RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 PLNP26678 52 aa4.91□□□□□ -1.62
AC004540.1-206ENST00000448056 FUSP35637 526 aaKnown RBP eCLIP4.91□□□□□ -1.62
AC004540.1-206ENST00000448056 KIAA0087Q14695 138 aa4.91□□□□□ -1.62
AC004540.1-206ENST00000448056 TMEM170BQ5T4T1 132 aa4.91□□□□□ -1.62
AC004540.1-206ENST00000448056 LINC01545Q5VT33 79 aa4.91□□□□□ -1.62
AC004540.1-206ENST00000448056 OR10D4PQ8NGN7 298 aa4.91□□□□□ -1.62
AC004540.1-206ENST00000448056 NTN5Q8WTR8 489 aaPredicted RBP4.91□□□□□ -1.62
AC004540.1-206ENST00000448056 ORAOV1Q8WV07 137 aa4.91□□□□□ -1.62
AC004540.1-206ENST00000448056 LINC00526Q96FQ7 95 aa4.91□□□□□ -1.62
AC004540.1-206ENST00000448056 PMCHL2Q9BQD1 86 aa4.91□□□□□ -1.62
AC004540.1-206ENST00000448056 IGLV5-52A0A0A0MRZ9 124 aa4.9□□□□□ -1.63
AC004540.1-206ENST00000448056 TMEM223A0PJW6 202 aa4.9□□□□□ -1.63
AC004540.1-206ENST00000448056 SMIM1B2RUZ4 78 aa4.9□□□□□ -1.63
AC004540.1-206ENST00000448056 IGKCP01834 107 aa4.9□□□□□ -1.63
AC004540.1-206ENST00000448056 SPINK8P0C7L1 97 aa4.9□□□□□ -1.63
AC004540.1-206ENST00000448056 CNBPP62633 177 aaKnown RBP4.9□□□□□ -1.63
AC004540.1-206ENST00000448056 SPAG11BQ08648 103 aa4.9□□□□□ -1.63
AC004540.1-206ENST00000448056 C6orf226Q5I0X4 101 aa4.9□□□□□ -1.63
AC004540.1-206ENST00000448056 C2orf48Q96LS8 159 aa4.9□□□□□ -1.63
AC004540.1-206ENST00000448056 DNAH11Q96DT5 4516 aa4.9□□□□□ -1.63
AC004540.1-206ENST00000448056 IGLV5-39A0A0G2JS06 123 aa4.89□□□□□ -1.63
AC004540.1-206ENST00000448056 F8WDY8 70 aa4.89□□□□□ -1.63
AC004540.1-206ENST00000448056 PRSS2P07478 247 aa4.89□□□□□ -1.63
AC004540.1-206ENST00000448056 LCE4AQ5TA78 99 aa4.89□□□□□ -1.63
AC004540.1-206ENST00000448056 Q8IZM0 81 aa4.89□□□□□ -1.63
AC004540.1-206ENST00000448056 TOMM7Q9P0U1 55 aa4.89□□□□□ -1.63
AC004540.1-206ENST00000448056 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.88□□□□□ -1.63
AC004540.1-206ENST00000448056 C20orf202A1L168 122 aa4.88□□□□□ -1.63
AC004540.1-206ENST00000448056 KRTAP9-7A8MTY7 169 aa4.88□□□□□ -1.63
AC004540.1-206ENST00000448056 GCSHP23434 173 aa4.88□□□□□ -1.63
AC004540.1-206ENST00000448056 SYCNQ0VAF6 134 aa4.88□□□□□ -1.63
AC004540.1-206ENST00000448056 UNQ6190/PRO20217Q6UXQ8 127 aa4.88□□□□□ -1.63
AC004540.1-206ENST00000448056 C9orf163Q8N9P6 203 aa4.88□□□□□ -1.63
AC004540.1-206ENST00000448056 COX7B2Q8TF08 81 aa4.88□□□□□ -1.63
AC004540.1-206ENST00000448056 CAMK2N2Q96S95 79 aa4.88□□□□□ -1.63
AC004540.1-206ENST00000448056 HECTD4Q9Y4D8 3996 aa4.88□□□□□ -1.63
AC004540.1-206ENST00000448056 C16orf90A8MZG2 172 aa4.87□□□□□ -1.63
AC004540.1-206ENST00000448056 NDUFA1O15239 70 aa4.87□□□□□ -1.63
AC004540.1-206ENST00000448056 CKS1BP61024 79 aa4.87□□□□□ -1.63
AC004540.1-206ENST00000448056 LINC01620Q4KN68 170 aa4.87□□□□□ -1.63
AC004540.1-206ENST00000448056 C10orf25Q5T742 122 aa4.87□□□□□ -1.63
AC004540.1-206ENST00000448056 C2orf82Q6UX34 121 aa4.87□□□□□ -1.63
AC004540.1-206ENST00000448056 SDIM1Q6ZPB5 146 aa4.87□□□□□ -1.63
AC004540.1-206ENST00000448056 Q6ZRU5 148 aa4.87□□□□□ -1.63
AC004540.1-206ENST00000448056 CARD19Q96LW7 228 aa4.87□□□□□ -1.63
AC004540.1-206ENST00000448056 BIRC6Q9NR09 4857 aa4.87□□□□□ -1.63
AC004540.1-206ENST00000448056 AKR1D1P51857 326 aa4.86□□□□□ -1.63
AC004540.1-206ENST00000448056 KRTAP10-1P60331 282 aa4.86□□□□□ -1.63
AC004540.1-206ENST00000448056 STPG4Q8N801 248 aa4.86□□□□□ -1.63
AC004540.1-206ENST00000448056 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
AC004540.1-206ENST00000448056 PKHD1P08F94 4074 aa4.86□□□□□ -1.63
AC004540.1-206ENST00000448056 TRBV30A0A0K0K1B3 111 aa4.85□□□□□ -1.63
AC004540.1-206ENST00000448056 LEPROTO15243 131 aa4.85□□□□□ -1.63
AC004540.1-206ENST00000448056 SCGB1D1O95968 90 aa4.85□□□□□ -1.63
AC004540.1-206ENST00000448056 CXCL5P42830 114 aa4.85□□□□□ -1.63
AC004540.1-206ENST00000448056 HERVK_113P61574 105 aa4.85□□□□□ -1.63
AC004540.1-206ENST00000448056 ATOH7Q8N100 152 aa4.85□□□□□ -1.63
AC004540.1-206ENST00000448056 PLEKHB2Q96CS7 222 aa4.85□□□□□ -1.63
AC004540.1-206ENST00000448056 C6orf48Q9UBA6 75 aa4.85□□□□□ -1.63
AC004540.1-206ENST00000448056 E9PLD3 99 aa4.84□□□□□ -1.63
AC004540.1-206ENST00000448056 C9orf116Q5BN46 136 aaPredicted RBP4.84□□□□□ -1.63
AC004540.1-206ENST00000448056 ZNF625Q96I27 306 aaPredicted RBP4.84□□□□□ -1.63
AC004540.1-206ENST00000448056 FAM30AQ9NZY2 134 aa4.84□□□□□ -1.63
AC004540.1-206ENST00000448056 LOC107984640A0A0U1RRK4 108 aa4.83□□□□□ -1.64
AC004540.1-206ENST00000448056 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
AC004540.1-206ENST00000448056 B5MCH6 92 aa4.83□□□□□ -1.64
AC004540.1-206ENST00000448056 J3QQQ9 107 aa4.83□□□□□ -1.64
AC004540.1-206ENST00000448056 TLX1NBP0CAT3 122 aa4.83□□□□□ -1.64
AC004540.1-206ENST00000448056 TSPEAR-AS2P59090 65 aa4.83□□□□□ -1.64
AC004540.1-206ENST00000448056 JOSD1Q15040 202 aaPredicted RBP4.83□□□□□ -1.64
AC004540.1-206ENST00000448056 SFTA2Q6UW10 78 aa4.83□□□□□ -1.64
AC004540.1-206ENST00000448056 NDUFA12Q9UI09 145 aa4.83□□□□□ -1.64
AC004540.1-206ENST00000448056 DNAH5Q8TE73 4624 aa4.83□□□□□ -1.64
AC004540.1-206ENST00000448056 IGKV2D-26A0A0A0MRZ7 120 aa4.82□□□□□ -1.64
AC004540.1-206ENST00000448056 MYMXA0A1B0GTQ4 84 aa4.82□□□□□ -1.64
AC004540.1-206ENST00000448056 LGALS3P17931 250 aaKnown RBP4.82□□□□□ -1.64
AC004540.1-206ENST00000448056 MAJINQ3KP22 176 aa4.82□□□□□ -1.64
AC004540.1-206ENST00000448056 PKIGQ9Y2B9 76 aa4.82□□□□□ -1.64
AC004540.1-206ENST00000448056 A0A096LNI7 61 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 HSBP1L1C9JCN9 74 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 NDUFC2-KCTD14E9PQ53 114 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 PANO1I0J062 215 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 NMUP48645 174 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 PTTG1IPP53801 180 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 HERV-K104P63124 156 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 GAGE2BQ13066 116 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 COX17Q14061 63 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 Q6ZRP5 223 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 Q6ZSA8 131 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 DPH3Q96FX2 82 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 LINC00474Q9P2X8 69 aa4.81□□□□□ -1.64
AC004540.1-206ENST00000448056 DYNC1H1Q14204 4646 aaKnown RBP4.8□□□□□ -1.64
AC004540.1-206ENST00000448056 IGKV2-24A0A0C4DH68 120 aa4.8□□□□□ -1.64
AC004540.1-206ENST00000448056 CHTF8P0CG12 524 aa4.8□□□□□ -1.64
AC004540.1-206ENST00000448056 PFN2P35080 140 aa4.8□□□□□ -1.64
AC004540.1-206ENST00000448056 RPL18AQ02543 176 aaKnown RBP4.8□□□□□ -1.64
AC004540.1-206ENST00000448056 CIRBPQ14011 172 aaKnown RBP4.8□□□□□ -1.64
AC004540.1-206ENST00000448056 GAGE2EQ4V326 116 aa4.8□□□□□ -1.64
AC004540.1-206ENST00000448056 GAGE2DQ9UEU5 116 aa4.8□□□□□ -1.64
AC004540.1-206ENST00000448056 ERG28Q9UKR5 140 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms