RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 DIRC1Q969H9 104 aa7.22□□□□□ -1.25
PDGFB-204ENST00000455790 ALKBH7Q9BT30 221 aaPredicted RBP7.22□□□□□ -1.25
PDGFB-204ENST00000455790 XAGE1AQ9HD64 81 aa7.22□□□□□ -1.25
PDGFB-204ENST00000455790 TRAV9-1A0A075B6T8 112 aa7.21□□□□□ -1.26
PDGFB-204ENST00000455790 HERVK_113P63121 156 aa7.21□□□□□ -1.26
PDGFB-204ENST00000455790 C6orf226Q5I0X4 101 aa7.21□□□□□ -1.26
PDGFB-204ENST00000455790 GEMIN7Q9H840 131 aaKnown RBP7.21□□□□□ -1.26
PDGFB-204ENST00000455790 SMIM1B2RUZ4 78 aa7.2□□□□□ -1.26
PDGFB-204ENST00000455790 KRTAP1-4P0C5Y4 121 aa7.2□□□□□ -1.26
PDGFB-204ENST00000455790 PAPPA-AS1Q5QFB9 102 aa7.2□□□□□ -1.26
PDGFB-204ENST00000455790 ERASQ7Z444 233 aa7.2□□□□□ -1.26
PDGFB-204ENST00000455790 SCGB3A1Q96QR1 104 aa7.2□□□□□ -1.26
PDGFB-204ENST00000455790 LINC01546A6NGU7 62 aa7.19□□□□□ -1.26
PDGFB-204ENST00000455790 F8VRH5 84 aa7.19□□□□□ -1.26
PDGFB-204ENST00000455790 SEC11AP67812 179 aa7.19□□□□□ -1.26
PDGFB-204ENST00000455790 SEC11CQ9BY50 192 aa7.19□□□□□ -1.26
PDGFB-204ENST00000455790 GNB1LQ9BYB4 327 aa7.19□□□□□ -1.26
PDGFB-204ENST00000455790 IGLV5-45A0A087WSX0 123 aa7.18□□□□□ -1.26
PDGFB-204ENST00000455790 G0S2P27469 103 aa7.18□□□□□ -1.26
PDGFB-204ENST00000455790 COMMD7Q86VX2 200 aa7.18□□□□□ -1.26
PDGFB-204ENST00000455790 C22orf24Q9Y442 160 aa7.18□□□□□ -1.26
PDGFB-204ENST00000455790 LPAP08519 4548 aa7.18□□□□□ -1.26
PDGFB-204ENST00000455790 TINCRA0A1B0GVN0 87 aa7.17□□□□□ -1.26
PDGFB-204ENST00000455790 S100PP25815 95 aa7.17□□□□□ -1.26
PDGFB-204ENST00000455790 CST9LQ9H4G1 147 aa7.17□□□□□ -1.26
PDGFB-204ENST00000455790 SPINK8P0C7L1 97 aa7.16□□□□□ -1.26
PDGFB-204ENST00000455790 COX7B2Q8TF08 81 aa7.16□□□□□ -1.26
PDGFB-204ENST00000455790 MRPL18Q9H0U6 180 aaKnown RBP7.16□□□□□ -1.26
PDGFB-204ENST00000455790 CXCL5P42830 114 aa7.15□□□□□ -1.26
PDGFB-204ENST00000455790 PDZD11Q5EBL8 140 aa7.15□□□□□ -1.26
PDGFB-204ENST00000455790 FA2HQ7L5A8 372 aa7.15□□□□□ -1.26
PDGFB-204ENST00000455790 IGLV1-50A0A075B6I6 118 aa7.14□□□□□ -1.27
PDGFB-204ENST00000455790 A0A096LNJ9 63 aa7.14□□□□□ -1.27
PDGFB-204ENST00000455790 FABP9Q0Z7S8 132 aa7.14□□□□□ -1.27
PDGFB-204ENST00000455790 PMVKQ15126 192 aa7.14□□□□□ -1.27
PDGFB-204ENST00000455790 C10orf91Q5T1B1 145 aa7.14□□□□□ -1.27
PDGFB-204ENST00000455790 RPS10P5Q9NQ39 176 aa7.14□□□□□ -1.27
PDGFB-204ENST00000455790 CARHSP1Q9Y2V2 147 aaKnown RBP7.14□□□□□ -1.27
PDGFB-204ENST00000455790 ZNF861PO60384 105 aa7.13□□□□□ -1.27
PDGFB-204ENST00000455790 RHEBQ15382 184 aa7.13□□□□□ -1.27
PDGFB-204ENST00000455790 MRPL55Q7Z7F7 128 aaKnown RBP7.13□□□□□ -1.27
PDGFB-204ENST00000455790 URB1-AS1Q96HZ7 61 aa7.13□□□□□ -1.27
PDGFB-204ENST00000455790 SMCO4Q9NRQ5 59 aa7.13□□□□□ -1.27
PDGFB-204ENST00000455790 TP73-AS1Q9UF72 201 aa7.13□□□□□ -1.27
PDGFB-204ENST00000455790 RAB5BP61020 215 aa7.12□□□□□ -1.27
PDGFB-204ENST00000455790 COX19Q49B96 90 aa7.12□□□□□ -1.27
PDGFB-204ENST00000455790 LBHQ53QV2 105 aaPredicted RBP7.12□□□□□ -1.27
PDGFB-204ENST00000455790 GAGE10A6NGK3 116 aa7.11□□□□□ -1.27
PDGFB-204ENST00000455790 LINC01549A6NIU2 74 aa7.11□□□□□ -1.27
PDGFB-204ENST00000455790 RPL37AP8A6NKH3 93 aa7.11□□□□□ -1.27
PDGFB-204ENST00000455790 NUPR1O60356 82 aa7.11□□□□□ -1.27
PDGFB-204ENST00000455790 PMCHL1Q16048 86 aa7.11□□□□□ -1.27
PDGFB-204ENST00000455790 LINC00167Q96N53 147 aa7.11□□□□□ -1.27
PDGFB-204ENST00000455790 BCE1O60756 84 aa7.1□□□□□ -1.27
PDGFB-204ENST00000455790 SCO1O75880 301 aa7.1□□□□□ -1.27
PDGFB-204ENST00000455790 IGLC3P0DOY3 106 aa7.1□□□□□ -1.27
PDGFB-204ENST00000455790 C18orf32Q8TCD1 76 aa7.1□□□□□ -1.27
PDGFB-204ENST00000455790 IGLV5-39A0A0G2JS06 123 aa7.09□□□□□ -1.27
PDGFB-204ENST00000455790 ZNF22P17026 224 aaPredicted RBP7.09□□□□□ -1.27
PDGFB-204ENST00000455790 NDUFA6P56556 154 aa7.09□□□□□ -1.27
PDGFB-204ENST00000455790 IGLV5-37A0A075B6J1 123 aa7.08□□□□□ -1.28
PDGFB-204ENST00000455790 A0A087X002 238 aa7.08□□□□□ -1.28
PDGFB-204ENST00000455790 H3BRM9 83 aa7.08□□□□□ -1.28
PDGFB-204ENST00000455790 ATP5LO75964 103 aa7.08□□□□□ -1.28
PDGFB-204ENST00000455790 RPL13AP40429 203 aaKnown RBP7.08□□□□□ -1.28
PDGFB-204ENST00000455790 TRAPPC1Q9Y5R8 145 aa7.08□□□□□ -1.28
PDGFB-204ENST00000455790 HBDP02042 147 aa7.07□□□□□ -1.28
PDGFB-204ENST00000455790 PFN2P35080 140 aa7.07□□□□□ -1.28
PDGFB-204ENST00000455790 RPL28P46779 137 aaKnown RBP7.07□□□□□ -1.28
PDGFB-204ENST00000455790 C11orf86A6NJI1 115 aa7.06□□□□□ -1.28
PDGFB-204ENST00000455790 LINC00614P0C842 121 aa7.06□□□□□ -1.28
PDGFB-204ENST00000455790 KRTAP13-1Q8IUC0 172 aa7.06□□□□□ -1.28
PDGFB-204ENST00000455790 ANAPC11Q9NYG5 84 aa7.06□□□□□ -1.28
PDGFB-204ENST00000455790 IGKV2-28A0A075B6P5 120 aa7.05□□□□□ -1.28
PDGFB-204ENST00000455790 IGKV2D-28P01615 120 aa7.05□□□□□ -1.28
PDGFB-204ENST00000455790 APOC3P02656 99 aa7.05□□□□□ -1.28
PDGFB-204ENST00000455790 NKAPP1Q8N9T2 125 aa7.05□□□□□ -1.28
PDGFB-204ENST00000455790 Q8NDZ9 215 aa7.05□□□□□ -1.28
PDGFB-204ENST00000455790 ZNF625Q96I27 306 aaPredicted RBP7.05□□□□□ -1.28
PDGFB-204ENST00000455790 SND1-IT1Q9HBX3 110 aa7.05□□□□□ -1.28
PDGFB-204ENST00000455790 ERG28Q9UKR5 140 aa7.05□□□□□ -1.28
PDGFB-204ENST00000455790 VPREB1P12018 145 aa7.04□□□□□ -1.28
PDGFB-204ENST00000455790 PRR4Q16378 134 aa7.04□□□□□ -1.28
PDGFB-204ENST00000455790 TSPAN13O95857 204 aa7.03□□□□□ -1.28
PDGFB-204ENST00000455790 TMEM170BQ5T4T1 132 aa7.03□□□□□ -1.28
PDGFB-204ENST00000455790 BAGE3Q86Y29 109 aa7.03□□□□□ -1.28
PDGFB-204ENST00000455790 YPEL4Q96NS1 127 aa7.03□□□□□ -1.28
PDGFB-204ENST00000455790 TMEM238C9JI98 176 aa7.02□□□□□ -1.29
PDGFB-204ENST00000455790 UBE2AP49459 152 aa7.02□□□□□ -1.29
PDGFB-204ENST00000455790 PRLHP81277 87 aa7.02□□□□□ -1.29
PDGFB-204ENST00000455790 KRTAP13-2Q52LG2 175 aa7.02□□□□□ -1.29
PDGFB-204ENST00000455790 SNAPINO95295 136 aa7.01□□□□□ -1.29
PDGFB-204ENST00000455790 SVBPQ8N300 66 aa7.01□□□□□ -1.29
PDGFB-204ENST00000455790 CRYGAP11844 174 aa7□□□□□ -1.29
PDGFB-204ENST00000455790 TYMSOSQ8TAI1 123 aa7□□□□□ -1.29
PDGFB-204ENST00000455790 TMEM126AQ9H061 195 aa7□□□□□ -1.29
PDGFB-204ENST00000455790 CHTOPQ9Y3Y2 248 aaKnown RBP7□□□□□ -1.29
PDGFB-204ENST00000455790 M0R378 163 aa6.99□□□□□ -1.29
PDGFB-204ENST00000455790 COX17Q14061 63 aa6.99□□□□□ -1.29
PDGFB-204ENST00000455790 NDUFA5Q16718 116 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms