RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 COX17Q14061 63 aa9.49□□□□□ -0.89
PTPRE-204ENST00000455661 RBM3P98179 157 aaKnown RBP9.49□□□□□ -0.89
PTPRE-204ENST00000455661 HRCT1Q6UXD1 115 aa9.49□□□□□ -0.89
PTPRE-204ENST00000455661 FAM236DA0A1B0GTK5 79 aa9.48□□□□□ -0.89
PTPRE-204ENST00000455661 FAM236CP0DP71 79 aa9.48□□□□□ -0.89
PTPRE-204ENST00000455661 A0A1B0GUV1 79 aa9.48□□□□□ -0.89
PTPRE-204ENST00000455661 C2CD3Q4AC94 2353 aa9.47□□□□□ -0.89
PTPRE-204ENST00000455661 PLA2G2AP14555 144 aa9.47□□□□□ -0.89
PTPRE-204ENST00000455661 C6orf99Q4VX62 202 aa9.47□□□□□ -0.89
PTPRE-204ENST00000455661 CELSR2Q9HCU4 2923 aa9.47□□□□□ -0.89
PTPRE-204ENST00000455661 TRAV7A0A075B6U4 112 aa9.47□□□□□ -0.89
PTPRE-204ENST00000455661 Q6ZQT0 140 aa9.46□□□□□ -0.9
PTPRE-204ENST00000455661 LAMTOR3Q9UHA4 124 aa9.46□□□□□ -0.9
PTPRE-204ENST00000455661 ZNF561-AS1K7EIQ3 104 aa9.45□□□□□ -0.9
PTPRE-204ENST00000455661 CLPSL2Q6UWE3 100 aa9.45□□□□□ -0.9
PTPRE-204ENST00000455661 LINC00575Q6W349 94 aa9.45□□□□□ -0.9
PTPRE-204ENST00000455661 LOC110117498A0A087WWA1 95 aa9.45□□□□□ -0.9
PTPRE-204ENST00000455661 CSNK1G2-AS1Q8NCQ2 148 aa9.45□□□□□ -0.9
PTPRE-204ENST00000455661 WFDC10AQ9H1F0 79 aa9.45□□□□□ -0.9
PTPRE-204ENST00000455661 GYPEP15421 78 aa9.44□□□□□ -0.9
PTPRE-204ENST00000455661 DEFB130BP0DP73 79 aa9.44□□□□□ -0.9
PTPRE-204ENST00000455661 DEFB130AP0DP74 79 aa9.44□□□□□ -0.9
PTPRE-204ENST00000455661 SERP1Q9Y6X1 66 aa9.44□□□□□ -0.9
PTPRE-204ENST00000455661 HAMPP81172 84 aa9.43□□□□□ -0.9
PTPRE-204ENST00000455661 LINC01547P58512 204 aaPredicted RBP9.43□□□□□ -0.9
PTPRE-204ENST00000455661 KIAA0087Q14695 138 aa9.42□□□□□ -0.9
PTPRE-204ENST00000455661 CD164L2Q6UWJ8 174 aa9.42□□□□□ -0.9
PTPRE-204ENST00000455661 C6orf223Q8N319 242 aa9.42□□□□□ -0.9
PTPRE-204ENST00000455661 IGHV4-28A0A0C4DH34 117 aa9.42□□□□□ -0.9
PTPRE-204ENST00000455661 H3BQ85 93 aa9.41□□□□□ -0.9
PTPRE-204ENST00000455661 H7BZZ5 65 aa9.41□□□□□ -0.9
PTPRE-204ENST00000455661 PDE6GP18545 87 aa9.41□□□□□ -0.9
PTPRE-204ENST00000455661 LINC00482Q8N8I6 264 aa9.41□□□□□ -0.9
PTPRE-204ENST00000455661 NOTCH3Q9UM47 2321 aa9.41□□□□□ -0.9
PTPRE-204ENST00000455661 Q6ZVQ6 151 aa9.4□□□□□ -0.9
PTPRE-204ENST00000455661 C9orf116Q5BN46 136 aaPredicted RBP9.4□□□□□ -0.9
PTPRE-204ENST00000455661 CSMD2Q7Z408 3487 aa9.39□□□□□ -0.91
PTPRE-204ENST00000455661 KLKP1Q107X0 134 aa9.39□□□□□ -0.91
PTPRE-204ENST00000455661 LINC00269Q8N2A0 174 aa9.39□□□□□ -0.91
PTPRE-204ENST00000455661 CHCHD10Q8WYQ3 142 aaPredicted RBP9.39□□□□□ -0.91
PTPRE-204ENST00000455661 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
PTPRE-204ENST00000455661 CR1P17927 2039 aa9.39□□□□□ -0.91
PTPRE-204ENST00000455661 WNK1Q9H4A3 2382 aa9.39□□□□□ -0.91
PTPRE-204ENST00000455661 EPM2AB3EWF7 344 aa9.38□□□□□ -0.91
PTPRE-204ENST00000455661 CXCL6P80162 114 aa9.38□□□□□ -0.91
PTPRE-204ENST00000455661 MRAPQ8TCY5 172 aa9.38□□□□□ -0.91
PTPRE-204ENST00000455661 A0A096LPF7 62 aa9.37□□□□□ -0.91
PTPRE-204ENST00000455661 TRAV10A0A0B4J240 114 aa9.37□□□□□ -0.91
PTPRE-204ENST00000455661 IGLV1-51P01701 117 aa9.37□□□□□ -0.91
PTPRE-204ENST00000455661 MUC7Q8TAX7 377 aa9.37□□□□□ -0.91
PTPRE-204ENST00000455661 PRO0255Q9UI72 69 aa9.37□□□□□ -0.91
PTPRE-204ENST00000455661 MXRA5Q9NR99 2828 aa9.37□□□□□ -0.91
PTPRE-204ENST00000455661 Q8NDZ9 215 aa9.37□□□□□ -0.91
PTPRE-204ENST00000455661 USP9YO00507 2555 aaPredicted RBP9.37□□□□□ -0.91
PTPRE-204ENST00000455661 IGLV10-54A0A075B6I4 117 aa9.36□□□□□ -0.91
PTPRE-204ENST00000455661 M0R2N4 97 aa9.36□□□□□ -0.91
PTPRE-204ENST00000455661 C9orf66Q5T8R8 295 aa9.36□□□□□ -0.91
PTPRE-204ENST00000455661 NCOR2Q9Y618 2525 aa9.36□□□□□ -0.91
PTPRE-204ENST00000455661 DNAJC9-AS1A6NH13 148 aa9.36□□□□□ -0.91
PTPRE-204ENST00000455661 ANGP03950 147 aaKnown RBP9.36□□□□□ -0.91
PTPRE-204ENST00000455661 Q6ZQY7 126 aa9.36□□□□□ -0.91
PTPRE-204ENST00000455661 LINC00612Q8N6U2 182 aa9.36□□□□□ -0.91
PTPRE-204ENST00000455661 ANKRD17O75179 2603 aaKnown RBP9.35□□□□□ -0.91
PTPRE-204ENST00000455661 REG3AQ06141 175 aa9.35□□□□□ -0.91
PTPRE-204ENST00000455661 ZNF843Q8N446 348 aa9.35□□□□□ -0.91
PTPRE-204ENST00000455661 SNURFQ9Y675 71 aa9.35□□□□□ -0.91
PTPRE-204ENST00000455661 DOPEY1Q5JWR5 2465 aa9.35□□□□□ -0.91
PTPRE-204ENST00000455661 ZANQ9Y493 2812 aa9.35□□□□□ -0.91
PTPRE-204ENST00000455661 BBC3Q96PG8 261 aaPredicted RBP9.34□□□□□ -0.91
PTPRE-204ENST00000455661 NDUFC1O43677 76 aa9.34□□□□□ -0.91
PTPRE-204ENST00000455661 RMI2Q96E14 147 aa9.34□□□□□ -0.91
PTPRE-204ENST00000455661 CHD6Q8TD26 2715 aa9.33□□□□□ -0.92
PTPRE-204ENST00000455661 F8WEM9 126 aa9.33□□□□□ -0.92
PTPRE-204ENST00000455661 IGLV6-57P01721 117 aa9.33□□□□□ -0.92
PTPRE-204ENST00000455661 MYO9AB2RTY4 2548 aa9.33□□□□□ -0.92
PTPRE-204ENST00000455661 Q8N3U1 123 aa9.33□□□□□ -0.92
PTPRE-204ENST00000455661 SMIM26A0A096LP01 95 aa9.32□□□□□ -0.92
PTPRE-204ENST00000455661 DEFB113Q30KQ7 82 aa9.32□□□□□ -0.92
PTPRE-204ENST00000455661 LINC01006Q8NI28 216 aa9.32□□□□□ -0.92
PTPRE-204ENST00000455661 ITPR1Q14643 2758 aa9.32□□□□□ -0.92
PTPRE-204ENST00000455661 SPAG11BQ08648 103 aa9.32□□□□□ -0.92
PTPRE-204ENST00000455661 UNQ6190/PRO20217Q6UXQ8 127 aa9.32□□□□□ -0.92
PTPRE-204ENST00000455661 CHD8Q9HCK8 2581 aa9.31□□□□□ -0.92
PTPRE-204ENST00000455661 SPATA3Q8NHX4 192 aa9.31□□□□□ -0.92
PTPRE-204ENST00000455661 DIRC1Q969H9 104 aa9.31□□□□□ -0.92
PTPRE-204ENST00000455661 USP9XQ93008 2570 aaPredicted RBP9.31□□□□□ -0.92
PTPRE-204ENST00000455661 C10orf25Q5T742 122 aa9.3□□□□□ -0.92
PTPRE-204ENST00000455661 PRO0628Q9UI54 55 aa9.3□□□□□ -0.92
PTPRE-204ENST00000455661 ATP5EP56381 51 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-204ENST00000455661 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.3□□□□□ -0.92
PTPRE-204ENST00000455661 A0A0J9YWU9 116 aa9.29□□□□□ -0.92
PTPRE-204ENST00000455661 IGHV4-30-4P0DP06 118 aa9.29□□□□□ -0.92
PTPRE-204ENST00000455661 TRBV7-4A0A0J9YYF1 115 aa9.28□□□□□ -0.92
PTPRE-204ENST00000455661 CYSRT1A8MQ03 144 aa9.28□□□□□ -0.92
PTPRE-204ENST00000455661 TM2D3Q9BRN9 247 aa9.28□□□□□ -0.92
PTPRE-204ENST00000455661 MIFP14174 115 aa9.27□□□□□ -0.92
PTPRE-204ENST00000455661 KRTAP10-9P60411 292 aa9.27□□□□□ -0.92
PTPRE-204ENST00000455661 LINC00336Q6ZUF6 198 aa9.27□□□□□ -0.92
PTPRE-204ENST00000455661 SCXQ7RTU7 201 aa9.27□□□□□ -0.92
PTPRE-204ENST00000455661 ESM1Q9NQ30 184 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms