5AQ7RTV0 110 aaKnown RBP16.53■□□□□ 0.24
SIGMAR1-204ENST00000461426 FAM19A5Q7Z5A7 132 aaPredicted RBP16.53■□□□□ 0.24
SIGMAR1-204ENST00000461426 H0Y8G0 127 aa16.52■□□□□ 0.24
SIGMAR1-204ENST00000461426 XAGE1AQ9HD64 81 aa16.51■□□□□ 0.23
SIGMAR1-204ENST00000461426 KRTAP7-1Q8IUC3 87 aa16.5■□□□□ 0.23
SIGMAR1-204ENST00000461426 DMBT1Q9UGM3 2413 aaPredicted RBP16.48■□□□□ 0.23
SIGMAR1-204ENST00000461426 KRTAP29-1A8MX34 341 aaPredicted RBP16.48■□□□□ 0.23
SIGMAR1-204ENST00000461426 MAP1LC3CQ9BXW4 147 aa16.48■□□□□ 0.23
SIGMAR1-204ENST00000461426 PKHD1L1Q86WI1 4243 aa16.48■□□□□ 0.23
SIGMAR1-204ENST00000461426 M0QXV9 152 aa16.46■□□□□ 0.23
SIGMAR1-204ENST00000461426 OXTP01178 125 aa16.46■□□□□ 0.23
SIGMAR1-204ENST00000461426 PLNP26678 52 aa16.46■□□□□ 0.23
SIGMAR1-204ENST00000461426 COX17Q14061 63 aa16.45■□□□□ 0.22
SIGMAR1-204ENST00000461426 ZNF625Q96I27 306 aaPredicted RBP16.45■□□□□ 0.22
SIGMAR1-204ENST00000461426 PSORS1C2Q9UIG4 136 aa16.45■□□□□ 0.22
SIGMAR1-204ENST00000461426 ERG28Q9UKR5 140 aa16.44■□□□□ 0.22
SIGMAR1-204ENST00000461426 J3QL48 77 aa16.43■□□□□ 0.22
SIGMAR1-204ENST00000461426 ATP6V1G1O75348 118 aa16.43■□□□□ 0.22
SIGMAR1-204ENST00000461426 DPM2O94777 84 aa16.43■□□□□ 0.22
SIGMAR1-204ENST00000461426 PFN2P35080 140 aa16.43■□□□□ 0.22
SIGMAR1-204ENST00000461426 COA6Q5JTJ3 125 aaKnown RBP16.43■□□□□ 0.22
SIGMAR1-204ENST00000461426 SERTAD4-AS1Q5TG53 156 aa16.43■□□□□ 0.22
SIGMAR1-204ENST00000461426 PLA2G2DQ9UNK4 145 aa16.42■□□□□ 0.22
SIGMAR1-204ENST00000461426 C22orf24Q9Y442 160 aa16.42■□□□□ 0.22
SIGMAR1-204ENST00000461426 LBHQ53QV2 105 aaPredicted RBP16.41■□□□□ 0.22
SIGMAR1-204ENST00000461426 SPINK6Q6UWN8 80 aa16.4■□□□□ 0.22
SIGMAR1-204ENST00000461426 TP73-AS1Q9UF72 201 aa16.4■□□□□ 0.22
SIGMAR1-204ENST00000461426 IGKCP01834 107 aa16.39■□□□□ 0.21
SIGMAR1-204ENST00000461426 UBE2BP63146 152 aa16.39■□□□□ 0.21
SIGMAR1-204ENST00000461426 SRSF9Q13242 221 aaKnown RBP eCLIP16.39■□□□□ 0.21
SIGMAR1-204ENST00000461426 C1orf137Q5JT78 98 aa16.39■□□□□ 0.21
SIGMAR1-204ENST00000461426 LRP1Q07954 4544 aaKnown RBP16.37■□□□□ 0.21
SIGMAR1-204ENST00000461426 SYS1-DBNDD2H3BUS1 97 aa16.37■□□□□ 0.21
SIGMAR1-204ENST00000461426 PMCHL2Q9BQD1 86 aa16.37■□□□□ 0.21
SIGMAR1-204ENST00000461426 HERVK_113P61574 105 aa16.36■□□□□ 0.21
SIGMAR1-204ENST00000461426 KRTAP11-1Q8IUC1 163 aa16.36■□□□□ 0.21
SIGMAR1-204ENST00000461426 LEPROTO15243 131 aa16.35■□□□□ 0.21
SIGMAR1-204ENST00000461426 HERV-K104P63124 156 aa16.35■□□□□ 0.21
SIGMAR1-204ENST00000461426 PLEKHB2Q96CS7 222 aa16.35■□□□□ 0.21
SIGMAR1-204ENST00000461426 SND1-IT1Q9HBX3 110 aa16.35■□□□□ 0.21
SIGMAR1-204ENST00000461426 MRPL55Q7Z7F7 128 aaKnown RBP16.34■□□□□ 0.21
SIGMAR1-204ENST00000461426 NDUFA12Q9UI09 145 aa16.34■□□□□ 0.21
SIGMAR1-204ENST00000461426 FAT3Q8TDW7 4589 aa16.33■□□□□ 0.21
SIGMAR1-204ENST00000461426 LINC00158P58513 81 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms