RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 CSNK1G2-AS1Q8NCQ2 148 aa13.66□□□□□ -0.22
CNEP1R1-203ENST00000458059 TRBV7-7A0A0K0K1E9 115 aa13.65□□□□□ -0.22
CNEP1R1-203ENST00000458059 HECTD1Q9ULT8 2610 aa13.65□□□□□ -0.22
CNEP1R1-203ENST00000458059 IGKV3D-7A0A0C4DH55 119 aa13.65□□□□□ -0.22
CNEP1R1-203ENST00000458059 MRPL23Q16540 153 aaKnown RBP13.65□□□□□ -0.22
CNEP1R1-203ENST00000458059 SDIM1Q6ZPB5 146 aa13.65□□□□□ -0.22
CNEP1R1-203ENST00000458059 LINC00959A0A1B0GUT2 108 aa13.64□□□□□ -0.23
CNEP1R1-203ENST00000458059 IGLV1-51P01701 117 aa13.64□□□□□ -0.23
CNEP1R1-203ENST00000458059 RNASE1P07998 156 aaKnown RBP13.63□□□□□ -0.23
CNEP1R1-203ENST00000458059 LINC00643Q86TS7 51 aa13.62□□□□□ -0.23
CNEP1R1-203ENST00000458059 ACYP1P07311 99 aa13.62□□□□□ -0.23
CNEP1R1-203ENST00000458059 PDZD2O15018 2839 aa13.62□□□□□ -0.23
CNEP1R1-203ENST00000458059 A0A087WZ39 114 aa13.61□□□□□ -0.23
CNEP1R1-203ENST00000458059 TMEM86BQ8N661 226 aa13.61□□□□□ -0.23
CNEP1R1-203ENST00000458059 TENM1Q9UKZ4 2725 aa13.61□□□□□ -0.23
CNEP1R1-203ENST00000458059 C9orf116Q5BN46 136 aaPredicted RBP13.61□□□□□ -0.23
CNEP1R1-203ENST00000458059 LRRC75A-AS1Q8N1F1 130 aa13.61□□□□□ -0.23
CNEP1R1-203ENST00000458059 LINC00482Q8N8I6 264 aa13.61□□□□□ -0.23
CNEP1R1-203ENST00000458059 ATRQ13535 2644 aa13.6□□□□□ -0.23
CNEP1R1-203ENST00000458059 SMR3AQ99954 134 aa13.6□□□□□ -0.23
CNEP1R1-203ENST00000458059 UNC79Q9P2D8 2635 aa13.6□□□□□ -0.23
CNEP1R1-203ENST00000458059 OVOL2Q9BRP0 275 aa13.59□□□□□ -0.23
CNEP1R1-203ENST00000458059 INAFM2P0DMQ5 153 aa13.59□□□□□ -0.23
CNEP1R1-203ENST00000458059 LINC00526Q96FQ7 95 aa13.58□□□□□ -0.24
CNEP1R1-203ENST00000458059 IBA57-AS1B1ANH7 110 aa13.58□□□□□ -0.24
CNEP1R1-203ENST00000458059 PF4P02776 101 aa13.58□□□□□ -0.24
CNEP1R1-203ENST00000458059 FAM222AQ5U5X8 452 aa13.58□□□□□ -0.24
CNEP1R1-203ENST00000458059 A0A087WVE0 104 aa13.57□□□□□ -0.24
CNEP1R1-203ENST00000458059 SPATA3Q8NHX4 192 aa13.57□□□□□ -0.24
CNEP1R1-203ENST00000458059 ANK3Q12955 4377 aaKnown RBP13.57□□□□□ -0.24
CNEP1R1-203ENST00000458059 LINC00269Q8N2A0 174 aa13.56□□□□□ -0.24
CNEP1R1-203ENST00000458059 KLK5Q9Y337 293 aaPredicted RBP13.56□□□□□ -0.24
CNEP1R1-203ENST00000458059 C9orf153Q5TBE3 101 aa13.56□□□□□ -0.24
CNEP1R1-203ENST00000458059 LINC00846Q9NV44 126 aa13.56□□□□□ -0.24
CNEP1R1-203ENST00000458059 SS18Q15532 418 aa13.55□□□□□ -0.24
CNEP1R1-203ENST00000458059 HTN3P15516 51 aa13.53□□□□□ -0.24
CNEP1R1-203ENST00000458059 ANGP03950 147 aaKnown RBP13.52□□□□□ -0.25
CNEP1R1-203ENST00000458059 DEFB135Q30KP9 77 aa13.52□□□□□ -0.25
CNEP1R1-203ENST00000458059 KRTAP1-1Q07627 177 aa13.51□□□□□ -0.25
CNEP1R1-203ENST00000458059 H0YGX0 51 aa13.51□□□□□ -0.25
CNEP1R1-203ENST00000458059 CXCL5P42830 114 aa13.51□□□□□ -0.25
CNEP1R1-203ENST00000458059 CMC4P56277 68 aaPredicted RBP13.51□□□□□ -0.25
CNEP1R1-203ENST00000458059 KRTAP10-3P60369 221 aa13.5□□□□□ -0.25
CNEP1R1-203ENST00000458059 WFDC9Q8NEX5 89 aa13.5□□□□□ -0.25
CNEP1R1-203ENST00000458059 TEP1Q99973 2627 aaKnown RBP13.49□□□□□ -0.25
CNEP1R1-203ENST00000458059 IMUPQ9GZP8 106 aa13.49□□□□□ -0.25
CNEP1R1-203ENST00000458059 ORMDL1Q9P0S3 153 aa13.47□□□□□ -0.25
CNEP1R1-203ENST00000458059 TRRAPQ9Y4A5 3859 aa13.47□□□□□ -0.25
CNEP1R1-203ENST00000458059 OTOGQ6ZRI0 2925 aa13.47□□□□□ -0.25
CNEP1R1-203ENST00000458059 CFAP161Q6P656 301 aa13.47□□□□□ -0.25
CNEP1R1-203ENST00000458059 C6orf223Q8N319 242 aa13.47□□□□□ -0.25
CNEP1R1-203ENST00000458059 X6R8D5 127 aa13.47□□□□□ -0.25
CNEP1R1-203ENST00000458059 HIST1H4AP62805 103 aaKnown RBP13.47□□□□□ -0.25
CNEP1R1-203ENST00000458059 Q8NDZ9 215 aa13.47□□□□□ -0.25
CNEP1R1-203ENST00000458059 C3orf22Q8N5N4 141 aa13.46□□□□□ -0.25
CNEP1R1-203ENST00000458059 SVIPQ8NHG7 77 aa13.46□□□□□ -0.25
CNEP1R1-203ENST00000458059 CHCHD10Q8WYQ3 142 aaPredicted RBP13.46□□□□□ -0.25
CNEP1R1-203ENST00000458059 PRO0255Q9UI72 69 aa13.46□□□□□ -0.25
CNEP1R1-203ENST00000458059 NANOS2P60321 138 aaKnown RBP13.45□□□□□ -0.26
CNEP1R1-203ENST00000458059 HIVEP1P15822 2718 aa13.44□□□□□ -0.26
CNEP1R1-203ENST00000458059 Q8IZM0 81 aa13.44□□□□□ -0.26
CNEP1R1-203ENST00000458059 PKD1L1Q8TDX9 2849 aa13.43□□□□□ -0.26
CNEP1R1-203ENST00000458059 C6orf99Q4VX62 202 aa13.43□□□□□ -0.26
CNEP1R1-203ENST00000458059 CYSTM1Q9H1C7 97 aa13.43□□□□□ -0.26
CNEP1R1-203ENST00000458059 A0A1B0GX51 115 aa13.42□□□□□ -0.26
CNEP1R1-203ENST00000458059 hADV29S1A0JD25 119 aa13.42□□□□□ -0.26
CNEP1R1-203ENST00000458059 REG3AQ06141 175 aa13.42□□□□□ -0.26
CNEP1R1-203ENST00000458059 C10orf25Q5T742 122 aa13.42□□□□□ -0.26
CNEP1R1-203ENST00000458059 KIR2DL5BQ8NHK3 375 aa13.42□□□□□ -0.26
CNEP1R1-203ENST00000458059 C16orf95Q9H693 158 aa13.42□□□□□ -0.26
CNEP1R1-203ENST00000458059 HILS1P60008 231 aa13.41□□□□□ -0.26
CNEP1R1-203ENST00000458059 FAM110AQ9BQ89 295 aa13.41□□□□□ -0.26
CNEP1R1-203ENST00000458059 UQCRQO14949 82 aa13.4□□□□□ -0.26
CNEP1R1-203ENST00000458059 KIAA0087Q14695 138 aa13.4□□□□□ -0.26
CNEP1R1-203ENST00000458059 S100A7L2Q5SY68 101 aa13.4□□□□□ -0.26
CNEP1R1-203ENST00000458059 UNQ6190/PRO20217Q6UXQ8 127 aa13.4□□□□□ -0.26
CNEP1R1-203ENST00000458059 Q8N814 137 aa13.39□□□□□ -0.27
CNEP1R1-203ENST00000458059 CELA1Q9UNI1 258 aa13.39□□□□□ -0.27
CNEP1R1-203ENST00000458059 LOC107984640A0A0U1RRK4 108 aa13.39□□□□□ -0.27
CNEP1R1-203ENST00000458059 A0A1B0GUV1 79 aa13.39□□□□□ -0.27
CNEP1R1-203ENST00000458059 PPDPFQ9H3Y8 114 aa13.39□□□□□ -0.27
CNEP1R1-203ENST00000458059 LY6G6DO95868 133 aa13.38□□□□□ -0.27
CNEP1R1-203ENST00000458059 CD164L2Q6UWJ8 174 aa13.37□□□□□ -0.27
CNEP1R1-203ENST00000458059 COX7CP15954 63 aa13.37□□□□□ -0.27
CNEP1R1-203ENST00000458059 DAD1P61803 113 aa13.37□□□□□ -0.27
CNEP1R1-203ENST00000458059 OBSCN-AS1Q96MR7 158 aa13.37□□□□□ -0.27
CNEP1R1-203ENST00000458059 LINC01561Q8N1V8 128 aa13.36□□□□□ -0.27
CNEP1R1-203ENST00000458059 IGHV4-28A0A0C4DH34 117 aa13.36□□□□□ -0.27
CNEP1R1-203ENST00000458059 RPL18AQ02543 176 aaKnown RBP13.35□□□□□ -0.27
CNEP1R1-203ENST00000458059 C2orf48Q96LS8 159 aa13.35□□□□□ -0.27
CNEP1R1-203ENST00000458059 KLK12Q9UKR0 248 aa13.35□□□□□ -0.27
CNEP1R1-203ENST00000458059 TMEM126AQ9H061 195 aa13.35□□□□□ -0.27
CNEP1R1-203ENST00000458059 LINC00612Q8N6U2 182 aa13.34□□□□□ -0.27
CNEP1R1-203ENST00000458059 XAGE1AQ9HD64 81 aa13.34□□□□□ -0.27
CNEP1R1-203ENST00000458059 FAM19A1Q7Z5A9 133 aa13.34□□□□□ -0.27
CNEP1R1-203ENST00000458059 TRAV23DV6A0A075B6W5 121 aa13.33□□□□□ -0.28
CNEP1R1-203ENST00000458059 ATOX1O00244 68 aa13.33□□□□□ -0.28
CNEP1R1-203ENST00000458059 SPAG11BQ08648 103 aa13.33□□□□□ -0.28
CNEP1R1-203ENST00000458059 Q6JHZ5 121 aa13.33□□□□□ -0.28
CNEP1R1-203ENST00000458059 NSD1Q96L73 2696 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms