RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 RNASE10Q5GAN6 216 aaKnown RBP2.42□□□□□ -2.02
SBDSP1-204ENST00000453858 LYZL1Q6UWQ5 148 aa2.42□□□□□ -2.02
SBDSP1-204ENST00000453858 SMIM15Q7Z3B0 74 aa2.42□□□□□ -2.02
SBDSP1-204ENST00000453858 CLVS1Q8IUQ0 354 aaPredicted RBP2.42□□□□□ -2.02
SBDSP1-204ENST00000453858 PRO0628Q9UI54 55 aa2.42□□□□□ -2.02
SBDSP1-204ENST00000453858 SMIM26A0A096LP01 95 aa2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 GRIFINA4D1Z8 144 aa2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 NDUFC2-KCTD14E9PQ53 114 aa2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 PSMB2P49721 201 aa2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 S100A12P80511 92 aa2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 C6orf99Q4VX62 202 aa2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 Q86TA4 180 aa2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 COMMD7Q86VX2 200 aa2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 FAM104AQ969W3 186 aa2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 SLC25A21Q9BQT8 299 aaPredicted RBP2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 KRTAP4-3Q9BYR4 195 aa2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 OTORQ9NRC9 128 aa2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 C14orf166Q9Y224 244 aaKnown RBP2.41□□□□□ -2.02
SBDSP1-204ENST00000453858 TGIF2-C20orf24A0A0A6YYL0 155 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 IGHV6-1A0A0B4J1U7 121 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 FABP5P3A8MUU1 101 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 B4DEV8 164 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 C8orf87E5RJ46 101 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 NDUFA1O15239 70 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 TMBIM6P55061 237 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 RAB5BP61020 215 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 GNG5P63218 68 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 PRLHP81277 87 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 IFITM3Q01628 133 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 PMVKQ15126 192 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 SCGB2B2Q4G0G5 96 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 UBE2NLQ5JXB2 153 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 C1orf195Q5TG92 126 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 C5orf38Q86SI9 138 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 OR10D4PQ8NGN7 298 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 MARVELD1Q9BSK0 173 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 CYTL1Q9NRR1 136 aa2.4□□□□□ -2.03
SBDSP1-204ENST00000453858 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.39□□□□□ -2.03
SBDSP1-204ENST00000453858 IGKV2-29A2NJV5 120 aaPredicted RBP2.39□□□□□ -2.03
SBDSP1-204ENST00000453858 DISC1C4P0D8 188 aa2.39□□□□□ -2.03
SBDSP1-204ENST00000453858 LINC00614P0C842 121 aa2.39□□□□□ -2.03
SBDSP1-204ENST00000453858 TPT1P13693 172 aaKnown RBP2.39□□□□□ -2.03
SBDSP1-204ENST00000453858 SLC51BQ86UW2 128 aa2.39□□□□□ -2.03
SBDSP1-204ENST00000453858 Q8N9L7 120 aa2.39□□□□□ -2.03
SBDSP1-204ENST00000453858 FMC1Q96HJ9 113 aa2.39□□□□□ -2.03
SBDSP1-204ENST00000453858 GNB1LQ9BYB4 327 aa2.39□□□□□ -2.03
SBDSP1-204ENST00000453858 CDC42SE2Q9NRR3 84 aa2.39□□□□□ -2.03
SBDSP1-204ENST00000453858 LSM5Q9Y4Y9 91 aaKnown RBP2.39□□□□□ -2.03
SBDSP1-204ENST00000453858 C1orf196B1AJZ1 125 aa2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 ZNF25P17030 456 aaPredicted RBP2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 H2BFSP57053 126 aa2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 RPL23P62829 140 aaKnown RBP2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 IFITM2Q01629 132 aa2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 IAH1Q2TAA2 248 aaPredicted RBP2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 ORMDL2Q53FV1 153 aa2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 AMMECR1LQ6DCA0 310 aa2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 SSBP3-AS1Q7Z2R9 100 aa2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 SNX29P2Q8IUI4 249 aa2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 C8orf59Q8N0T1 100 aaPredicted RBP2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 OR10AG1Q8NH19 301 aa2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 NDFIP1Q9BT67 221 aa2.38□□□□□ -2.03
SBDSP1-204ENST00000453858 LOC389332A0A1B0GUA5 103 aa2.37□□□□□ -2.03
SBDSP1-204ENST00000453858 SSSCA1O60232 199 aa2.37□□□□□ -2.03
SBDSP1-204ENST00000453858 TAS2R30P59541 319 aa2.37□□□□□ -2.03
SBDSP1-204ENST00000453858 TRIQKQ629K1 86 aa2.37□□□□□ -2.03
SBDSP1-204ENST00000453858 KRTAP8-1Q8IUC2 63 aa2.37□□□□□ -2.03
SBDSP1-204ENST00000453858 TMEM229BQ8NBD8 167 aa2.37□□□□□ -2.03
SBDSP1-204ENST00000453858 CMTM2Q8TAZ6 248 aa2.37□□□□□ -2.03
SBDSP1-204ENST00000453858 XAGE1AQ9HD64 81 aa2.37□□□□□ -2.03
SBDSP1-204ENST00000453858 BATF3Q9NR55 127 aa2.37□□□□□ -2.03
SBDSP1-204ENST00000453858 RBM12B-AS1Q9P1G2 102 aa2.37□□□□□ -2.03
SBDSP1-204ENST00000453858 PRO0461Q9UI25 63 aa2.37□□□□□ -2.03
SBDSP1-204ENST00000453858 TRBV30A0A0K0K1B3 111 aa2.36□□□□□ -2.03
SBDSP1-204ENST00000453858 A0A1B0GV72 72 aa2.36□□□□□ -2.03
SBDSP1-204ENST00000453858 GIPP09681 153 aaPredicted RBP2.36□□□□□ -2.03
SBDSP1-204ENST00000453858 MT4P47944 62 aa2.36□□□□□ -2.03
SBDSP1-204ENST00000453858 GNGT1P63211 74 aa2.36□□□□□ -2.03
SBDSP1-204ENST00000453858 FLI1Q01543 452 aaPredicted RBP2.36□□□□□ -2.03
SBDSP1-204ENST00000453858 LINC00483Q53H64 154 aa2.36□□□□□ -2.03
SBDSP1-204ENST00000453858 SCGB1D4Q6XE38 83 aa2.36□□□□□ -2.03
SBDSP1-204ENST00000453858 CAMK2N1Q7Z7J9 78 aa2.36□□□□□ -2.03
SBDSP1-204ENST00000453858 BTF3L4Q96K17 158 aa2.36□□□□□ -2.03
SBDSP1-204ENST00000453858 SIGMAR1Q99720 223 aa2.36□□□□□ -2.03
SBDSP1-204ENST00000453858 C7orf66A4D0T2 115 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 ZNF727A8MUV8 499 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 TMEM250H0YL14 139 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 OR7C2O60412 319 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 DDTP30046 118 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 UBE2L3P68036 154 aaKnown RBP2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 ZFP1Q6P2D0 407 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 RASL11AQ6T310 242 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 ORAOV1Q8WV07 137 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 DEDD2Q8WXF8 326 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 TIMM17AQ99595 171 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 NIT2Q9NQR4 276 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 SCN3BQ9NY72 215 aa2.35□□□□□ -2.03
SBDSP1-204ENST00000453858 PIGBOS1A0A0B4J2F0 54 aa2.34□□□□□ -2.03
SBDSP1-204ENST00000453858 MUC21A0A140T8X8 626 aa2.34□□□□□ -2.03
SBDSP1-204ENST00000453858 ARL14EPLP0DKL9 152 aa2.34□□□□□ -2.03
SBDSP1-204ENST00000453858 MOBPQ13875 183 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms