RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 TRAPPC1Q9Y5R8 145 aa3.46□□□□□ -1.86
SF3A3-202ENST00000460925 IGKV3D-20A0A0C4DH25 116 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 IGHV3-16A0A0C4DH30 117 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 TRBV6-1A0A0K0K1D8 114 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 IGLL5B9A064 214 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 C9JCJ5 164 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 F2Z2F3 143 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 M0R378 163 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 GNRH2O43555 120 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 SMIM13P0DJ93 91 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 CMC4P56277 68 aaPredicted RBP3.45□□□□□ -1.86
SF3A3-202ENST00000460925 DAD1P61803 113 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 TMEM136Q6ZRR5 245 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 FAM19A3Q7Z5A8 133 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 AMN1Q8IY45 258 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 CELA1Q9UNI1 258 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 LENEPQ9Y5L5 61 aa3.45□□□□□ -1.86
SF3A3-202ENST00000460925 PLECQ15149 4684 aaKnown RBP3.45□□□□□ -1.86
SF3A3-202ENST00000460925 IGHV1OR15-1A0A075B7D0 117 aa3.44□□□□□ -1.86
SF3A3-202ENST00000460925 TRAV21A0A0B4J279 112 aa3.44□□□□□ -1.86
SF3A3-202ENST00000460925 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
SF3A3-202ENST00000460925 C19orf71A6NCJ1 209 aa3.44□□□□□ -1.86
SF3A3-202ENST00000460925 H3BVH4 76 aa3.44□□□□□ -1.86
SF3A3-202ENST00000460925 ZNF73O43830 326 aaPredicted RBP3.44□□□□□ -1.86
SF3A3-202ENST00000460925 MT3P25713 68 aa3.44□□□□□ -1.86
SF3A3-202ENST00000460925 LGALS9CQ6DKI2 356 aa3.44□□□□□ -1.86
SF3A3-202ENST00000460925 Q8NAQ8 132 aa3.44□□□□□ -1.86
SF3A3-202ENST00000460925 RNF185Q96GF1 192 aa3.44□□□□□ -1.86
SF3A3-202ENST00000460925 B9D2Q9BPU9 175 aa3.44□□□□□ -1.86
SF3A3-202ENST00000460925 CSMD3Q7Z407 3707 aa3.44□□□□□ -1.86
SF3A3-202ENST00000460925 FBN3Q75N90 2809 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 TRAV9-1A0A075B6T8 112 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 A0A0J9YWU9 116 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 A8MUN3 132 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 H7C423 109 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 LST1O00453 97 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 APCSP02743 223 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 RNASE3P12724 160 aaKnown RBP3.43□□□□□ -1.86
SF3A3-202ENST00000460925 NPC2P61916 151 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 CEMP1Q6PRD7 247 aaPredicted RBP3.43□□□□□ -1.86
SF3A3-202ENST00000460925 C11orf72Q8NBR9 251 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 PGLYRP4Q96LB8 373 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 HIGD1BQ9P298 99 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 LINC00588Q9Y4M8 146 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 V9GYV3 84 aa3.43□□□□□ -1.86
SF3A3-202ENST00000460925 RPL37AP8A6NKH3 93 aa3.42□□□□□ -1.86
SF3A3-202ENST00000460925 H0Y9J4 135 aa3.42□□□□□ -1.86
SF3A3-202ENST00000460925 NDUFS5O43920 106 aa3.42□□□□□ -1.86
SF3A3-202ENST00000460925 SPINK4O60575 86 aa3.42□□□□□ -1.86
SF3A3-202ENST00000460925 INAFM2P0DMQ5 153 aa3.42□□□□□ -1.86
SF3A3-202ENST00000460925 SS18Q15532 418 aa3.42□□□□□ -1.86
SF3A3-202ENST00000460925 ORMDL2Q53FV1 153 aa3.42□□□□□ -1.86
SF3A3-202ENST00000460925 Q6ZTI0 123 aa3.42□□□□□ -1.86
SF3A3-202ENST00000460925 BAGE3Q86Y29 109 aa3.42□□□□□ -1.86
SF3A3-202ENST00000460925 RPP21Q9H633 154 aaKnown RBP3.42□□□□□ -1.86
SF3A3-202ENST00000460925 NOP10Q9NPE3 64 aaKnown RBP3.42□□□□□ -1.86
SF3A3-202ENST00000460925 LY96Q9Y6Y9 160 aa3.42□□□□□ -1.86
SF3A3-202ENST00000460925 TRGV1A0A0A0MS02 117 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 TRBV27A0A0K0K1C4 114 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 LOC100131303A0A0U1RQF7 123 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 M0R381 172 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 IGHV3-53P01767 116 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 ARMS2P0C7Q2 107 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 S100A4P26447 101 aaKnown RBP3.41□□□□□ -1.86
SF3A3-202ENST00000460925 CXCL5P42830 114 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 LINC00313P59037 77 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 LINC01545Q5VT33 79 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 LYZL1Q6UWQ5 148 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 LCA10Q71F78 164 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 TSKUQ8WUA8 353 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 TMEM263Q8WUH6 116 aaKnown RBP3.41□□□□□ -1.86
SF3A3-202ENST00000460925 C16orf74Q96GX8 76 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 CHAC1Q9BUX1 264 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 OSTCQ9NRP0 149 aa3.41□□□□□ -1.86
SF3A3-202ENST00000460925 IGHV3-73A0A0B4J1V6 119 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 HIGD1CA8MV81 97 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 DEFB130BP0DP73 79 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 DEFB130AP0DP74 79 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 MIFP14174 115 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 HTN3P15516 51 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 FXYD2P54710 66 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 PRR3P79522 188 aaKnown RBP3.4□□□□□ -1.87
SF3A3-202ENST00000460925 Q6ZTC4 211 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 PHF5AQ7RTV0 110 aaKnown RBP3.4□□□□□ -1.87
SF3A3-202ENST00000460925 C5orf38Q86SI9 138 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 Q8N377 158 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 LINC00467Q9BRT7 94 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 ALMS1Q8TCU4 4167 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 TGP01266 2768 aa3.4□□□□□ -1.87
SF3A3-202ENST00000460925 DNAH1Q9P2D7 4330 aa3.39□□□□□ -1.87
SF3A3-202ENST00000460925 TRAV8-3A0A0A6YYJ7 113 aa3.39□□□□□ -1.87
SF3A3-202ENST00000460925 TMEM256-PLSCR3K7ERE1 68 aa3.39□□□□□ -1.87
SF3A3-202ENST00000460925 K7ERJ3 54 aa3.39□□□□□ -1.87
SF3A3-202ENST00000460925 ATOX1O00244 68 aa3.39□□□□□ -1.87
SF3A3-202ENST00000460925 MRPS36P82909 103 aaKnown RBP3.39□□□□□ -1.87
SF3A3-202ENST00000460925 Q8N8P6 123 aa3.39□□□□□ -1.87
SF3A3-202ENST00000460925 IL36BQ9NZH7 164 aa3.39□□□□□ -1.87
SF3A3-202ENST00000460925 PHLDA3Q9Y5J5 127 aa3.39□□□□□ -1.87
SF3A3-202ENST00000460925 U3KQK5 164 aa3.39□□□□□ -1.87
SF3A3-202ENST00000460925 KMT2AQ03164 3969 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms