RNA–Protein interactions for RNA: ENST00000443528.5

ACTB-206, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 569 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-206ENST00000443528 ATP5LO75964 103 aa9.87□□□□□ -0.83
ACTB-206ENST00000443528 PRSS2P07478 247 aa9.87□□□□□ -0.83
ACTB-206ENST00000443528 TLX1NBP0CAT3 122 aa9.87□□□□□ -0.83
ACTB-206ENST00000443528 IGLC3P0DOY3 106 aa9.87□□□□□ -0.83
ACTB-206ENST00000443528 NDUFA6P56556 154 aa9.87□□□□□ -0.83
ACTB-206ENST00000443528 C6orf226Q5I0X4 101 aa9.87□□□□□ -0.83
ACTB-206ENST00000443528 A0A1W2PNN7 141 aa9.86□□□□□ -0.83
ACTB-206ENST00000443528 LINC00310P59036 64 aa9.86□□□□□ -0.83
ACTB-206ENST00000443528 Q6ZRP5 223 aa9.86□□□□□ -0.83
ACTB-206ENST00000443528 BAGE3Q86Y29 109 aa9.86□□□□□ -0.83
ACTB-206ENST00000443528 MYCBP2O75592 4640 aa9.85□□□□□ -0.83
ACTB-206ENST00000443528 SPINK8P0C7L1 97 aa9.85□□□□□ -0.83
ACTB-206ENST00000443528 CKS1BP61024 79 aa9.85□□□□□ -0.83
ACTB-206ENST00000443528 C9orf116Q5BN46 136 aaPredicted RBP9.85□□□□□ -0.83
ACTB-206ENST00000443528 FAM19A2Q8N3H0 131 aa9.85□□□□□ -0.83
ACTB-206ENST00000443528 HSBP1O75506 76 aa9.84□□□□□ -0.83
ACTB-206ENST00000443528 C7orf33Q8WU49 177 aa9.84□□□□□ -0.83
ACTB-206ENST00000443528 SERF1AO75920 110 aa9.83□□□□□ -0.84
ACTB-206ENST00000443528 ZNF22P17026 224 aaPredicted RBP9.83□□□□□ -0.84
ACTB-206ENST00000443528 HNRNPA3P51991 378 aaKnown RBP9.83□□□□□ -0.84
ACTB-206ENST00000443528 IFI27L1Q96BM0 104 aa9.83□□□□□ -0.84
ACTB-206ENST00000443528 FLG2Q5D862 2391 aaPredicted RBP9.83□□□□□ -0.84
ACTB-206ENST00000443528 NDUFC2-KCTD14E9PQ53 114 aa9.82□□□□□ -0.84
ACTB-206ENST00000443528 NUPR1O60356 82 aa9.82□□□□□ -0.84
ACTB-206ENST00000443528 COX7B2Q8TF08 81 aa9.82□□□□□ -0.84
ACTB-206ENST00000443528 C11orf86A6NJI1 115 aa9.81□□□□□ -0.84
ACTB-206ENST00000443528 F8VRH5 84 aa9.81□□□□□ -0.84
ACTB-206ENST00000443528 H3BRM9 83 aa9.81□□□□□ -0.84
ACTB-206ENST00000443528 GAGE2EQ4V326 116 aa9.81□□□□□ -0.84
ACTB-206ENST00000443528 GAGE2DQ9UEU5 116 aa9.81□□□□□ -0.84
ACTB-206ENST00000443528 TRAV12-1A0A0B4J245 112 aa9.8□□□□□ -0.84
ACTB-206ENST00000443528 IGLV5-39A0A0G2JS06 123 aa9.8□□□□□ -0.84
ACTB-206ENST00000443528 FAM168BA1KXE4 195 aa9.8□□□□□ -0.84
ACTB-206ENST00000443528 CXCL5P42830 114 aa9.8□□□□□ -0.84
ACTB-206ENST00000443528 CHTOPQ9Y3Y2 248 aaKnown RBP9.8□□□□□ -0.84
ACTB-206ENST00000443528 PKHD1L1Q86WI1 4243 aa9.78□□□□□ -0.84
ACTB-206ENST00000443528 C9orf129Q5T035 196 aaKnown RBP9.78□□□□□ -0.84
ACTB-206ENST00000443528 KRTAP7-1Q8IUC3 87 aa9.78□□□□□ -0.84
ACTB-206ENST00000443528 PRR3P79522 188 aaKnown RBP9.77□□□□□ -0.85
ACTB-206ENST00000443528 TMEM170BQ5T4T1 132 aa9.77□□□□□ -0.85
ACTB-206ENST00000443528 PHF5AQ7RTV0 110 aaKnown RBP9.77□□□□□ -0.85
ACTB-206ENST00000443528 HIST1H2BKO60814 126 aa9.76□□□□□ -0.85
ACTB-206ENST00000443528 LEPROTL1O95214 131 aa9.76□□□□□ -0.85
ACTB-206ENST00000443528 HIST1H2BJP06899 126 aa9.76□□□□□ -0.85
ACTB-206ENST00000443528 HIST1H2BOP23527 126 aa9.76□□□□□ -0.85
ACTB-206ENST00000443528 HIST1H2BBP33778 126 aa9.76□□□□□ -0.85
ACTB-206ENST00000443528 HIST1H2BDP58876 126 aa9.76□□□□□ -0.85
ACTB-206ENST00000443528 HIST1H2BCP62807 126 aa9.76□□□□□ -0.85
ACTB-206ENST00000443528 HIST2H2BEQ16778 126 aa9.76□□□□□ -0.85
ACTB-206ENST00000443528 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.76□□□□□ -0.85
ACTB-206ENST00000443528 HIST1H2BHQ93079 126 aa9.76□□□□□ -0.85
ACTB-206ENST00000443528 HIST1H2BNQ99877 126 aa9.76□□□□□ -0.85
ACTB-206ENST00000443528 HIST1H2BMQ99879 126 aa9.76□□□□□ -0.85
ACTB-206ENST00000443528 FAM19A5Q7Z5A7 132 aaPredicted RBP9.75□□□□□ -0.85
ACTB-206ENST00000443528 LRP1Q07954 4544 aaKnown RBP9.74□□□□□ -0.85
ACTB-206ENST00000443528 KRTAP29-1A8MX34 341 aaPredicted RBP9.74□□□□□ -0.85
ACTB-206ENST00000443528 ODF1Q14990 250 aa9.74□□□□□ -0.85
ACTB-206ENST00000443528 TMEM223A0PJW6 202 aa9.73□□□□□ -0.85
ACTB-206ENST00000443528 FABP4P15090 132 aa9.73□□□□□ -0.85
ACTB-206ENST00000443528 XAGE1AQ9HD64 81 aa9.73□□□□□ -0.85
ACTB-206ENST00000443528 H0Y8G0 127 aa9.72□□□□□ -0.85
ACTB-206ENST00000443528 KRTAP11-1Q8IUC1 163 aa9.72□□□□□ -0.85
ACTB-206ENST00000443528 HSPB8Q9UJY1 196 aa9.72□□□□□ -0.85
ACTB-206ENST00000443528 FAT3Q8TDW7 4589 aa9.71□□□□□ -0.85
ACTB-206ENST00000443528 SERTAD4-AS1Q5TG53 156 aa9.71□□□□□ -0.86
ACTB-206ENST00000443528 PSORS1C2Q9UIG4 136 aa9.71□□□□□ -0.86
ACTB-206ENST00000443528 DMBT1Q9UGM3 2413 aaPredicted RBP9.7□□□□□ -0.86
ACTB-206ENST00000443528 M0QXV9 152 aa9.7□□□□□ -0.86
ACTB-206ENST00000443528 HERC1Q15751 4861 aa9.7□□□□□ -0.86
ACTB-206ENST00000443528 OXTP01178 125 aa9.69□□□□□ -0.86
ACTB-206ENST00000443528 ZNF625Q96I27 306 aaPredicted RBP9.69□□□□□ -0.86
ACTB-206ENST00000443528 SRSF9Q13242 221 aaKnown RBP eCLIP9.68□□□□□ -0.86
ACTB-206ENST00000443528 J3QL48 77 aa9.67□□□□□ -0.86
ACTB-206ENST00000443528 PFN2P35080 140 aa9.67□□□□□ -0.86
ACTB-206ENST00000443528 ERG28Q9UKR5 140 aa9.67□□□□□ -0.86
ACTB-206ENST00000443528 C22orf24Q9Y442 160 aa9.67□□□□□ -0.86
ACTB-206ENST00000443528 ATP6V1G1O75348 118 aa9.66□□□□□ -0.86
ACTB-206ENST00000443528 S100A1P23297 94 aa9.66□□□□□ -0.86
ACTB-206ENST00000443528 PMCHL2Q9BQD1 86 aa9.66□□□□□ -0.86
ACTB-206ENST00000443528 PLNP26678 52 aa9.65□□□□□ -0.86
ACTB-206ENST00000443528 C1orf137Q5JT78 98 aa9.65□□□□□ -0.86
ACTB-206ENST00000443528 SFTA2Q6UW10 78 aa9.65□□□□□ -0.86
ACTB-206ENST00000443528 SPINK6Q6UWN8 80 aa9.65□□□□□ -0.86
ACTB-206ENST00000443528 MAP1LC3CQ9BXW4 147 aa9.65□□□□□ -0.86
ACTB-206ENST00000443528 PLA2G2DQ9UNK4 145 aa9.65□□□□□ -0.86
ACTB-206ENST00000443528 DPM2O94777 84 aa9.64□□□□□ -0.87
ACTB-206ENST00000443528 UBE2BP63146 152 aa9.64□□□□□ -0.87
ACTB-206ENST00000443528 COX17Q14061 63 aa9.64□□□□□ -0.87
ACTB-206ENST00000443528 COA6Q5JTJ3 125 aaKnown RBP9.64□□□□□ -0.87
ACTB-206ENST00000443528 IGKCP01834 107 aa9.63□□□□□ -0.87
ACTB-206ENST00000443528 TP73-AS1Q9UF72 201 aa9.63□□□□□ -0.87
ACTB-206ENST00000443528 MRPL55Q7Z7F7 128 aaKnown RBP9.62□□□□□ -0.87
ACTB-206ENST00000443528 SND1-IT1Q9HBX3 110 aa9.62□□□□□ -0.87
ACTB-206ENST00000443528 IGLV5-37A0A075B6J1 123 aa9.61□□□□□ -0.87
ACTB-206ENST00000443528 SYS1-DBNDD2H3BUS1 97 aa9.61□□□□□ -0.87
ACTB-206ENST00000443528 IGLV7-43P04211 117 aa9.61□□□□□ -0.87
ACTB-206ENST00000443528 TSPEAR-AS2P59090 65 aa9.61□□□□□ -0.87
ACTB-206ENST00000443528 LBHQ53QV2 105 aaPredicted RBP9.61□□□□□ -0.87
ACTB-206ENST00000443528 LEPROTO15243 131 aa9.6□□□□□ -0.87
ACTB-206ENST00000443528 MT1HL1P0DM35 61 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms