RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 H0Y9J4 135 aa10.48□□□□□ -0.73
PTPRU-205ENST00000460170 A0A1B0GUV1 79 aa10.48□□□□□ -0.73
PTPRU-205ENST00000460170 SERP2Q8N6R1 65 aa10.48□□□□□ -0.73
PTPRU-205ENST00000460170 KLK9Q2XQG4 91 aa10.48□□□□□ -0.73
PTPRU-205ENST00000460170 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.48□□□□□ -0.73
PTPRU-205ENST00000460170 CHKB-CPT1BH3BT56 60 aa10.48□□□□□ -0.73
PTPRU-205ENST00000460170 V9GYY9 64 aa10.48□□□□□ -0.73
PTPRU-205ENST00000460170 NANOS2P60321 138 aaKnown RBP10.47□□□□□ -0.73
PTPRU-205ENST00000460170 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.47□□□□□ -0.73
PTPRU-205ENST00000460170 FASNP49327 2511 aaKnown RBP10.47□□□□□ -0.73
PTPRU-205ENST00000460170 COL27A1Q8IZC6 1860 aaPredicted RBP10.47□□□□□ -0.73
PTPRU-205ENST00000460170 DHRS4-AS1Q9P1J3 65 aa10.47□□□□□ -0.73
PTPRU-205ENST00000460170 A0A096LNI7 61 aa10.46□□□□□ -0.73
PTPRU-205ENST00000460170 A0A0J9YWU9 116 aa10.46□□□□□ -0.73
PTPRU-205ENST00000460170 FAM236DA0A1B0GTK5 79 aa10.46□□□□□ -0.73
PTPRU-205ENST00000460170 FAM236CP0DP71 79 aa10.46□□□□□ -0.73
PTPRU-205ENST00000460170 PRR3P79522 188 aaKnown RBP10.46□□□□□ -0.73
PTPRU-205ENST00000460170 C3orf84H3BNL1 204 aa10.46□□□□□ -0.74
PTPRU-205ENST00000460170 EGFEM1PQ0D2K5 195 aa10.46□□□□□ -0.74
PTPRU-205ENST00000460170 CCDC179H3BU77 68 aa10.46□□□□□ -0.74
PTPRU-205ENST00000460170 Q6JHZ5 121 aa10.46□□□□□ -0.74
PTPRU-205ENST00000460170 A0A087WYN8 130 aa10.45□□□□□ -0.74
PTPRU-205ENST00000460170 Q8N814 137 aa10.45□□□□□ -0.74
PTPRU-205ENST00000460170 NTM-AS1Q6ZSK4 140 aa10.45□□□□□ -0.74
PTPRU-205ENST00000460170 CHD9Q3L8U1 2897 aa10.45□□□□□ -0.74
PTPRU-205ENST00000460170 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
PTPRU-205ENST00000460170 COX7CP15954 63 aa10.44□□□□□ -0.74
PTPRU-205ENST00000460170 EPG5Q9HCE0 2579 aa10.44□□□□□ -0.74
PTPRU-205ENST00000460170 BPTFQ12830 3046 aa10.43□□□□□ -0.74
PTPRU-205ENST00000460170 TRBV10-3A0A0K0K1G6 114 aa10.43□□□□□ -0.74
PTPRU-205ENST00000460170 M0QXV9 152 aa10.43□□□□□ -0.74
PTPRU-205ENST00000460170 RETNQ9HD89 108 aa10.43□□□□□ -0.74
PTPRU-205ENST00000460170 RPL37AP8A6NKH3 93 aa10.42□□□□□ -0.74
PTPRU-205ENST00000460170 LOC107984640A0A0U1RRK4 108 aa10.41□□□□□ -0.74
PTPRU-205ENST00000460170 Q6ZTC4 211 aa10.4□□□□□ -0.74
PTPRU-205ENST00000460170 LINC01561Q8N1V8 128 aa10.4□□□□□ -0.75
PTPRU-205ENST00000460170 LINC00337Q8N6G1 96 aa10.4□□□□□ -0.75
PTPRU-205ENST00000460170 NDUFC2-KCTD14E9PQ53 114 aa10.39□□□□□ -0.75
PTPRU-205ENST00000460170 Q9UF83 564 aa10.39□□□□□ -0.75
PTPRU-205ENST00000460170 RANBP2P49792 3224 aaKnown RBP10.39□□□□□ -0.75
PTPRU-205ENST00000460170 FHL3Q13643 280 aa10.38□□□□□ -0.75
PTPRU-205ENST00000460170 IGHV3OR16-9A0A0B4J2B5 98 aa10.38□□□□□ -0.75
PTPRU-205ENST00000460170 C6orf223Q8N319 242 aa10.38□□□□□ -0.75
PTPRU-205ENST00000460170 MUC4Q99102 2169 aa10.37□□□□□ -0.75
PTPRU-205ENST00000460170 C4orf48Q5BLP8 95 aa10.37□□□□□ -0.75
PTPRU-205ENST00000460170 IGLV5-45A0A087WSX0 123 aa10.36□□□□□ -0.75
PTPRU-205ENST00000460170 CDIP1Q9H305 208 aa10.36□□□□□ -0.75
PTPRU-205ENST00000460170 LYPD5Q6UWN5 251 aa10.35□□□□□ -0.75
PTPRU-205ENST00000460170 FAM19A3Q7Z5A8 133 aa10.35□□□□□ -0.75
PTPRU-205ENST00000460170 SMCPP49901 116 aaPredicted RBP10.35□□□□□ -0.75
PTPRU-205ENST00000460170 PPDPFQ9H3Y8 114 aa10.35□□□□□ -0.75
PTPRU-205ENST00000460170 A0A087WVE0 104 aa10.34□□□□□ -0.75
PTPRU-205ENST00000460170 NDUFC1O43677 76 aa10.34□□□□□ -0.75
PTPRU-205ENST00000460170 PRO0461Q9UI25 63 aa10.34□□□□□ -0.75
PTPRU-205ENST00000460170 SNURFQ9Y675 71 aa10.34□□□□□ -0.75
PTPRU-205ENST00000460170 WFDC10BQ8IUB3 73 aa10.33□□□□□ -0.76
PTPRU-205ENST00000460170 FSHBP01225 129 aa10.31□□□□□ -0.76
PTPRU-205ENST00000460170 IGKV4-1P06312 121 aa10.31□□□□□ -0.76
PTPRU-205ENST00000460170 C1orf195Q5TG92 126 aa10.31□□□□□ -0.76
PTPRU-205ENST00000460170 C2orf48Q96LS8 159 aa10.31□□□□□ -0.76
PTPRU-205ENST00000460170 LINC00575Q6W349 94 aa10.3□□□□□ -0.76
PTPRU-205ENST00000460170 HRCT1Q6UXD1 115 aa10.3□□□□□ -0.76
PTPRU-205ENST00000460170 WFDC13Q8IUB5 93 aa10.29□□□□□ -0.76
PTPRU-205ENST00000460170 CELA1Q9UNI1 258 aa10.29□□□□□ -0.76
PTPRU-205ENST00000460170 F8WDY8 70 aa10.28□□□□□ -0.76
PTPRU-205ENST00000460170 M0R2N4 97 aa10.28□□□□□ -0.76
PTPRU-205ENST00000460170 LINC00846Q9NV44 126 aa10.28□□□□□ -0.76
PTPRU-205ENST00000460170 A8MTW9 85 aa10.28□□□□□ -0.76
PTPRU-205ENST00000460170 SOSTDC1Q6X4U4 206 aa10.28□□□□□ -0.76
PTPRU-205ENST00000460170 ATP5EP56381 51 aaPredicted RBP10.27□□□□□ -0.76
PTPRU-205ENST00000460170 C1orf137Q5JT78 98 aa10.27□□□□□ -0.76
PTPRU-205ENST00000460170 TRAV7A0A075B6U4 112 aa10.27□□□□□ -0.77
PTPRU-205ENST00000460170 Q6ZRU5 148 aa10.26□□□□□ -0.77
PTPRU-205ENST00000460170 PLAC8L1A1L4L8 177 aa10.26□□□□□ -0.77
PTPRU-205ENST00000460170 LINC00474Q9P2X8 69 aa10.26□□□□□ -0.77
PTPRU-205ENST00000460170 TRANK1O15050 2925 aa10.25□□□□□ -0.77
PTPRU-205ENST00000460170 X6R8D5 127 aa10.25□□□□□ -0.77
PTPRU-205ENST00000460170 ZNF706Q9Y5V0 76 aaPredicted RBP10.24□□□□□ -0.77
PTPRU-205ENST00000460170 TRBV7-7A0A0K0K1E9 115 aa10.24□□□□□ -0.77
PTPRU-205ENST00000460170 REG3GQ6UW15 175 aa10.24□□□□□ -0.77
PTPRU-205ENST00000460170 SBSPONQ8IVN8 264 aa10.24□□□□□ -0.77
PTPRU-205ENST00000460170 MKI67P46013 3256 aaKnown RBP10.24□□□□□ -0.77
PTPRU-205ENST00000460170 LRCOL1A6NCL2 159 aa10.23□□□□□ -0.77
PTPRU-205ENST00000460170 Q8N3U1 123 aa10.22□□□□□ -0.77
PTPRU-205ENST00000460170 A0A0C4DFX4 3053 aa10.22□□□□□ -0.77
PTPRU-205ENST00000460170 SEC61GP60059 68 aa10.22□□□□□ -0.77
PTPRU-205ENST00000460170 C7orf33Q8WU49 177 aa10.22□□□□□ -0.77
PTPRU-205ENST00000460170 LAMA3Q16787 3333 aa10.22□□□□□ -0.77
PTPRU-205ENST00000460170 PRR4Q16378 134 aa10.21□□□□□ -0.77
PTPRU-205ENST00000460170 Q6ZVQ6 151 aa10.21□□□□□ -0.78
PTPRU-205ENST00000460170 FAM218AQ96MZ4 157 aa10.21□□□□□ -0.78
PTPRU-205ENST00000460170 FAM30AQ9NZY2 134 aa10.2□□□□□ -0.78
PTPRU-205ENST00000460170 LITAFQ99732 161 aa10.2□□□□□ -0.78
PTPRU-205ENST00000460170 A6NED7 52 aa10.2□□□□□ -0.78
PTPRU-205ENST00000460170 PRYO14603 147 aa10.19□□□□□ -0.78
PTPRU-205ENST00000460170 IGLV9-49A0A0B4J1Y8 123 aa10.19□□□□□ -0.78
PTPRU-205ENST00000460170 SPINK6Q6UWN8 80 aa10.19□□□□□ -0.78
PTPRU-205ENST00000460170 C10orf25Q5T742 122 aa10.19□□□□□ -0.78
PTPRU-205ENST00000460170 SMIM26A0A096LP01 95 aa10.18□□□□□ -0.78
PTPRU-205ENST00000460170 NUPR2A6NF83 97 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms