RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 CTXND1A0A1B0GTU2 59 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 FXYD1O00168 92 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 UQCR11O14957 56 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 SPINT3P49223 89 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 GNGT1P63211 74 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 KRTAP6-3Q3LI67 103 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 BAGE3Q86Y29 109 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 RTTNQ86VV8 2226 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 DLG5Q8TDM6 1919 aa1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 COL5A3P25940 1745 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P45-201ENST00000435986 C5P01031 1676 aa1.9□□□□□ -2.1
HMGB1P45-201ENST00000435986 TRGV2A0A075B6R0 118 aa1.9□□□□□ -2.11
HMGB1P45-201ENST00000435986 A0A087WTM6 91 aa1.9□□□□□ -2.11
HMGB1P45-201ENST00000435986 M0R3E3 92 aa1.9□□□□□ -2.11
HMGB1P45-201ENST00000435986 GDF5OSQ5U4N7 250 aa1.9□□□□□ -2.11
HMGB1P45-201ENST00000435986 Q6JHZ5 121 aa1.9□□□□□ -2.11
HMGB1P45-201ENST00000435986 Q6ZRN7 208 aaPredicted RBP1.9□□□□□ -2.11
HMGB1P45-201ENST00000435986 LINC00208Q96KT6 92 aa1.9□□□□□ -2.11
HMGB1P45-201ENST00000435986 WFDC6Q9BQY6 131 aa1.9□□□□□ -2.11
HMGB1P45-201ENST00000435986 DOT1LQ8TEK3 1739 aa1.9□□□□□ -2.11
HMGB1P45-201ENST00000435986 MED12Q93074 2177 aa1.9□□□□□ -2.11
HMGB1P45-201ENST00000435986 TOGARAM1Q9Y4F4 1720 aa1.89□□□□□ -2.11
HMGB1P45-201ENST00000435986 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P45-201ENST00000435986 MGPP08493 103 aa1.89□□□□□ -2.11
HMGB1P45-201ENST00000435986 ANKRD50Q9ULJ7 1429 aa1.89□□□□□ -2.11
HMGB1P45-201ENST00000435986 TNRC6CQ9HCJ0 1690 aaKnown RBP1.89□□□□□ -2.11
HMGB1P45-201ENST00000435986 ARFGEF1Q9Y6D6 1849 aa1.89□□□□□ -2.11
HMGB1P45-201ENST00000435986 TIAM2Q8IVF5 1701 aa1.88□□□□□ -2.11
HMGB1P45-201ENST00000435986 UBR3Q6ZT12 1888 aa1.88□□□□□ -2.11
HMGB1P45-201ENST00000435986 DOCK11Q5JSL3 2073 aa1.88□□□□□ -2.11
HMGB1P45-201ENST00000435986 SFTA3P0C7M3 94 aa1.88□□□□□ -2.11
HMGB1P45-201ENST00000435986 GCHFRP30047 84 aa1.88□□□□□ -2.11
HMGB1P45-201ENST00000435986 ATP5EP2Q5VTU8 51 aa1.88□□□□□ -2.11
HMGB1P45-201ENST00000435986 SPTBP11277 2137 aa1.88□□□□□ -2.11
HMGB1P45-201ENST00000435986 ABCA4P78363 2273 aa1.88□□□□□ -2.11
HMGB1P45-201ENST00000435986 FREM1Q5H8C1 2179 aa1.88□□□□□ -2.11
HMGB1P45-201ENST00000435986 ATP7BP35670 1465 aa1.88□□□□□ -2.11
HMGB1P45-201ENST00000435986 AFDNP55196 1824 aaKnown RBP1.87□□□□□ -2.11
HMGB1P45-201ENST00000435986 A0A087WXM4 84 aa1.87□□□□□ -2.11
HMGB1P45-201ENST00000435986 HCRTO43612 131 aa1.87□□□□□ -2.11
HMGB1P45-201ENST00000435986 COX8AP10176 69 aa1.87□□□□□ -2.11
HMGB1P45-201ENST00000435986 CAV3P56539 151 aa1.87□□□□□ -2.11
HMGB1P45-201ENST00000435986 COX17Q14061 63 aa1.87□□□□□ -2.11
HMGB1P45-201ENST00000435986 PCOTHQ58A44 107 aa1.87□□□□□ -2.11
HMGB1P45-201ENST00000435986 FDCSPQ8NFU4 85 aa1.87□□□□□ -2.11
HMGB1P45-201ENST00000435986 SMIM4Q8WVI0 70 aa1.87□□□□□ -2.11
HMGB1P45-201ENST00000435986 PROK2Q9HC23 129 aa1.87□□□□□ -2.11
HMGB1P45-201ENST00000435986 FN1P02751 2386 aaKnown RBP1.87□□□□□ -2.11
HMGB1P45-201ENST00000435986 C4AP0C0L4 1744 aa1.86□□□□□ -2.11
HMGB1P45-201ENST00000435986 C4BP0C0L5 1744 aa1.86□□□□□ -2.11
HMGB1P45-201ENST00000435986 PRRC2BQ5JSZ5 2229 aaKnown RBP1.86□□□□□ -2.11
HMGB1P45-201ENST00000435986 A0A087WVE0 104 aa1.86□□□□□ -2.11
HMGB1P45-201ENST00000435986 IFI27P40305 119 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P45-201ENST00000435986 Q6ZQY7 126 aa1.86□□□□□ -2.11
HMGB1P45-201ENST00000435986 LINC00846Q9NV44 126 aa1.86□□□□□ -2.11
HMGB1P45-201ENST00000435986 UBE2D4Q9Y2X8 147 aa1.86□□□□□ -2.11
HMGB1P45-201ENST00000435986 CICQ96RK0 1608 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P45-201ENST00000435986 PDCD11Q14690 1871 aaKnown RBP1.86□□□□□ -2.11
HMGB1P45-201ENST00000435986 TULP4Q9NRJ4 1543 aa1.86□□□□□ -2.11
HMGB1P45-201ENST00000435986 MAP2P11137 1827 aaKnown RBP1.85□□□□□ -2.11
HMGB1P45-201ENST00000435986 TRGV1A0A0A0MS02 117 aa1.85□□□□□ -2.11
HMGB1P45-201ENST00000435986 TRAV1-2A0A0B4J238 106 aa1.85□□□□□ -2.11
HMGB1P45-201ENST00000435986 ZNF137PP52743 207 aa1.85□□□□□ -2.11
HMGB1P45-201ENST00000435986 KRTAP13-4Q3LI77 160 aa1.85□□□□□ -2.11
HMGB1P45-201ENST00000435986 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
HMGB1P45-201ENST00000435986 SMIM5Q71RC9 77 aa1.85□□□□□ -2.11
HMGB1P45-201ENST00000435986 DEFB119Q8N690 84 aa1.85□□□□□ -2.11
HMGB1P45-201ENST00000435986 PCDH15Q96QU1 1955 aa1.85□□□□□ -2.11
HMGB1P45-201ENST00000435986 KDM3BQ7LBC6 1761 aa1.85□□□□□ -2.11
HMGB1P45-201ENST00000435986 LAMA4Q16363 1823 aa1.84□□□□□ -2.11
HMGB1P45-201ENST00000435986 SCN7AQ01118 1682 aa1.84□□□□□ -2.11
HMGB1P45-201ENST00000435986 FAM208AQ9UK61 1670 aaKnown RBP1.84□□□□□ -2.11
HMGB1P45-201ENST00000435986 ACYP2P14621 99 aa1.84□□□□□ -2.11
HMGB1P45-201ENST00000435986 KRTAP12-1P59990 96 aa1.84□□□□□ -2.11
HMGB1P45-201ENST00000435986 Q96NJ1 140 aa1.84□□□□□ -2.11
HMGB1P45-201ENST00000435986 CCL19Q99731 98 aa1.84□□□□□ -2.11
HMGB1P45-201ENST00000435986 HILPDAQ9Y5L2 63 aa1.84□□□□□ -2.11
HMGB1P45-201ENST00000435986 ABCC6O95255 1503 aa1.84□□□□□ -2.11
HMGB1P45-201ENST00000435986 H3BVH4 76 aa1.83□□□□□ -2.12
HMGB1P45-201ENST00000435986 KRTAP12-4P60329 112 aa1.83□□□□□ -2.12
HMGB1P45-201ENST00000435986 SPRR4Q96PI1 79 aa1.83□□□□□ -2.12
HMGB1P45-201ENST00000435986 A0A1B0GUT8 65 aa1.82□□□□□ -2.12
HMGB1P45-201ENST00000435986 KRTAP21-3Q3LHN1 58 aa1.82□□□□□ -2.12
HMGB1P45-201ENST00000435986 DEFB107AQ8IZN7 70 aa1.82□□□□□ -2.12
HMGB1P45-201ENST00000435986 OBSCN-AS1Q96MR7 158 aa1.82□□□□□ -2.12
HMGB1P45-201ENST00000435986 GNG13Q9P2W3 67 aa1.82□□□□□ -2.12
HMGB1P45-201ENST00000435986 TET1Q8NFU7 2136 aa1.82□□□□□ -2.12
HMGB1P45-201ENST00000435986 LOC285556D6RIA3 1793 aa1.82□□□□□ -2.12
HMGB1P45-201ENST00000435986 ARFGEF2Q9Y6D5 1785 aa1.82□□□□□ -2.12
HMGB1P45-201ENST00000435986 NFAT5O94916 1531 aa1.81□□□□□ -2.12
HMGB1P45-201ENST00000435986 FBN1P35555 2871 aaKnown RBP1.81□□□□□ -2.12
HMGB1P45-201ENST00000435986 SZT2Q5T011 3432 aa1.81□□□□□ -2.12
HMGB1P45-201ENST00000435986 TJP1Q07157 1748 aa1.81□□□□□ -2.12
HMGB1P45-201ENST00000435986 H0Y9P7 68 aa1.81□□□□□ -2.12
HMGB1P45-201ENST00000435986 C3orf79P0CE67 100 aa1.81□□□□□ -2.12
HMGB1P45-201ENST00000435986 PAPPA2Q9BXP8 1791 aa1.8□□□□□ -2.12
HMGB1P45-201ENST00000435986 CENPFP49454 3210 aa1.8□□□□□ -2.12
HMGB1P45-201ENST00000435986 TNRC6BQ9UPQ9 1833 aaKnown RBP1.8□□□□□ -2.12
HMGB1P45-201ENST00000435986 TRBV7-4A0A0J9YYF1 115 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms