RNA–Protein interactions for RNA: ENST00000460333.5

VPS13D-202, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 4,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-202ENST00000460333 DCANP1Q8TF63 244 aa4.5□□□□□ -1.69
VPS13D-202ENST00000460333 C16orf95Q9H693 158 aa4.5□□□□□ -1.69
VPS13D-202ENST00000460333 DSPP15924 2871 aaKnown RBP4.5□□□□□ -1.69
VPS13D-202ENST00000460333 CELSR3Q9NYQ7 3312 aa4.5□□□□□ -1.69
VPS13D-202ENST00000460333 TRBV7-6A0A0J9YX20 115 aa4.5□□□□□ -1.69
VPS13D-202ENST00000460333 CHKB-CPT1BH3BT56 60 aa4.49□□□□□ -1.69
VPS13D-202ENST00000460333 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.49□□□□□ -1.69
VPS13D-202ENST00000460333 ANKRD17O75179 2603 aaKnown RBP4.49□□□□□ -1.69
VPS13D-202ENST00000460333 DMXL2Q8TDJ6 3036 aa4.49□□□□□ -1.69
VPS13D-202ENST00000460333 IGHV4-28A0A0C4DH34 117 aa4.49□□□□□ -1.69
VPS13D-202ENST00000460333 DEFB114Q30KQ6 69 aa4.49□□□□□ -1.69
VPS13D-202ENST00000460333 DMDP11532 3685 aa4.49□□□□□ -1.69
VPS13D-202ENST00000460333 A8MZ25 164 aa4.49□□□□□ -1.69
VPS13D-202ENST00000460333 PMAIP1Q13794 54 aa4.49□□□□□ -1.69
VPS13D-202ENST00000460333 C4orf26Q17RF5 130 aa4.49□□□□□ -1.69
VPS13D-202ENST00000460333 C6orf99Q4VX62 202 aa4.49□□□□□ -1.69
VPS13D-202ENST00000460333 ADAMTSL4-AS1Q5T5F5 129 aa4.49□□□□□ -1.69
VPS13D-202ENST00000460333 NTM-AS1Q6ZSK4 140 aa4.49□□□□□ -1.69
VPS13D-202ENST00000460333 NHLRC4P0CG21 123 aaPredicted RBP4.48□□□□□ -1.69
VPS13D-202ENST00000460333 TRBV6-4A0A1B0GX49 114 aa4.48□□□□□ -1.69
VPS13D-202ENST00000460333 WIPF1O43516 503 aa4.48□□□□□ -1.69
VPS13D-202ENST00000460333 SCXQ7RTU7 201 aa4.48□□□□□ -1.69
VPS13D-202ENST00000460333 APRG1Q8IVJ8 170 aa4.48□□□□□ -1.69
VPS13D-202ENST00000460333 LINC00846Q9NV44 126 aa4.48□□□□□ -1.69
VPS13D-202ENST00000460333 HELZ2Q9BYK8 2649 aaKnown RBP4.48□□□□□ -1.69
VPS13D-202ENST00000460333 CXCL6P80162 114 aa4.48□□□□□ -1.69
VPS13D-202ENST00000460333 Q8N814 137 aa4.48□□□□□ -1.69
VPS13D-202ENST00000460333 MAP6D1Q9H9H5 199 aa4.48□□□□□ -1.69
VPS13D-202ENST00000460333 ESRGQ1W209 222 aa4.47□□□□□ -1.69
VPS13D-202ENST00000460333 KIR2DL5BQ8NHK3 375 aa4.47□□□□□ -1.69
VPS13D-202ENST00000460333 A6NED7 52 aa4.47□□□□□ -1.69
VPS13D-202ENST00000460333 SMIM1B2RUZ4 78 aa4.47□□□□□ -1.69
VPS13D-202ENST00000460333 WDFY3Q8IZQ1 3526 aa4.47□□□□□ -1.69
VPS13D-202ENST00000460333 USP24Q9UPU5 2620 aa4.47□□□□□ -1.69
VPS13D-202ENST00000460333 A0A087WYN8 130 aa4.46□□□□□ -1.69
VPS13D-202ENST00000460333 NDUFS5O43920 106 aa4.46□□□□□ -1.69
VPS13D-202ENST00000460333 DEFB135Q30KP9 77 aa4.46□□□□□ -1.69
VPS13D-202ENST00000460333 LINC00242Q5T6M2 205 aa4.46□□□□□ -1.69
VPS13D-202ENST00000460333 C11orf45Q8TAV5 145 aa4.46□□□□□ -1.69
VPS13D-202ENST00000460333 FRYQ5TBA9 3013 aa4.46□□□□□ -1.7
VPS13D-202ENST00000460333 PRB2P02812 416 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-202ENST00000460333 KRTAP1-3Q8IUG1 177 aa4.46□□□□□ -1.7
VPS13D-202ENST00000460333 Q8IZM0 81 aa4.46□□□□□ -1.7
VPS13D-202ENST00000460333 TMEM254Q8TBM7 123 aa4.46□□□□□ -1.7
VPS13D-202ENST00000460333 PRR15LQ9BU68 103 aa4.46□□□□□ -1.7
VPS13D-202ENST00000460333 BOD1L1Q8NFC6 3051 aa4.46□□□□□ -1.7
VPS13D-202ENST00000460333 SOSTDC1Q6X4U4 206 aa4.46□□□□□ -1.7
VPS13D-202ENST00000460333 RETNQ9HD89 108 aa4.46□□□□□ -1.7
VPS13D-202ENST00000460333 TRBV6-8A0A0A6YYG3 113 aa4.46□□□□□ -1.7
VPS13D-202ENST00000460333 Q6ZQY7 126 aa4.46□□□□□ -1.7
VPS13D-202ENST00000460333 CHCHD7Q9BUK0 85 aa4.46□□□□□ -1.7
VPS13D-202ENST00000460333 PLAC8L1A1L4L8 177 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 F8WDY8 70 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 C18orf65Q6ZTR6 163 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 CDC42SE2Q9NRR3 84 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 PRO0255Q9UI72 69 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 IGSF10Q6WRI0 2623 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 LOC400499M0QZD8 3231 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 IGLV10-54A0A075B6I4 117 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 A0A096LPF7 62 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 Q8N3U1 123 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 FHL3Q13643 280 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 FAM19A4Q96LR4 140 aa4.45□□□□□ -1.7
VPS13D-202ENST00000460333 FAM19A1Q7Z5A9 133 aa4.44□□□□□ -1.7
VPS13D-202ENST00000460333 CHCHD10Q8WYQ3 142 aaPredicted RBP4.44□□□□□ -1.7
VPS13D-202ENST00000460333 ESM1Q9NQ30 184 aa4.44□□□□□ -1.7
VPS13D-202ENST00000460333 EDN2P20800 178 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 PROK1P58294 105 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 OXLD1Q5BKU9 147 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 Q6ZTI0 123 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 KIF25-AS1Q9Y6Z4 181 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 REG3AQ06141 175 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 CD164L2Q6UWJ8 174 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 DHRS4-AS1Q9P1J3 65 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 IGLV5-39A0A0G2JS06 123 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 LINC01547P58512 204 aaPredicted RBP4.43□□□□□ -1.7
VPS13D-202ENST00000460333 Q6ZVQ6 151 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 LINC01561Q8N1V8 128 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 M0R378 163 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 SPATA3Q8NHX4 192 aa4.43□□□□□ -1.7
VPS13D-202ENST00000460333 IGKV2D-24A0A075B6R9 120 aa4.42□□□□□ -1.7
VPS13D-202ENST00000460333 ATMQ13315 3056 aa4.42□□□□□ -1.7
VPS13D-202ENST00000460333 LINC00959A0A1B0GUT2 108 aa4.42□□□□□ -1.7
VPS13D-202ENST00000460333 A0A087WZ39 114 aa4.42□□□□□ -1.7
VPS13D-202ENST00000460333 LIMD2Q9BT23 127 aa4.42□□□□□ -1.7
VPS13D-202ENST00000460333 LINC01600Q96MT4 127 aa4.41□□□□□ -1.7
VPS13D-202ENST00000460333 NACAE9PAV3 2078 aa4.41□□□□□ -1.7
VPS13D-202ENST00000460333 ZNF73O43830 326 aaPredicted RBP4.41□□□□□ -1.7
VPS13D-202ENST00000460333 LINC00269Q8N2A0 174 aa4.41□□□□□ -1.7
VPS13D-202ENST00000460333 FAM30AQ9NZY2 134 aa4.41□□□□□ -1.7
VPS13D-202ENST00000460333 IGLV5-45A0A087WSX0 123 aa4.41□□□□□ -1.7
VPS13D-202ENST00000460333 LY6G6CO95867 125 aa4.41□□□□□ -1.7
VPS13D-202ENST00000460333 IGLV1-51P01701 117 aa4.41□□□□□ -1.7
VPS13D-202ENST00000460333 COX6A2Q02221 97 aa4.41□□□□□ -1.7
VPS13D-202ENST00000460333 MAST4O15021 2626 aa4.41□□□□□ -1.7
VPS13D-202ENST00000460333 SETXQ7Z333 2677 aaKnown RBP4.41□□□□□ -1.7
VPS13D-202ENST00000460333 WFDC10AQ9H1F0 79 aa4.4□□□□□ -1.7
VPS13D-202ENST00000460333 CR1P17927 2039 aa4.4□□□□□ -1.7
VPS13D-202ENST00000460333 TRAV10A0A0B4J240 114 aa4.4□□□□□ -1.7
VPS13D-202ENST00000460333 ERC2-IT1O76042 136 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms