RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 OBSCN-AS1Q96MR7 158 aa14.31□□□□□ -0.12
SHOX2-203ENST00000441443 OXTP01178 125 aa14.31□□□□□ -0.12
SHOX2-203ENST00000441443 FSHBP01225 129 aa14.31□□□□□ -0.12
SHOX2-203ENST00000441443 H0YGX0 51 aa14.3□□□□□ -0.12
SHOX2-203ENST00000441443 PAX4O43316 350 aa14.3□□□□□ -0.12
SHOX2-203ENST00000441443 TMEM258P61165 79 aa14.29□□□□□ -0.12
SHOX2-203ENST00000441443 WFDC9Q8NEX5 89 aa14.29□□□□□ -0.12
SHOX2-203ENST00000441443 HILS1P60008 231 aa14.29□□□□□ -0.12
SHOX2-203ENST00000441443 TMEM243Q9BU79 118 aa14.28□□□□□ -0.12
SHOX2-203ENST00000441443 LOC100131303A0A0U1RQF7 123 aa14.28□□□□□ -0.12
SHOX2-203ENST00000441443 C1orf158Q8N1D5 194 aa14.28□□□□□ -0.12
SHOX2-203ENST00000441443 C11orf68Q9H3H3 251 aaKnown RBP14.27□□□□□ -0.12
SHOX2-203ENST00000441443 SETXQ7Z333 2677 aaKnown RBP14.26□□□□□ -0.13
SHOX2-203ENST00000441443 TRBV10-1A0A0K0K1A3 114 aa14.26□□□□□ -0.13
SHOX2-203ENST00000441443 UNC79Q9P2D8 2635 aa14.26□□□□□ -0.13
SHOX2-203ENST00000441443 SS18Q15532 418 aa14.25□□□□□ -0.13
SHOX2-203ENST00000441443 NOP10Q9NPE3 64 aaKnown RBP14.23□□□□□ -0.13
SHOX2-203ENST00000441443 IGLV4-60A0A075B6I1 120 aa14.23□□□□□ -0.13
SHOX2-203ENST00000441443 C4orf26Q17RF5 130 aa14.23□□□□□ -0.13
SHOX2-203ENST00000441443 ORMDL1Q9P0S3 153 aa14.23□□□□□ -0.13
SHOX2-203ENST00000441443 FHL2Q14192 279 aa14.22□□□□□ -0.13
SHOX2-203ENST00000441443 KRTAP1-3Q8IUG1 177 aa14.22□□□□□ -0.13
SHOX2-203ENST00000441443 STHQ8IWL8 128 aa14.22□□□□□ -0.13
SHOX2-203ENST00000441443 TRAV23DV6A0A075B6W5 121 aa14.21□□□□□ -0.13
SHOX2-203ENST00000441443 DEFB114Q30KQ6 69 aa14.21□□□□□ -0.13
SHOX2-203ENST00000441443 IL17DQ8TAD2 202 aa14.21□□□□□ -0.13
SHOX2-203ENST00000441443 ODF3L2Q3SX64 289 aa14.2□□□□□ -0.14
SHOX2-203ENST00000441443 DNAJC9-AS1A6NH13 148 aa14.2□□□□□ -0.14
SHOX2-203ENST00000441443 CCKP06307 115 aa14.2□□□□□ -0.14
SHOX2-203ENST00000441443 FAM19A1Q7Z5A9 133 aa14.2□□□□□ -0.14
SHOX2-203ENST00000441443 AKAP9Q99996 3911 aa14.19□□□□□ -0.14
SHOX2-203ENST00000441443 IGHV3OR16-9A0A0B4J2B5 98 aa14.19□□□□□ -0.14
SHOX2-203ENST00000441443 IBA57-AS1B1ANH7 110 aa14.19□□□□□ -0.14
SHOX2-203ENST00000441443 GHRHP01286 108 aa14.19□□□□□ -0.14
SHOX2-203ENST00000441443 C4orf3Q8WVX3 66 aa14.19□□□□□ -0.14
SHOX2-203ENST00000441443 PRR3P79522 188 aaKnown RBP14.18□□□□□ -0.14
SHOX2-203ENST00000441443 TRBV6-4A0A1B0GX49 114 aa14.17□□□□□ -0.14
SHOX2-203ENST00000441443 ENHOQ6UWT2 76 aa14.17□□□□□ -0.14
SHOX2-203ENST00000441443 ESM1Q9NQ30 184 aa14.17□□□□□ -0.14
SHOX2-203ENST00000441443 HRCT1Q6UXD1 115 aa14.17□□□□□ -0.14
SHOX2-203ENST00000441443 TRGV2A0A075B6R0 118 aa14.16□□□□□ -0.14
SHOX2-203ENST00000441443 RNASE1P07998 156 aaKnown RBP14.16□□□□□ -0.14
SHOX2-203ENST00000441443 PLA2G2AP14555 144 aa14.15□□□□□ -0.14
SHOX2-203ENST00000441443 C6orf226Q5I0X4 101 aa14.15□□□□□ -0.14
SHOX2-203ENST00000441443 NBEAL2Q6ZNJ1 2754 aa14.15□□□□□ -0.14
SHOX2-203ENST00000441443 GCN1Q92616 2671 aaKnown RBP14.13□□□□□ -0.15
SHOX2-203ENST00000441443 Q5XG85 94 aa14.13□□□□□ -0.15
SHOX2-203ENST00000441443 A0A087WZ39 114 aa14.13□□□□□ -0.15
SHOX2-203ENST00000441443 PDZD2O15018 2839 aa14.13□□□□□ -0.15
SHOX2-203ENST00000441443 C20orf197Q8N268 126 aa14.12□□□□□ -0.15
SHOX2-203ENST00000441443 CCL24O00175 119 aa14.11□□□□□ -0.15
SHOX2-203ENST00000441443 LY6G6DO95868 133 aa14.11□□□□□ -0.15
SHOX2-203ENST00000441443 TRGV4A0A0C4DH28 118 aa14.1□□□□□ -0.15
SHOX2-203ENST00000441443 Q8N814 137 aa14.1□□□□□ -0.15
SHOX2-203ENST00000441443 XCL1P47992 114 aa14.09□□□□□ -0.15
SHOX2-203ENST00000441443 S100A7L2Q5SY68 101 aa14.09□□□□□ -0.15
SHOX2-203ENST00000441443 WFDC10AQ9H1F0 79 aa14.09□□□□□ -0.15
SHOX2-203ENST00000441443 TRBV6-8A0A0A6YYG3 113 aa14.09□□□□□ -0.15
SHOX2-203ENST00000441443 JMJD7-PLA2G4BH0Y9G9 81 aa14.09□□□□□ -0.15
SHOX2-203ENST00000441443 NANOS2P60321 138 aaKnown RBP14.09□□□□□ -0.15
SHOX2-203ENST00000441443 CLPSL2Q6UWE3 100 aa14.07□□□□□ -0.16
SHOX2-203ENST00000441443 LINC00959A0A1B0GUT2 108 aa14.07□□□□□ -0.16
SHOX2-203ENST00000441443 TMEM86BQ8N661 226 aa14.07□□□□□ -0.16
SHOX2-203ENST00000441443 PLAC8L1A1L4L8 177 aa14.06□□□□□ -0.16
SHOX2-203ENST00000441443 TMEM256-PLSCR3K7ERE1 68 aa14.06□□□□□ -0.16
SHOX2-203ENST00000441443 TRAV25A0A0B4J276 109 aa14.05□□□□□ -0.16
SHOX2-203ENST00000441443 WIPF1O43516 503 aa14.05□□□□□ -0.16
SHOX2-203ENST00000441443 LINC00167Q96N53 147 aa14.05□□□□□ -0.16
SHOX2-203ENST00000441443 SMR3AQ99954 134 aa14.05□□□□□ -0.16
SHOX2-203ENST00000441443 UBL5Q9BZL1 73 aa14.05□□□□□ -0.16
SHOX2-203ENST00000441443 RPL35AP18077 110 aaKnown RBP14.04□□□□□ -0.16
SHOX2-203ENST00000441443 NDUFC2O95298 119 aa14.04□□□□□ -0.16
SHOX2-203ENST00000441443 ATP5EP2Q5VTU8 51 aa14.04□□□□□ -0.16
SHOX2-203ENST00000441443 LINC01006Q8NI28 216 aa14.03□□□□□ -0.16
SHOX2-203ENST00000441443 GIG44P09565 113 aaPredicted RBP14.03□□□□□ -0.16
SHOX2-203ENST00000441443 VWFP04275 2813 aa14.02□□□□□ -0.17
SHOX2-203ENST00000441443 LYPD5Q6UWN5 251 aa14.01□□□□□ -0.17
SHOX2-203ENST00000441443 ATRQ13535 2644 aa13.99□□□□□ -0.17
SHOX2-203ENST00000441443 FAM236DA0A1B0GTK5 79 aa13.99□□□□□ -0.17
SHOX2-203ENST00000441443 FAM236CP0DP71 79 aa13.99□□□□□ -0.17
SHOX2-203ENST00000441443 C6orf99Q4VX62 202 aa13.99□□□□□ -0.17
SHOX2-203ENST00000441443 M0R2N4 97 aa13.99□□□□□ -0.17
SHOX2-203ENST00000441443 C16orf74Q96GX8 76 aa13.99□□□□□ -0.17
SHOX2-203ENST00000441443 NDUFC2-KCTD14E9PQ53 114 aa13.98□□□□□ -0.17
SHOX2-203ENST00000441443 C9orf116Q5BN46 136 aaPredicted RBP13.98□□□□□ -0.17
SHOX2-203ENST00000441443 KRTAP1-1Q07627 177 aa13.97□□□□□ -0.17
SHOX2-203ENST00000441443 OTOGQ6ZRI0 2925 aa13.96□□□□□ -0.18
SHOX2-203ENST00000441443 HAMPP81172 84 aa13.96□□□□□ -0.18
SHOX2-203ENST00000441443 Q8IZM0 81 aa13.96□□□□□ -0.18
SHOX2-203ENST00000441443 Q8NDZ9 215 aa13.96□□□□□ -0.18
SHOX2-203ENST00000441443 H7BZZ5 65 aa13.95□□□□□ -0.18
SHOX2-203ENST00000441443 A0A096LPF7 62 aa13.94□□□□□ -0.18
SHOX2-203ENST00000441443 TRBV10-3A0A0K0K1G6 114 aa13.94□□□□□ -0.18
SHOX2-203ENST00000441443 J3QKU1 62 aa13.94□□□□□ -0.18
SHOX2-203ENST00000441443 SNURFQ9Y675 71 aa13.94□□□□□ -0.18
SHOX2-203ENST00000441443 DEFB130BP0DP73 79 aa13.94□□□□□ -0.18
SHOX2-203ENST00000441443 DEFB130AP0DP74 79 aa13.94□□□□□ -0.18
SHOX2-203ENST00000441443 LAMTOR3Q9UHA4 124 aa13.94□□□□□ -0.18
SHOX2-203ENST00000441443 RBM3P98179 157 aaKnown RBP13.93□□□□□ -0.18
SHOX2-203ENST00000441443 TRAV10A0A0B4J240 114 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms