RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ODF1Q14990 250 aa8.19□□□□□ -1.1
COL18A1-206ENST00000459895 COA6Q5JTJ3 125 aaKnown RBP8.19□□□□□ -1.1
COL18A1-206ENST00000459895 UNQ6190/PRO20217Q6UXQ8 127 aa8.19□□□□□ -1.1
COL18A1-206ENST00000459895 HSPB8Q9UJY1 196 aa8.19□□□□□ -1.1
COL18A1-206ENST00000459895 ABCA13Q86UQ4 5058 aa8.19□□□□□ -1.1
COL18A1-206ENST00000459895 H3BRM9 83 aa8.18□□□□□ -1.1
COL18A1-206ENST00000459895 PRSS2P07478 247 aa8.18□□□□□ -1.1
COL18A1-206ENST00000459895 CIRBP-AS1Q8TBR5 109 aa8.18□□□□□ -1.1
COL18A1-206ENST00000459895 IGLV5-39A0A0G2JS06 123 aa8.17□□□□□ -1.1
COL18A1-206ENST00000459895 F8WDY8 70 aa8.17□□□□□ -1.1
COL18A1-206ENST00000459895 RPL18AQ02543 176 aaKnown RBP8.17□□□□□ -1.1
COL18A1-206ENST00000459895 TMEM170BQ5T4T1 132 aa8.17□□□□□ -1.1
COL18A1-206ENST00000459895 COX7B2Q8TF08 81 aa8.17□□□□□ -1.1
COL18A1-206ENST00000459895 FAT1Q14517 4588 aa8.17□□□□□ -1.1
COL18A1-206ENST00000459895 LOC107984640A0A0U1RRK4 108 aa8.16□□□□□ -1.1
COL18A1-206ENST00000459895 PMCHL2Q9BQD1 86 aa8.16□□□□□ -1.1
COL18A1-206ENST00000459895 PKIGQ9Y2B9 76 aa8.16□□□□□ -1.1
COL18A1-206ENST00000459895 VPS13BQ7Z7G8 4022 aa8.16□□□□□ -1.1
COL18A1-206ENST00000459895 TRBV30A0A0K0K1B3 111 aa8.15□□□□□ -1.1
COL18A1-206ENST00000459895 SMR3BP02814 79 aaPredicted RBP8.15□□□□□ -1.1
COL18A1-206ENST00000459895 PTTG1IPP53801 180 aa8.15□□□□□ -1.1
COL18A1-206ENST00000459895 CXCL5P42830 114 aa8.14□□□□□ -1.11
COL18A1-206ENST00000459895 CKS1BP61024 79 aa8.14□□□□□ -1.11
COL18A1-206ENST00000459895 RNF151Q2KHN1 245 aa8.14□□□□□ -1.11
COL18A1-206ENST00000459895 MAJINQ3KP22 176 aa8.14□□□□□ -1.11
COL18A1-206ENST00000459895 C9orf116Q5BN46 136 aaPredicted RBP8.14□□□□□ -1.11
COL18A1-206ENST00000459895 C6orf226Q5I0X4 101 aa8.14□□□□□ -1.11
COL18A1-206ENST00000459895 Q8N1X5 172 aa8.14□□□□□ -1.11
COL18A1-206ENST00000459895 MAP1LC3CQ9BXW4 147 aa8.14□□□□□ -1.11
COL18A1-206ENST00000459895 A0A087WYN8 130 aa8.13□□□□□ -1.11
COL18A1-206ENST00000459895 TMEM223A0PJW6 202 aa8.13□□□□□ -1.11
COL18A1-206ENST00000459895 PLNP26678 52 aa8.13□□□□□ -1.11
COL18A1-206ENST00000459895 GAGE2BQ13066 116 aa8.13□□□□□ -1.11
COL18A1-206ENST00000459895 Q5VSD8 79 aa8.13□□□□□ -1.11
COL18A1-206ENST00000459895 Q6ZRP5 223 aa8.13□□□□□ -1.11
COL18A1-206ENST00000459895 LINC00528Q8N1L1 170 aa8.13□□□□□ -1.11
COL18A1-206ENST00000459895 KRTAP4-5Q9BYR2 181 aa8.13□□□□□ -1.11
COL18A1-206ENST00000459895 SYS1-DBNDD2H3BUS1 97 aa8.12□□□□□ -1.11
COL18A1-206ENST00000459895 TLX1NBP0CAT3 122 aa8.12□□□□□ -1.11
COL18A1-206ENST00000459895 PCLOQ9Y6V0 5065 aa8.12□□□□□ -1.11
COL18A1-206ENST00000459895 DPM2O94777 84 aa8.11□□□□□ -1.11
COL18A1-206ENST00000459895 STPG4Q8N801 248 aa8.11□□□□□ -1.11
COL18A1-206ENST00000459895 PLAC8Q9NZF1 115 aa8.11□□□□□ -1.11
COL18A1-206ENST00000459895 NDUFC2-KCTD14E9PQ53 114 aa8.1□□□□□ -1.11
COL18A1-206ENST00000459895 IGKCP01834 107 aa8.1□□□□□ -1.11
COL18A1-206ENST00000459895 C3orf79P0CE67 100 aa8.1□□□□□ -1.11
COL18A1-206ENST00000459895 TSPEAR-AS2P59090 65 aa8.1□□□□□ -1.11
COL18A1-206ENST00000459895 HIST3H2BBQ8N257 126 aa8.1□□□□□ -1.11
COL18A1-206ENST00000459895 LINC00474Q9P2X8 69 aa8.1□□□□□ -1.11
COL18A1-206ENST00000459895 KRTDAPP60985 99 aa8.09□□□□□ -1.11
COL18A1-206ENST00000459895 GAGE2EQ4V326 116 aa8.09□□□□□ -1.11
COL18A1-206ENST00000459895 LINC01545Q5VT33 79 aa8.09□□□□□ -1.11
COL18A1-206ENST00000459895 GAGE2DQ9UEU5 116 aa8.09□□□□□ -1.11
COL18A1-206ENST00000459895 FAM168BA1KXE4 195 aa8.08□□□□□ -1.12
COL18A1-206ENST00000459895 ZNF625Q96I27 306 aaPredicted RBP8.08□□□□□ -1.12
COL18A1-206ENST00000459895 PKHD1L1Q86WI1 4243 aa8.07□□□□□ -1.12
COL18A1-206ENST00000459895 EPM2AB3EWF7 344 aa8.07□□□□□ -1.12
COL18A1-206ENST00000459895 C9orf129Q5T035 196 aaKnown RBP8.07□□□□□ -1.12
COL18A1-206ENST00000459895 PET117Q6UWS5 81 aa8.07□□□□□ -1.12
COL18A1-206ENST00000459895 HIST1H2BLQ99880 126 aa8.07□□□□□ -1.12
COL18A1-206ENST00000459895 A0A1W2PNN7 141 aa8.06□□□□□ -1.12
COL18A1-206ENST00000459895 S100A6P06703 90 aa8.06□□□□□ -1.12
COL18A1-206ENST00000459895 FAM19A5Q7Z5A7 132 aaPredicted RBP8.06□□□□□ -1.12
COL18A1-206ENST00000459895 DPH3Q96FX2 82 aa8.06□□□□□ -1.12
COL18A1-206ENST00000459895 KRTAP10-4P60372 401 aaPredicted RBP8.05□□□□□ -1.12
COL18A1-206ENST00000459895 HERVK_113P61574 105 aa8.05□□□□□ -1.12
COL18A1-206ENST00000459895 XAGE1AQ9HD64 81 aa8.05□□□□□ -1.12
COL18A1-206ENST00000459895 ERG28Q9UKR5 140 aa8.05□□□□□ -1.12
COL18A1-206ENST00000459895 FAM229AH3BQW9 127 aa8.04□□□□□ -1.12
COL18A1-206ENST00000459895 S100A2P29034 98 aa8.04□□□□□ -1.12
COL18A1-206ENST00000459895 SFTA2Q6UW10 78 aa8.04□□□□□ -1.12
COL18A1-206ENST00000459895 KRTAP7-1Q8IUC3 87 aa8.04□□□□□ -1.12
COL18A1-206ENST00000459895 LEPROTO15243 131 aa8.03□□□□□ -1.12
COL18A1-206ENST00000459895 PFN2P35080 140 aa8.03□□□□□ -1.12
COL18A1-206ENST00000459895 RPL37AP61513 92 aaKnown RBP8.03□□□□□ -1.12
COL18A1-206ENST00000459895 SNRPEP62304 92 aaKnown RBP8.03□□□□□ -1.12
COL18A1-206ENST00000459895 SERTAD4-AS1Q5TG53 156 aa8.03□□□□□ -1.12
COL18A1-206ENST00000459895 C20orf202A1L168 122 aa8.02□□□□□ -1.13
COL18A1-206ENST00000459895 J3QQQ9 107 aa8.02□□□□□ -1.13
COL18A1-206ENST00000459895 M0QXV9 152 aa8.02□□□□□ -1.13
COL18A1-206ENST00000459895 PHF5AQ7RTV0 110 aaKnown RBP8.02□□□□□ -1.13
COL18A1-206ENST00000459895 PLEKHB2Q96CS7 222 aa8.02□□□□□ -1.13
COL18A1-206ENST00000459895 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
COL18A1-206ENST00000459895 C5orf52A6NGY3 159 aa8.01□□□□□ -1.13
COL18A1-206ENST00000459895 E9PLD3 99 aa8.01□□□□□ -1.13
COL18A1-206ENST00000459895 PLA2G1BP04054 148 aaKnown RBP8.01□□□□□ -1.13
COL18A1-206ENST00000459895 ATOH7Q8N100 152 aa8.01□□□□□ -1.13
COL18A1-206ENST00000459895 C7orf33Q8WU49 177 aa8.01□□□□□ -1.13
COL18A1-206ENST00000459895 SRRM2Q9UQ35 2752 aaKnown RBP8.01□□□□□ -1.13
COL18A1-206ENST00000459895 LGALS3P17931 250 aaKnown RBP8□□□□□ -1.13
COL18A1-206ENST00000459895 PRR3P79522 188 aaKnown RBP8□□□□□ -1.13
COL18A1-206ENST00000459895 IGKV2D-26A0A0A0MRZ7 120 aa7.99□□□□□ -1.13
COL18A1-206ENST00000459895 A0A0U1RRA0 63 aa7.99□□□□□ -1.13
COL18A1-206ENST00000459895 HNRNPA3P51991 378 aaKnown RBP7.99□□□□□ -1.13
COL18A1-206ENST00000459895 MEIG1Q5JSS6 88 aa7.99□□□□□ -1.13
COL18A1-206ENST00000459895 SND1-IT1Q9HBX3 110 aa7.99□□□□□ -1.13
COL18A1-206ENST00000459895 MYCBP2O75592 4640 aa7.98□□□□□ -1.13
COL18A1-206ENST00000459895 MYMXA0A1B0GTQ4 84 aa7.98□□□□□ -1.13
COL18A1-206ENST00000459895 SMIM13P0DJ93 91 aa7.98□□□□□ -1.13
COL18A1-206ENST00000459895 NMUP48645 174 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms