RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 FAM104AQ969W3 186 aa8.04□□□□□ -1.12
CHD3-206ENST00000452447 PACRGQ96M98 296 aaPredicted RBP8.04□□□□□ -1.12
CHD3-206ENST00000452447 LOC389332A0A1B0GUA5 103 aa8.03□□□□□ -1.12
CHD3-206ENST00000452447 PRSS47A8MTI9 375 aa8.03□□□□□ -1.12
CHD3-206ENST00000452447 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.03□□□□□ -1.12
CHD3-206ENST00000452447 C21orf62-AS1Q17RA5 79 aa8.03□□□□□ -1.12
CHD3-206ENST00000452447 Q6ZRP5 223 aa8.03□□□□□ -1.12
CHD3-206ENST00000452447 BAGE3Q86Y29 109 aa8.03□□□□□ -1.12
CHD3-206ENST00000452447 PRO1933Q9H354 126 aa8.03□□□□□ -1.12
CHD3-206ENST00000452447 LINC01549A6NIU2 74 aa8.02□□□□□ -1.13
CHD3-206ENST00000452447 F8WDY8 70 aa8.02□□□□□ -1.13
CHD3-206ENST00000452447 RNF151Q2KHN1 245 aa8.02□□□□□ -1.13
CHD3-206ENST00000452447 FA2HQ7L5A8 372 aa8.02□□□□□ -1.13
CHD3-206ENST00000452447 CHTOPQ9Y3Y2 248 aaKnown RBP8.02□□□□□ -1.13
CHD3-206ENST00000452447 PYGO1Q9Y3Y4 419 aa8.02□□□□□ -1.13
CHD3-206ENST00000452447 A0A0J9YXV3 536 aa8.01□□□□□ -1.13
CHD3-206ENST00000452447 NDUFA1O15239 70 aa8.01□□□□□ -1.13
CHD3-206ENST00000452447 SPINK6Q6UWN8 80 aa8.01□□□□□ -1.13
CHD3-206ENST00000452447 C18orf32Q8TCD1 76 aa8.01□□□□□ -1.13
CHD3-206ENST00000452447 TMEM141Q96I45 108 aa8.01□□□□□ -1.13
CHD3-206ENST00000452447 HIST1H2BLQ99880 126 aa8.01□□□□□ -1.13
CHD3-206ENST00000452447 MRPL35Q9NZE8 188 aaKnown RBP8.01□□□□□ -1.13
CHD3-206ENST00000452447 A0A1W2PNN7 141 aa8.01□□□□□ -1.13
CHD3-206ENST00000452447 FABP4P15090 132 aa8.01□□□□□ -1.13
CHD3-206ENST00000452447 ORMDL2Q53FV1 153 aa8.01□□□□□ -1.13
CHD3-206ENST00000452447 C9orf116Q5BN46 136 aaPredicted RBP8.01□□□□□ -1.13
CHD3-206ENST00000452447 Q8N8P6 123 aa8.01□□□□□ -1.13
CHD3-206ENST00000452447 CHCHD1Q96BP2 118 aaKnown RBP8.01□□□□□ -1.13
CHD3-206ENST00000452447 SNHG12Q9BXW3 62 aa8.01□□□□□ -1.13
CHD3-206ENST00000452447 IGLV4-3A0A075B6K6 122 aa8□□□□□ -1.13
CHD3-206ENST00000452447 TMEM238LA0A1B0GVL6 79 aa8□□□□□ -1.13
CHD3-206ENST00000452447 REG3GQ6UW15 175 aa8□□□□□ -1.13
CHD3-206ENST00000452447 TEX43Q6ZNM6 134 aa8□□□□□ -1.13
CHD3-206ENST00000452447 LINC01600Q96MT4 127 aa8□□□□□ -1.13
CHD3-206ENST00000452447 CYSLTR1Q9Y271 337 aa8□□□□□ -1.13
CHD3-206ENST00000452447 A0A087WZ39 114 aa7.99□□□□□ -1.13
CHD3-206ENST00000452447 HSBP1O75506 76 aa7.99□□□□□ -1.13
CHD3-206ENST00000452447 Q6ZN92 141 aa7.99□□□□□ -1.13
CHD3-206ENST00000452447 LINC00242Q5T6M2 205 aa7.98□□□□□ -1.13
CHD3-206ENST00000452447 C2orf66Q6UXQ4 117 aa7.98□□□□□ -1.13
CHD3-206ENST00000452447 UNQ6190/PRO20217Q6UXQ8 127 aa7.98□□□□□ -1.13
CHD3-206ENST00000452447 C10orf25Q5T742 122 aa7.97□□□□□ -1.13
CHD3-206ENST00000452447 SRSF9Q13242 221 aaKnown RBP eCLIP7.97□□□□□ -1.13
CHD3-206ENST00000452447 VCX2Q9H322 139 aa7.97□□□□□ -1.13
CHD3-206ENST00000452447 C6orf48Q9UBA6 75 aa7.97□□□□□ -1.13
CHD3-206ENST00000452447 TLX1NBP0CAT3 122 aa7.96□□□□□ -1.14
CHD3-206ENST00000452447 UBE2D1P51668 147 aa7.96□□□□□ -1.14
CHD3-206ENST00000452447 PHF5AQ7RTV0 110 aaKnown RBP7.96□□□□□ -1.14
CHD3-206ENST00000452447 PSORS1C2Q9UIG4 136 aa7.96□□□□□ -1.14
CHD3-206ENST00000452447 LINC01546A6NGU7 62 aa7.95□□□□□ -1.14
CHD3-206ENST00000452447 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
CHD3-206ENST00000452447 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
CHD3-206ENST00000452447 TRBV30A0A0K0K1B3 111 aa7.94□□□□□ -1.14
CHD3-206ENST00000452447 HSBP1L1C9JCN9 74 aa7.94□□□□□ -1.14
CHD3-206ENST00000452447 SERF1AO75920 110 aa7.94□□□□□ -1.14
CHD3-206ENST00000452447 HBDP02042 147 aa7.94□□□□□ -1.14
CHD3-206ENST00000452447 NPSP0C0P6 89 aa7.94□□□□□ -1.14
CHD3-206ENST00000452447 KIAA0087Q14695 138 aa7.94□□□□□ -1.14
CHD3-206ENST00000452447 C1orf137Q5JT78 98 aa7.94□□□□□ -1.14
CHD3-206ENST00000452447 ZC2HC1BQ5TFG8 222 aa7.94□□□□□ -1.14
CHD3-206ENST00000452447 LINC01561Q8N1V8 128 aa7.94□□□□□ -1.14
CHD3-206ENST00000452447 AMELXQ99217 191 aa7.94□□□□□ -1.14
CHD3-206ENST00000452447 PRSS2P07478 247 aa7.93□□□□□ -1.14
CHD3-206ENST00000452447 PAPPA-AS1Q5QFB9 102 aa7.93□□□□□ -1.14
CHD3-206ENST00000452447 COL5A1-AS1Q5SY13 56 aa7.93□□□□□ -1.14
CHD3-206ENST00000452447 FAM168BA1KXE4 195 aa7.93□□□□□ -1.14
CHD3-206ENST00000452447 IGIPA6NJ69 53 aa7.93□□□□□ -1.14
CHD3-206ENST00000452447 C2orf82Q6UX34 121 aa7.93□□□□□ -1.14
CHD3-206ENST00000452447 FAM19A5Q7Z5A7 132 aaPredicted RBP7.93□□□□□ -1.14
CHD3-206ENST00000452447 NDUFC2-KCTD14E9PQ53 114 aa7.92□□□□□ -1.14
CHD3-206ENST00000452447 SEC11AP67812 179 aa7.92□□□□□ -1.14
CHD3-206ENST00000452447 LINC00173Q6ZV60 143 aa7.92□□□□□ -1.14
CHD3-206ENST00000452447 MIEN1Q9BRT3 115 aa7.92□□□□□ -1.14
CHD3-206ENST00000452447 TOMM7Q9P0U1 55 aa7.92□□□□□ -1.14
CHD3-206ENST00000452447 HSPB8Q9UJY1 196 aa7.92□□□□□ -1.14
CHD3-206ENST00000452447 ATP5LO75964 103 aa7.91□□□□□ -1.14
CHD3-206ENST00000452447 KRTAP10-8P60410 259 aa7.91□□□□□ -1.14
CHD3-206ENST00000452447 CKS1BP61024 79 aa7.91□□□□□ -1.14
CHD3-206ENST00000452447 C6orf226Q5I0X4 101 aa7.91□□□□□ -1.14
CHD3-206ENST00000452447 LRP2P98164 4655 aa7.91□□□□□ -1.14
CHD3-206ENST00000452447 LEPROTL1O95214 131 aa7.9□□□□□ -1.14
CHD3-206ENST00000452447 HERVK_113P63121 156 aa7.9□□□□□ -1.14
CHD3-206ENST00000452447 PDZD11Q5EBL8 140 aa7.9□□□□□ -1.14
CHD3-206ENST00000452447 FAM19A3Q7Z5A8 133 aa7.9□□□□□ -1.14
CHD3-206ENST00000452447 TOMM6Q96B49 74 aa7.9□□□□□ -1.14
CHD3-206ENST00000452447 TIMM17AQ99595 171 aa7.9□□□□□ -1.14
CHD3-206ENST00000452447 GEMIN7Q9H840 131 aaKnown RBP7.9□□□□□ -1.14
CHD3-206ENST00000452447 UBE2BP63146 152 aa7.89□□□□□ -1.15
CHD3-206ENST00000452447 C20orf202A1L168 122 aa7.88□□□□□ -1.15
CHD3-206ENST00000452447 M0QXV9 152 aa7.88□□□□□ -1.15
CHD3-206ENST00000452447 IGLV7-43P04211 117 aa7.88□□□□□ -1.15
CHD3-206ENST00000452447 ODF1Q14990 250 aa7.88□□□□□ -1.15
CHD3-206ENST00000452447 ERASQ7Z444 233 aa7.88□□□□□ -1.15
CHD3-206ENST00000452447 Q8IZM0 81 aa7.88□□□□□ -1.15
CHD3-206ENST00000452447 DIRC1Q969H9 104 aa7.88□□□□□ -1.15
CHD3-206ENST00000452447 URB1-AS1Q96HZ7 61 aa7.88□□□□□ -1.15
CHD3-206ENST00000452447 SCGB3A1Q96QR1 104 aa7.88□□□□□ -1.15
CHD3-206ENST00000452447 CDKN2A-AS1Q9UH64 79 aa7.88□□□□□ -1.15
CHD3-206ENST00000452447 FAM19A2Q8N3H0 131 aa7.87□□□□□ -1.15
CHD3-206ENST00000452447 MAP1LC3CQ9BXW4 147 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms