RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 HERVK_113P63121 156 aa8.28□□□□□ -1.08
PTPRE-203ENST00000442830 PNRC1Q12796 327 aaPredicted RBP8.28□□□□□ -1.08
PTPRE-203ENST00000442830 KRTAP7-1Q8IUC3 87 aa8.28□□□□□ -1.08
PTPRE-203ENST00000442830 PRR4Q16378 134 aa8.27□□□□□ -1.09
PTPRE-203ENST00000442830 ALKBH7Q9BT30 221 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-203ENST00000442830 NXT2Q9NPJ8 142 aaKnown RBP8.27□□□□□ -1.09
PTPRE-203ENST00000442830 LPAP08519 4548 aa8.27□□□□□ -1.09
PTPRE-203ENST00000442830 LOC389332A0A1B0GUA5 103 aa8.26□□□□□ -1.09
PTPRE-203ENST00000442830 F8VRH5 84 aa8.26□□□□□ -1.09
PTPRE-203ENST00000442830 RPL28P46779 137 aaKnown RBP8.26□□□□□ -1.09
PTPRE-203ENST00000442830 SRSF3P84103 164 aaKnown RBP8.26□□□□□ -1.09
PTPRE-203ENST00000442830 ANAPC16Q96DE5 110 aa8.26□□□□□ -1.09
PTPRE-203ENST00000442830 TOMM7Q9P0U1 55 aa8.26□□□□□ -1.09
PTPRE-203ENST00000442830 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
PTPRE-203ENST00000442830 MT-ND4LP03901 98 aa8.25□□□□□ -1.09
PTPRE-203ENST00000442830 GEMIN7Q9H840 131 aaKnown RBP8.25□□□□□ -1.09
PTPRE-203ENST00000442830 C22orf24Q9Y442 160 aa8.25□□□□□ -1.09
PTPRE-203ENST00000442830 LINC00173Q6ZV60 143 aa8.24□□□□□ -1.09
PTPRE-203ENST00000442830 TIMM17AQ99595 171 aa8.24□□□□□ -1.09
PTPRE-203ENST00000442830 IGIPA6NJ69 53 aa8.23□□□□□ -1.09
PTPRE-203ENST00000442830 MRPL55Q7Z7F7 128 aaKnown RBP8.23□□□□□ -1.09
PTPRE-203ENST00000442830 BCE1O60756 84 aa8.22□□□□□ -1.09
PTPRE-203ENST00000442830 CTDSP1Q9GZU7 261 aa8.22□□□□□ -1.09
PTPRE-203ENST00000442830 LOC100996750A0A140TA64 210 aa8.21□□□□□ -1.1
PTPRE-203ENST00000442830 CRYGAP11844 174 aa8.21□□□□□ -1.1
PTPRE-203ENST00000442830 LINC00469Q8N7U9 141 aa8.21□□□□□ -1.1
PTPRE-203ENST00000442830 KRTAP4-6Q9BYQ5 205 aa8.21□□□□□ -1.1
PTPRE-203ENST00000442830 PDZD11Q5EBL8 140 aa8.2□□□□□ -1.1
PTPRE-203ENST00000442830 TOMM6Q96B49 74 aa8.2□□□□□ -1.1
PTPRE-203ENST00000442830 XAGE1AQ9HD64 81 aa8.2□□□□□ -1.1
PTPRE-203ENST00000442830 CDKN2A-AS1Q9UH64 79 aa8.2□□□□□ -1.1
PTPRE-203ENST00000442830 A6NJY4 79 aa8.19□□□□□ -1.1
PTPRE-203ENST00000442830 ERASQ7Z444 233 aa8.19□□□□□ -1.1
PTPRE-203ENST00000442830 TYMSOSQ8TAI1 123 aa8.19□□□□□ -1.1
PTPRE-203ENST00000442830 CTAG1AP78358 180 aa8.18□□□□□ -1.1
PTPRE-203ENST00000442830 ZC2HC1BQ5TFG8 222 aa8.18□□□□□ -1.1
PTPRE-203ENST00000442830 TINCRA0A1B0GVN0 87 aa8.17□□□□□ -1.1
PTPRE-203ENST00000442830 IGLV5-37A0A075B6J1 123 aa8.16□□□□□ -1.1
PTPRE-203ENST00000442830 TRAV9-1A0A075B6T8 112 aa8.16□□□□□ -1.1
PTPRE-203ENST00000442830 SMIM1B2RUZ4 78 aa8.16□□□□□ -1.1
PTPRE-203ENST00000442830 RAB14P61106 215 aa8.16□□□□□ -1.1
PTPRE-203ENST00000442830 NKAPP1Q8N9T2 125 aa8.16□□□□□ -1.1
PTPRE-203ENST00000442830 COX7B2Q8TF08 81 aa8.16□□□□□ -1.1
PTPRE-203ENST00000442830 SCGB3A1Q96QR1 104 aa8.16□□□□□ -1.1
PTPRE-203ENST00000442830 IGLV5-45A0A087WSX0 123 aa8.15□□□□□ -1.1
PTPRE-203ENST00000442830 FAM229BQ4G0N7 80 aa8.15□□□□□ -1.1
PTPRE-203ENST00000442830 LINC00167Q96N53 147 aa8.15□□□□□ -1.1
PTPRE-203ENST00000442830 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
PTPRE-203ENST00000442830 TSPAN13O95857 204 aa8.14□□□□□ -1.11
PTPRE-203ENST00000442830 UBE2AP49459 152 aa8.14□□□□□ -1.11
PTPRE-203ENST00000442830 A0A087X002 238 aa8.13□□□□□ -1.11
PTPRE-203ENST00000442830 H3BRM9 83 aa8.13□□□□□ -1.11
PTPRE-203ENST00000442830 ATP5LO75964 103 aa8.13□□□□□ -1.11
PTPRE-203ENST00000442830 RPL37AP8A6NKH3 93 aa8.11□□□□□ -1.11
PTPRE-203ENST00000442830 A0A1B0GVG6 124 aa8.1□□□□□ -1.11
PTPRE-203ENST00000442830 LINC01546A6NGU7 62 aa8.1□□□□□ -1.11
PTPRE-203ENST00000442830 PMVKQ15126 192 aa8.1□□□□□ -1.11
PTPRE-203ENST00000442830 COX19Q49B96 90 aa8.1□□□□□ -1.11
PTPRE-203ENST00000442830 SFTA2Q6UW10 78 aa8.1□□□□□ -1.11
PTPRE-203ENST00000442830 KRTAP13-1Q8IUC0 172 aa8.1□□□□□ -1.11
PTPRE-203ENST00000442830 IGKV2D-26A0A0A0MRZ7 120 aa8.09□□□□□ -1.11
PTPRE-203ENST00000442830 S100PP25815 95 aa8.09□□□□□ -1.11
PTPRE-203ENST00000442830 LINC00304Q8N9R0 145 aa8.09□□□□□ -1.11
PTPRE-203ENST00000442830 CST9LQ9H4G1 147 aa8.09□□□□□ -1.11
PTPRE-203ENST00000442830 MUC2Q02817 5179 aa8.09□□□□□ -1.11
PTPRE-203ENST00000442830 GAGE10A6NGK3 116 aa8.08□□□□□ -1.12
PTPRE-203ENST00000442830 RPL24P83731 157 aaKnown RBP8.08□□□□□ -1.12
PTPRE-203ENST00000442830 COX17Q14061 63 aa8.08□□□□□ -1.12
PTPRE-203ENST00000442830 GNB1LQ9BYB4 327 aa8.08□□□□□ -1.12
PTPRE-203ENST00000442830 SMCO4Q9NRQ5 59 aa8.08□□□□□ -1.12
PTPRE-203ENST00000442830 SPINK8P0C7L1 97 aa8.07□□□□□ -1.12
PTPRE-203ENST00000442830 RAB5BP61020 215 aa8.07□□□□□ -1.12
PTPRE-203ENST00000442830 KIAA1644Q3SXP7 199 aa8.07□□□□□ -1.12
PTPRE-203ENST00000442830 FA2HQ7L5A8 372 aa8.07□□□□□ -1.12
PTPRE-203ENST00000442830 ADCYAP1P18509 176 aa8.06□□□□□ -1.12
PTPRE-203ENST00000442830 TPRXLQ17RH7 258 aa8.06□□□□□ -1.12
PTPRE-203ENST00000442830 UQCC3Q6UW78 93 aa8.06□□□□□ -1.12
PTPRE-203ENST00000442830 IGKV2-28A0A075B6P5 120 aa8.05□□□□□ -1.12
PTPRE-203ENST00000442830 IGKV2D-28P01615 120 aa8.05□□□□□ -1.12
PTPRE-203ENST00000442830 KRTAP13-2Q52LG2 175 aa8.05□□□□□ -1.12
PTPRE-203ENST00000442830 IGLV5-39A0A0G2JS06 123 aa8.04□□□□□ -1.12
PTPRE-203ENST00000442830 IGLC3P0DOY3 106 aa8.04□□□□□ -1.12
PTPRE-203ENST00000442830 CDIP1Q9H305 208 aa8.04□□□□□ -1.12
PTPRE-203ENST00000442830 PFN2P35080 140 aa8.03□□□□□ -1.12
PTPRE-203ENST00000442830 CLLU1Q5K131 121 aa8.03□□□□□ -1.12
PTPRE-203ENST00000442830 SPAG11AQ6PDA7 123 aa8.03□□□□□ -1.12
PTPRE-203ENST00000442830 FAM19A1Q7Z5A9 133 aa8.03□□□□□ -1.12
PTPRE-203ENST00000442830 TMEM126AQ9H061 195 aa8.03□□□□□ -1.12
PTPRE-203ENST00000442830 ERG28Q9UKR5 140 aa8.03□□□□□ -1.12
PTPRE-203ENST00000442830 VPREB1P12018 145 aa8.02□□□□□ -1.13
PTPRE-203ENST00000442830 SND1-IT1Q9HBX3 110 aa8.02□□□□□ -1.13
PTPRE-203ENST00000442830 ANAPC11Q9NYG5 84 aa8.02□□□□□ -1.13
PTPRE-203ENST00000442830 IGLV7-46A0A075B6I9 117 aa8.01□□□□□ -1.13
PTPRE-203ENST00000442830 TMEM218A2RU14 115 aa8□□□□□ -1.13
PTPRE-203ENST00000442830 PRLHP81277 87 aa8□□□□□ -1.13
PTPRE-203ENST00000442830 SEC11CQ9BY50 192 aa8□□□□□ -1.13
PTPRE-203ENST00000442830 ZNF706Q9Y5V0 76 aaPredicted RBP8□□□□□ -1.13
PTPRE-203ENST00000442830 ZNF22P17026 224 aaPredicted RBP7.99□□□□□ -1.13
PTPRE-203ENST00000442830 FABP9Q0Z7S8 132 aa7.99□□□□□ -1.13
PTPRE-203ENST00000442830 CBLN2Q8IUK8 224 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 272.4 ms