RNA–Protein interactions for RNA: ENST00000447419.6

PTX4-203, Transcript of pentraxin 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTX4, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-203ENST00000447419 SMIM1B2RUZ4 78 aa12.93□□□□□ -0.34
PTX4-203ENST00000447419 HSBP1O75506 76 aa12.92□□□□□ -0.34
PTX4-203ENST00000447419 SERF1AO75920 110 aa12.92□□□□□ -0.34
PTX4-203ENST00000447419 ATP5LO75964 103 aa12.92□□□□□ -0.34
PTX4-203ENST00000447419 LINC00310P59036 64 aa12.92□□□□□ -0.34
PTX4-203ENST00000447419 CKS1BP61024 79 aa12.92□□□□□ -0.34
PTX4-203ENST00000447419 GAGE2EQ4V326 116 aa12.92□□□□□ -0.34
PTX4-203ENST00000447419 GAGE2DQ9UEU5 116 aa12.92□□□□□ -0.34
PTX4-203ENST00000447419 A0A1W2PNN7 141 aa12.91□□□□□ -0.34
PTX4-203ENST00000447419 Q6ZRP5 223 aa12.91□□□□□ -0.34
PTX4-203ENST00000447419 LINC00474Q9P2X8 69 aa12.91□□□□□ -0.34
PTX4-203ENST00000447419 PKIGQ9Y2B9 76 aa12.91□□□□□ -0.34
PTX4-203ENST00000447419 IGLV5-45A0A087WSX0 123 aa12.9□□□□□ -0.34
PTX4-203ENST00000447419 NUPR1O60356 82 aa12.9□□□□□ -0.34
PTX4-203ENST00000447419 RNF151Q2KHN1 245 aa12.9□□□□□ -0.34
PTX4-203ENST00000447419 F8WDY8 70 aa12.89□□□□□ -0.35
PTX4-203ENST00000447419 IGLC3P0DOY3 106 aa12.89□□□□□ -0.35
PTX4-203ENST00000447419 Q8IZM0 81 aa12.89□□□□□ -0.35
PTX4-203ENST00000447419 H0Y8G0 127 aa12.88□□□□□ -0.35
PTX4-203ENST00000447419 IFI27L1Q96BM0 104 aa12.88□□□□□ -0.35
PTX4-203ENST00000447419 MYCBP2O75592 4640 aa12.87□□□□□ -0.35
PTX4-203ENST00000447419 FAM168BA1KXE4 195 aa12.87□□□□□ -0.35
PTX4-203ENST00000447419 ZNF22P17026 224 aaPredicted RBP12.87□□□□□ -0.35
PTX4-203ENST00000447419 HNRNPA3P51991 378 aaKnown RBP12.87□□□□□ -0.35
PTX4-203ENST00000447419 COX7B2Q8TF08 81 aa12.87□□□□□ -0.35
PTX4-203ENST00000447419 TRBV30A0A0K0K1B3 111 aa12.86□□□□□ -0.35
PTX4-203ENST00000447419 C11orf86A6NJI1 115 aa12.86□□□□□ -0.35
PTX4-203ENST00000447419 CHTOPQ9Y3Y2 248 aaKnown RBP12.86□□□□□ -0.35
PTX4-203ENST00000447419 C7orf33Q8WU49 177 aa12.85□□□□□ -0.35
PTX4-203ENST00000447419 H3BRM9 83 aa12.84□□□□□ -0.35
PTX4-203ENST00000447419 TMEM170BQ5T4T1 132 aa12.84□□□□□ -0.35
PTX4-203ENST00000447419 FLG2Q5D862 2391 aaPredicted RBP12.84□□□□□ -0.35
PTX4-203ENST00000447419 FABP4P15090 132 aa12.83□□□□□ -0.35
PTX4-203ENST00000447419 F8VRH5 84 aa12.83□□□□□ -0.36
PTX4-203ENST00000447419 TLX1NBP0CAT3 122 aa12.83□□□□□ -0.36
PTX4-203ENST00000447419 FAM19A5Q7Z5A7 132 aaPredicted RBP12.83□□□□□ -0.36
PTX4-203ENST00000447419 NDUFC2-KCTD14E9PQ53 114 aa12.82□□□□□ -0.36
PTX4-203ENST00000447419 PHF5AQ7RTV0 110 aaKnown RBP12.82□□□□□ -0.36
PTX4-203ENST00000447419 LEPROTL1O95214 131 aa12.81□□□□□ -0.36
PTX4-203ENST00000447419 HIST1H2BKO60814 126 aa12.8□□□□□ -0.36
PTX4-203ENST00000447419 HIST1H2BJP06899 126 aa12.8□□□□□ -0.36
PTX4-203ENST00000447419 HIST1H2BOP23527 126 aa12.8□□□□□ -0.36
PTX4-203ENST00000447419 HIST1H2BBP33778 126 aa12.8□□□□□ -0.36
PTX4-203ENST00000447419 HIST1H2BDP58876 126 aa12.8□□□□□ -0.36
PTX4-203ENST00000447419 HIST1H2BCP62807 126 aa12.8□□□□□ -0.36
PTX4-203ENST00000447419 HIST2H2BEQ16778 126 aa12.8□□□□□ -0.36
PTX4-203ENST00000447419 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.8□□□□□ -0.36
PTX4-203ENST00000447419 C9orf129Q5T035 196 aaKnown RBP12.8□□□□□ -0.36
PTX4-203ENST00000447419 HIST1H2BHQ93079 126 aa12.8□□□□□ -0.36
PTX4-203ENST00000447419 HIST1H2BNQ99877 126 aa12.8□□□□□ -0.36
PTX4-203ENST00000447419 HIST1H2BMQ99879 126 aa12.8□□□□□ -0.36
PTX4-203ENST00000447419 XAGE1AQ9HD64 81 aa12.8□□□□□ -0.36
PTX4-203ENST00000447419 TRAV12-1A0A0B4J245 112 aa12.78□□□□□ -0.36
PTX4-203ENST00000447419 IGLV5-39A0A0G2JS06 123 aa12.78□□□□□ -0.36
PTX4-203ENST00000447419 CXCL5P42830 114 aa12.78□□□□□ -0.36
PTX4-203ENST00000447419 KRTAP7-1Q8IUC3 87 aa12.78□□□□□ -0.36
PTX4-203ENST00000447419 PRR3P79522 188 aaKnown RBP12.77□□□□□ -0.37
PTX4-203ENST00000447419 ZNF625Q96I27 306 aaPredicted RBP12.76□□□□□ -0.37
PTX4-203ENST00000447419 PMCHL2Q9BQD1 86 aa12.76□□□□□ -0.37
PTX4-203ENST00000447419 ODF1Q14990 250 aa12.74□□□□□ -0.37
PTX4-203ENST00000447419 SERTAD4-AS1Q5TG53 156 aa12.73□□□□□ -0.37
PTX4-203ENST00000447419 HSPB8Q9UJY1 196 aa12.73□□□□□ -0.37
PTX4-203ENST00000447419 TMEM223A0PJW6 202 aa12.72□□□□□ -0.37
PTX4-203ENST00000447419 PFN2P35080 140 aa12.72□□□□□ -0.37
PTX4-203ENST00000447419 KRTAP11-1Q8IUC1 163 aa12.72□□□□□ -0.37
PTX4-203ENST00000447419 M0QXV9 152 aa12.72□□□□□ -0.37
PTX4-203ENST00000447419 LRP1Q07954 4544 aaKnown RBP12.72□□□□□ -0.37
PTX4-203ENST00000447419 PKHD1L1Q86WI1 4243 aa12.71□□□□□ -0.38
PTX4-203ENST00000447419 PSORS1C2Q9UIG4 136 aa12.7□□□□□ -0.38
PTX4-203ENST00000447419 J3QL48 77 aa12.68□□□□□ -0.38
PTX4-203ENST00000447419 UBE2BP63146 152 aa12.67□□□□□ -0.38
PTX4-203ENST00000447419 C1orf137Q5JT78 98 aa12.67□□□□□ -0.38
PTX4-203ENST00000447419 ERG28Q9UKR5 140 aa12.67□□□□□ -0.38
PTX4-203ENST00000447419 A0A0U1RRA0 63 aa12.66□□□□□ -0.38
PTX4-203ENST00000447419 MAP1LC3CQ9BXW4 147 aa12.66□□□□□ -0.38
PTX4-203ENST00000447419 C22orf24Q9Y442 160 aa12.65□□□□□ -0.38
PTX4-203ENST00000447419 HERC1Q15751 4861 aa12.65□□□□□ -0.38
PTX4-203ENST00000447419 FAT3Q8TDW7 4589 aa12.64□□□□□ -0.39
PTX4-203ENST00000447419 DPM2O94777 84 aa12.63□□□□□ -0.39
PTX4-203ENST00000447419 KRTAP29-1A8MX34 341 aaPredicted RBP12.62□□□□□ -0.39
PTX4-203ENST00000447419 PLNP26678 52 aa12.62□□□□□ -0.39
PTX4-203ENST00000447419 TSPEAR-AS2P59090 65 aa12.62□□□□□ -0.39
PTX4-203ENST00000447419 IGKCP01834 107 aa12.62□□□□□ -0.39
PTX4-203ENST00000447419 TMA7Q9Y2S6 64 aaKnown RBP12.62□□□□□ -0.39
PTX4-203ENST00000447419 GAGE10A6NGK3 116 aa12.61□□□□□ -0.39
PTX4-203ENST00000447419 SND1-IT1Q9HBX3 110 aa12.61□□□□□ -0.39
PTX4-203ENST00000447419 DMBT1Q9UGM3 2413 aaPredicted RBP12.61□□□□□ -0.39
PTX4-203ENST00000447419 SYS1-DBNDD2H3BUS1 97 aa12.6□□□□□ -0.39
PTX4-203ENST00000447419 LINC00158P58513 81 aa12.6□□□□□ -0.39
PTX4-203ENST00000447419 RPL37AP8A6NKH3 93 aa12.58□□□□□ -0.4
PTX4-203ENST00000447419 NDUFA12Q9UI09 145 aa12.58□□□□□ -0.4
PTX4-203ENST00000447419 SMIM13P0DJ93 91 aa12.57□□□□□ -0.4
PTX4-203ENST00000447419 SRSF9Q13242 221 aaKnown RBP eCLIP12.57□□□□□ -0.4
PTX4-203ENST00000447419 MRPL55Q7Z7F7 128 aaKnown RBP12.57□□□□□ -0.4
PTX4-203ENST00000447419 MEIG1Q5JSS6 88 aa12.57□□□□□ -0.4
PTX4-203ENST00000447419 COA6Q5JTJ3 125 aaKnown RBP12.57□□□□□ -0.4
PTX4-203ENST00000447419 LEPROTO15243 131 aa12.56□□□□□ -0.4
PTX4-203ENST00000447419 OXTP01178 125 aa12.56□□□□□ -0.4
PTX4-203ENST00000447419 KRTDAPP60985 99 aa12.56□□□□□ -0.4
PTX4-203ENST00000447419 COX17Q14061 63 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms