RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 PRSS2P07478 247 aa13.22□□□□□ -0.29
GTF3A-203ENST00000435781 NDUFA6P56556 154 aa13.22□□□□□ -0.29
GTF3A-203ENST00000435781 RPL37AP61513 92 aaKnown RBP13.22□□□□□ -0.29
GTF3A-203ENST00000435781 RPL18AQ02543 176 aaKnown RBP13.22□□□□□ -0.29
GTF3A-203ENST00000435781 BAGE3Q86Y29 109 aa13.22□□□□□ -0.29
GTF3A-203ENST00000435781 Q8IZM0 81 aa13.22□□□□□ -0.29
GTF3A-203ENST00000435781 PKHD1L1Q86WI1 4243 aa13.21□□□□□ -0.3
GTF3A-203ENST00000435781 SMIM1B2RUZ4 78 aa13.2□□□□□ -0.3
GTF3A-203ENST00000435781 MYCBP2O75592 4640 aa13.2□□□□□ -0.3
GTF3A-203ENST00000435781 TRBV30A0A0K0K1B3 111 aa13.19□□□□□ -0.3
GTF3A-203ENST00000435781 TLX1NBP0CAT3 122 aa13.19□□□□□ -0.3
GTF3A-203ENST00000435781 IGLC3P0DOY3 106 aa13.19□□□□□ -0.3
GTF3A-203ENST00000435781 C6orf226Q5I0X4 101 aa13.19□□□□□ -0.3
GTF3A-203ENST00000435781 HSBP1O75506 76 aa13.18□□□□□ -0.3
GTF3A-203ENST00000435781 CKS1BP61024 79 aa13.18□□□□□ -0.3
GTF3A-203ENST00000435781 SPINK8P0C7L1 97 aa13.17□□□□□ -0.3
GTF3A-203ENST00000435781 FAM19A2Q8N3H0 131 aa13.17□□□□□ -0.3
GTF3A-203ENST00000435781 LINC00310P59036 64 aa13.16□□□□□ -0.3
GTF3A-203ENST00000435781 Q6ZRP5 223 aa13.16□□□□□ -0.3
GTF3A-203ENST00000435781 H3BRM9 83 aa13.15□□□□□ -0.3
GTF3A-203ENST00000435781 SERF1AO75920 110 aa13.15□□□□□ -0.3
GTF3A-203ENST00000435781 C9orf116Q5BN46 136 aaPredicted RBP13.15□□□□□ -0.3
GTF3A-203ENST00000435781 C7orf33Q8WU49 177 aa13.15□□□□□ -0.3
GTF3A-203ENST00000435781 IFI27L1Q96BM0 104 aa13.15□□□□□ -0.3
GTF3A-203ENST00000435781 A0A1W2PNN7 141 aa13.14□□□□□ -0.31
GTF3A-203ENST00000435781 ZNF22P17026 224 aaPredicted RBP13.14□□□□□ -0.31
GTF3A-203ENST00000435781 COX7B2Q8TF08 81 aa13.14□□□□□ -0.31
GTF3A-203ENST00000435781 CXCL5P42830 114 aa13.13□□□□□ -0.31
GTF3A-203ENST00000435781 DMBT1Q9UGM3 2413 aaPredicted RBP13.13□□□□□ -0.31
GTF3A-203ENST00000435781 C11orf86A6NJI1 115 aa13.12□□□□□ -0.31
GTF3A-203ENST00000435781 NDUFC2-KCTD14E9PQ53 114 aa13.12□□□□□ -0.31
GTF3A-203ENST00000435781 F8VRH5 84 aa13.12□□□□□ -0.31
GTF3A-203ENST00000435781 GAGE2EQ4V326 116 aa13.12□□□□□ -0.31
GTF3A-203ENST00000435781 GAGE2DQ9UEU5 116 aa13.12□□□□□ -0.31
GTF3A-203ENST00000435781 TRAV12-1A0A0B4J245 112 aa13.11□□□□□ -0.31
GTF3A-203ENST00000435781 CHTOPQ9Y3Y2 248 aaKnown RBP13.11□□□□□ -0.31
GTF3A-203ENST00000435781 IGLV5-39A0A0G2JS06 123 aa13.1□□□□□ -0.31
GTF3A-203ENST00000435781 NUPR1O60356 82 aa13.1□□□□□ -0.31
GTF3A-203ENST00000435781 HNRNPA3P51991 378 aaKnown RBP13.09□□□□□ -0.31
GTF3A-203ENST00000435781 FAM168BA1KXE4 195 aa13.07□□□□□ -0.32
GTF3A-203ENST00000435781 TMEM170BQ5T4T1 132 aa13.07□□□□□ -0.32
GTF3A-203ENST00000435781 LEPROTL1O95214 131 aa13.06□□□□□ -0.32
GTF3A-203ENST00000435781 HIST1H2BKO60814 126 aa13.05□□□□□ -0.32
GTF3A-203ENST00000435781 HIST1H2BJP06899 126 aa13.05□□□□□ -0.32
GTF3A-203ENST00000435781 HIST1H2BOP23527 126 aa13.05□□□□□ -0.32
GTF3A-203ENST00000435781 HIST1H2BBP33778 126 aa13.05□□□□□ -0.32
GTF3A-203ENST00000435781 HIST1H2BDP58876 126 aa13.05□□□□□ -0.32
GTF3A-203ENST00000435781 HIST1H2BCP62807 126 aa13.05□□□□□ -0.32
GTF3A-203ENST00000435781 PRR3P79522 188 aaKnown RBP13.05□□□□□ -0.32
GTF3A-203ENST00000435781 HIST2H2BEQ16778 126 aa13.05□□□□□ -0.32
GTF3A-203ENST00000435781 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.05□□□□□ -0.32
GTF3A-203ENST00000435781 C9orf129Q5T035 196 aaKnown RBP13.05□□□□□ -0.32
GTF3A-203ENST00000435781 HIST1H2BHQ93079 126 aa13.05□□□□□ -0.32
GTF3A-203ENST00000435781 HIST1H2BNQ99877 126 aa13.05□□□□□ -0.32
GTF3A-203ENST00000435781 HIST1H2BMQ99879 126 aa13.05□□□□□ -0.32
GTF3A-203ENST00000435781 PHF5AQ7RTV0 110 aaKnown RBP13.04□□□□□ -0.32
GTF3A-203ENST00000435781 FAM19A5Q7Z5A7 132 aaPredicted RBP13.04□□□□□ -0.32
GTF3A-203ENST00000435781 LRP1Q07954 4544 aaKnown RBP13.02□□□□□ -0.32
GTF3A-203ENST00000435781 H0Y8G0 127 aa13.02□□□□□ -0.33
GTF3A-203ENST00000435781 FABP4P15090 132 aa13.02□□□□□ -0.33
GTF3A-203ENST00000435781 ODF1Q14990 250 aa13.02□□□□□ -0.33
GTF3A-203ENST00000435781 KRTAP7-1Q8IUC3 87 aa13.02□□□□□ -0.33
GTF3A-203ENST00000435781 HSPB8Q9UJY1 196 aa13.02□□□□□ -0.33
GTF3A-203ENST00000435781 FAT3Q8TDW7 4589 aa13.01□□□□□ -0.33
GTF3A-203ENST00000435781 XAGE1AQ9HD64 81 aa13.01□□□□□ -0.33
GTF3A-203ENST00000435781 TMEM223A0PJW6 202 aa13□□□□□ -0.33
GTF3A-203ENST00000435781 M0QXV9 152 aa12.98□□□□□ -0.33
GTF3A-203ENST00000435781 KRTAP29-1A8MX34 341 aaPredicted RBP12.97□□□□□ -0.33
GTF3A-203ENST00000435781 S100A1P23297 94 aa12.96□□□□□ -0.33
GTF3A-203ENST00000435781 SERTAD4-AS1Q5TG53 156 aa12.96□□□□□ -0.33
GTF3A-203ENST00000435781 PSORS1C2Q9UIG4 136 aa12.96□□□□□ -0.33
GTF3A-203ENST00000435781 ATP6V1G1O75348 118 aa12.95□□□□□ -0.34
GTF3A-203ENST00000435781 ZNF625Q96I27 306 aaPredicted RBP12.95□□□□□ -0.34
GTF3A-203ENST00000435781 SFTA2Q6UW10 78 aa12.94□□□□□ -0.34
GTF3A-203ENST00000435781 KRTAP11-1Q8IUC1 163 aa12.94□□□□□ -0.34
GTF3A-203ENST00000435781 HERC1Q15751 4861 aa12.94□□□□□ -0.34
GTF3A-203ENST00000435781 OXTP01178 125 aa12.93□□□□□ -0.34
GTF3A-203ENST00000435781 PFN2P35080 140 aa12.93□□□□□ -0.34
GTF3A-203ENST00000435781 ERG28Q9UKR5 140 aa12.93□□□□□ -0.34
GTF3A-203ENST00000435781 J3QL48 77 aa12.92□□□□□ -0.34
GTF3A-203ENST00000435781 PLNP26678 52 aa12.92□□□□□ -0.34
GTF3A-203ENST00000435781 PMCHL2Q9BQD1 86 aa12.92□□□□□ -0.34
GTF3A-203ENST00000435781 MAP1LC3CQ9BXW4 147 aa12.92□□□□□ -0.34
GTF3A-203ENST00000435781 DPM2O94777 84 aa12.91□□□□□ -0.34
GTF3A-203ENST00000435781 COA6Q5JTJ3 125 aaKnown RBP12.91□□□□□ -0.34
GTF3A-203ENST00000435781 C22orf24Q9Y442 160 aa12.91□□□□□ -0.34
GTF3A-203ENST00000435781 UBE2BP63146 152 aa12.9□□□□□ -0.34
GTF3A-203ENST00000435781 C1orf137Q5JT78 98 aa12.9□□□□□ -0.34
GTF3A-203ENST00000435781 COX17Q14061 63 aa12.89□□□□□ -0.35
GTF3A-203ENST00000435781 PLA2G2DQ9UNK4 145 aa12.89□□□□□ -0.35
GTF3A-203ENST00000435781 IGKCP01834 107 aa12.88□□□□□ -0.35
GTF3A-203ENST00000435781 SRSF9Q13242 221 aaKnown RBP eCLIP12.88□□□□□ -0.35
GTF3A-203ENST00000435781 SPINK6Q6UWN8 80 aa12.88□□□□□ -0.35
GTF3A-203ENST00000435781 TP73-AS1Q9UF72 201 aa12.88□□□□□ -0.35
GTF3A-203ENST00000435781 SND1-IT1Q9HBX3 110 aa12.87□□□□□ -0.35
GTF3A-203ENST00000435781 SYS1-DBNDD2H3BUS1 97 aa12.86□□□□□ -0.35
GTF3A-203ENST00000435781 LBHQ53QV2 105 aaPredicted RBP12.86□□□□□ -0.35
GTF3A-203ENST00000435781 LEPROTO15243 131 aa12.85□□□□□ -0.35
GTF3A-203ENST00000435781 TSPEAR-AS2P59090 65 aa12.85□□□□□ -0.35
GTF3A-203ENST00000435781 MRPL55Q7Z7F7 128 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 173.5 ms