RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 A0A087WTM6 91 aa13.8□□□□□ -0.2
VPS13B-204ENST00000441350 ZNF815PA8K554 130 aa13.8□□□□□ -0.2
VPS13B-204ENST00000441350 CKS1BP61024 79 aa13.8□□□□□ -0.2
VPS13B-204ENST00000441350 C14orf177Q52M58 125 aa13.8□□□□□ -0.2
VPS13B-204ENST00000441350 BOD1L2Q8IYS8 172 aa13.8□□□□□ -0.2
VPS13B-204ENST00000441350 DNAH17Q9UFH2 4485 aa13.8□□□□□ -0.2
VPS13B-204ENST00000441350 MYMXA0A1B0GTQ4 84 aa13.79□□□□□ -0.2
VPS13B-204ENST00000441350 F8WDY8 70 aa13.79□□□□□ -0.2
VPS13B-204ENST00000441350 RYR2Q92736 4967 aa13.79□□□□□ -0.2
VPS13B-204ENST00000441350 DLEU1O43261 78 aa13.79□□□□□ -0.2
VPS13B-204ENST00000441350 SFTA2Q6UW10 78 aa13.79□□□□□ -0.2
VPS13B-204ENST00000441350 SLPIP03973 132 aa13.78□□□□□ -0.2
VPS13B-204ENST00000441350 C10orf25Q5T742 122 aa13.78□□□□□ -0.2
VPS13B-204ENST00000441350 UNQ6190/PRO20217Q6UXQ8 127 aa13.78□□□□□ -0.2
VPS13B-204ENST00000441350 TP73-AS1Q9UF72 201 aa13.78□□□□□ -0.2
VPS13B-204ENST00000441350 CAMK2N2Q96S95 79 aa13.77□□□□□ -0.21
VPS13B-204ENST00000441350 SLC25A34Q6PIV7 304 aa13.76□□□□□ -0.21
VPS13B-204ENST00000441350 PRO1933Q9H354 126 aa13.76□□□□□ -0.21
VPS13B-204ENST00000441350 HERV-K104P63124 156 aa13.75□□□□□ -0.21
VPS13B-204ENST00000441350 TNP2Q05952 138 aa13.75□□□□□ -0.21
VPS13B-204ENST00000441350 SYCNQ0VAF6 134 aa13.75□□□□□ -0.21
VPS13B-204ENST00000441350 Q6ZRU5 148 aa13.75□□□□□ -0.21
VPS13B-204ENST00000441350 Q8N814 137 aa13.75□□□□□ -0.21
VPS13B-204ENST00000441350 A0A0J9YXY3 114 aa13.74□□□□□ -0.21
VPS13B-204ENST00000441350 C6orf48Q9UBA6 75 aa13.73□□□□□ -0.21
VPS13B-204ENST00000441350 CNBPP62633 177 aaKnown RBP13.72□□□□□ -0.21
VPS13B-204ENST00000441350 UQCR10Q9UDW1 63 aa13.72□□□□□ -0.21
VPS13B-204ENST00000441350 TRBV30A0A0K0K1B3 111 aa13.72□□□□□ -0.21
VPS13B-204ENST00000441350 CARD19Q96LW7 228 aa13.72□□□□□ -0.21
VPS13B-204ENST00000441350 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.7□□□□□ -0.22
VPS13B-204ENST00000441350 SCGB1D4Q6XE38 83 aa13.7□□□□□ -0.22
VPS13B-204ENST00000441350 MIEN1Q9BRT3 115 aa13.7□□□□□ -0.22
VPS13B-204ENST00000441350 TSTD3H0UI37 97 aa13.69□□□□□ -0.22
VPS13B-204ENST00000441350 RNF151Q2KHN1 245 aa13.69□□□□□ -0.22
VPS13B-204ENST00000441350 C9orf116Q5BN46 136 aaPredicted RBP13.69□□□□□ -0.22
VPS13B-204ENST00000441350 C2orf91Q6ZV80 131 aa13.68□□□□□ -0.22
VPS13B-204ENST00000441350 ERG28Q9UKR5 140 aa13.68□□□□□ -0.22
VPS13B-204ENST00000441350 FAT2Q9NYQ8 4349 aa13.68□□□□□ -0.22
VPS13B-204ENST00000441350 EREGO14944 169 aa13.68□□□□□ -0.22
VPS13B-204ENST00000441350 LITAFQ99732 161 aa13.68□□□□□ -0.22
VPS13B-204ENST00000441350 LINC00587B1AMM8 73 aa13.67□□□□□ -0.22
VPS13B-204ENST00000441350 TIMM17BO60830 172 aa13.67□□□□□ -0.22
VPS13B-204ENST00000441350 MEIG1Q5JSS6 88 aa13.67□□□□□ -0.22
VPS13B-204ENST00000441350 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.66□□□□□ -0.22
VPS13B-204ENST00000441350 SMIM13P0DJ93 91 aa13.66□□□□□ -0.22
VPS13B-204ENST00000441350 COX17Q14061 63 aa13.66□□□□□ -0.22
VPS13B-204ENST00000441350 LINC00336Q6ZUF6 198 aa13.66□□□□□ -0.22
VPS13B-204ENST00000441350 HIGD1BQ9P298 99 aa13.66□□□□□ -0.22
VPS13B-204ENST00000441350 PFN2P35080 140 aa13.64□□□□□ -0.23
VPS13B-204ENST00000441350 CIRBPQ14011 172 aaKnown RBP13.64□□□□□ -0.23
VPS13B-204ENST00000441350 ADAMTSL4-AS1Q5T5F5 129 aa13.64□□□□□ -0.23
VPS13B-204ENST00000441350 HECTD4Q9Y4D8 3996 aa13.64□□□□□ -0.23
VPS13B-204ENST00000441350 A0A0U1RRA0 63 aa13.63□□□□□ -0.23
VPS13B-204ENST00000441350 LINC00158P58513 81 aa13.63□□□□□ -0.23
VPS13B-204ENST00000441350 C9orf163Q8N9P6 203 aa13.63□□□□□ -0.23
VPS13B-204ENST00000441350 TMEM238C9JI98 176 aa13.62□□□□□ -0.23
VPS13B-204ENST00000441350 DNAH11Q96DT5 4516 aa13.62□□□□□ -0.23
VPS13B-204ENST00000441350 TLX1NBP0CAT3 122 aa13.61□□□□□ -0.23
VPS13B-204ENST00000441350 SPANXB1Q9NS25 103 aaPredicted RBP13.61□□□□□ -0.23
VPS13B-204ENST00000441350 NDUFC2-KCTD14E9PQ53 114 aa13.61□□□□□ -0.23
VPS13B-204ENST00000441350 HNRNPA3P51991 378 aaKnown RBP13.61□□□□□ -0.23
VPS13B-204ENST00000441350 MIR7-3HGQ8N6C7 128 aa13.6□□□□□ -0.23
VPS13B-204ENST00000441350 DAND5Q8N907 189 aa13.6□□□□□ -0.23
VPS13B-204ENST00000441350 SPANXDQ9BXN6 97 aa13.6□□□□□ -0.23
VPS13B-204ENST00000441350 SPANXCQ9NY87 97 aa13.6□□□□□ -0.23
VPS13B-204ENST00000441350 FUSP35637 526 aaKnown RBP eCLIP13.59□□□□□ -0.23
VPS13B-204ENST00000441350 KRTAP10-2P60368 255 aa13.58□□□□□ -0.24
VPS13B-204ENST00000441350 RYR3Q15413 4870 aa13.58□□□□□ -0.24
VPS13B-204ENST00000441350 Q6ZRP5 223 aa13.57□□□□□ -0.24
VPS13B-204ENST00000441350 Q6ZVH6 145 aa13.57□□□□□ -0.24
VPS13B-204ENST00000441350 PKD1P98161 4303 aa13.57□□□□□ -0.24
VPS13B-204ENST00000441350 IGLV5-52A0A0A0MRZ9 124 aa13.57□□□□□ -0.24
VPS13B-204ENST00000441350 LOC107984640A0A0U1RRK4 108 aa13.57□□□□□ -0.24
VPS13B-204ENST00000441350 DDTP30046 118 aa13.56□□□□□ -0.24
VPS13B-204ENST00000441350 SRSF9Q13242 221 aaKnown RBP eCLIP13.56□□□□□ -0.24
VPS13B-204ENST00000441350 LINC01620Q4KN68 170 aa13.55□□□□□ -0.24
VPS13B-204ENST00000441350 HIST1H4GQ99525 98 aa13.55□□□□□ -0.24
VPS13B-204ENST00000441350 SND1-IT1Q9HBX3 110 aa13.55□□□□□ -0.24
VPS13B-204ENST00000441350 PGPEP1Q9NXJ5 209 aa13.55□□□□□ -0.24
VPS13B-204ENST00000441350 PTTG1IPP53801 180 aa13.54□□□□□ -0.24
VPS13B-204ENST00000441350 SDIM1Q6ZPB5 146 aa13.54□□□□□ -0.24
VPS13B-204ENST00000441350 EIF4EBP3O60516 100 aaPredicted RBP13.53□□□□□ -0.24
VPS13B-204ENST00000441350 RPL18AQ02543 176 aaKnown RBP13.53□□□□□ -0.24
VPS13B-204ENST00000441350 TAL2Q16559 108 aa13.53□□□□□ -0.24
VPS13B-204ENST00000441350 A0A1B0GVY2 172 aa13.53□□□□□ -0.24
VPS13B-204ENST00000441350 GAGE2EQ4V326 116 aa13.53□□□□□ -0.24
VPS13B-204ENST00000441350 SOSTDC1Q6X4U4 206 aa13.53□□□□□ -0.24
VPS13B-204ENST00000441350 LINC00308Q8TCZ7 52 aa13.53□□□□□ -0.24
VPS13B-204ENST00000441350 GAGE2DQ9UEU5 116 aa13.53□□□□□ -0.24
VPS13B-204ENST00000441350 LOC107984156A0A0G2JMH3 177 aa13.52□□□□□ -0.25
VPS13B-204ENST00000441350 IFITM1P13164 125 aa13.52□□□□□ -0.25
VPS13B-204ENST00000441350 HSD52Q0P140 79 aa13.52□□□□□ -0.25
VPS13B-204ENST00000441350 ARL17AQ8IVW1 177 aa13.52□□□□□ -0.25
VPS13B-204ENST00000441350 PKIGQ9Y2B9 76 aa13.52□□□□□ -0.25
VPS13B-204ENST00000441350 GCSHP23434 173 aa13.51□□□□□ -0.25
VPS13B-204ENST00000441350 NPC2P61916 151 aa13.51□□□□□ -0.25
VPS13B-204ENST00000441350 CTAG1AP78358 180 aa13.51□□□□□ -0.25
VPS13B-204ENST00000441350 MUSTN1Q8IVN3 82 aa13.51□□□□□ -0.25
VPS13B-204ENST00000441350 PPDPFQ9H3Y8 114 aa13.51□□□□□ -0.25
VPS13B-204ENST00000441350 XAGE1AQ9HD64 81 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms