RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 SVEP1Q4LDE5 3571 aa5.75□□□□□ -1.49
VTI1A-202ENST00000432306 ATOX1O00244 68 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 HERVK_113P63121 156 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 DAZ2Q13117 558 aaKnown RBP5.74□□□□□ -1.49
VTI1A-202ENST00000432306 C9orf153Q5TBE3 101 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 DAZ4Q86SG3 579 aaKnown RBP5.74□□□□□ -1.49
VTI1A-202ENST00000432306 DEFB104AQ8WTQ1 72 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 OBSCN-AS1Q96MR7 158 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 DAZ3Q9NR90 486 aaKnown RBP5.74□□□□□ -1.49
VTI1A-202ENST00000432306 LINC00527Q9UJ94 153 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 WNK2Q9Y3S1 2297 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 TENM1Q9UKZ4 2725 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 IGHV3OR16-10A0A075B7F0 116 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 C8orf87E5RJ46 101 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 IGHV3-53P01767 116 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 PSMB8P28062 276 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 RPL28P46779 137 aaKnown RBP5.74□□□□□ -1.49
VTI1A-202ENST00000432306 DAD1P61803 113 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 CEMP1Q6PRD7 247 aaPredicted RBP5.74□□□□□ -1.49
VTI1A-202ENST00000432306 ZNF625Q96I27 306 aaPredicted RBP5.74□□□□□ -1.49
VTI1A-202ENST00000432306 BPESC1Q9GZL8 116 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 CDKN2A-AS1Q9UH64 79 aa5.74□□□□□ -1.49
VTI1A-202ENST00000432306 ARHGAP32A7KAX9 2087 aa5.73□□□□□ -1.49
VTI1A-202ENST00000432306 PKD1L1Q8TDX9 2849 aa5.73□□□□□ -1.49
VTI1A-202ENST00000432306 IGHV3-11P01762 117 aa5.73□□□□□ -1.49
VTI1A-202ENST00000432306 SLURP1P55000 103 aa5.73□□□□□ -1.49
VTI1A-202ENST00000432306 XP32Q5T750 250 aa5.73□□□□□ -1.49
VTI1A-202ENST00000432306 TRAV12-2A0A075B6T6 113 aa5.72□□□□□ -1.49
VTI1A-202ENST00000432306 IGHV3OR16-9A0A0B4J2B5 98 aa5.72□□□□□ -1.49
VTI1A-202ENST00000432306 LINC00694P0DN24 101 aa5.72□□□□□ -1.49
VTI1A-202ENST00000432306 SPINK13Q1W4C9 94 aa5.72□□□□□ -1.49
VTI1A-202ENST00000432306 SOSTDC1Q6X4U4 206 aa5.72□□□□□ -1.49
VTI1A-202ENST00000432306 FAM218AQ96MZ4 157 aa5.72□□□□□ -1.49
VTI1A-202ENST00000432306 NOTCH1P46531 2555 aa5.72□□□□□ -1.49
VTI1A-202ENST00000432306 IGKV3-7A0A075B6H7 116 aa5.71□□□□□ -1.49
VTI1A-202ENST00000432306 IGHV3OR16-12A0A075B7B8 117 aa5.71□□□□□ -1.49
VTI1A-202ENST00000432306 RBMY1BA6NDE4 496 aaKnown RBP5.71□□□□□ -1.49
VTI1A-202ENST00000432306 RBMY1EA6NEQ0 496 aaKnown RBP5.71□□□□□ -1.49
VTI1A-202ENST00000432306 SMIM1B2RUZ4 78 aa5.71□□□□□ -1.49
VTI1A-202ENST00000432306 H0Y9J4 135 aa5.71□□□□□ -1.49
VTI1A-202ENST00000432306 RBMY1DP0C7P1 496 aaKnown RBP5.71□□□□□ -1.49
VTI1A-202ENST00000432306 BAALC-AS2P0C853 105 aa5.71□□□□□ -1.49
VTI1A-202ENST00000432306 RBMY1A1P0DJD3 496 aaKnown RBP5.71□□□□□ -1.49
VTI1A-202ENST00000432306 RBMY1FQ15415 496 aaKnown RBP5.71□□□□□ -1.49
VTI1A-202ENST00000432306 Q8N2B8 174 aa5.71□□□□□ -1.49
VTI1A-202ENST00000432306 TRAV13-2A0A0B4J235 113 aa5.71□□□□□ -1.5
VTI1A-202ENST00000432306 PLAC8L1A1L4L8 177 aa5.71□□□□□ -1.5
VTI1A-202ENST00000432306 Q6JHZ5 121 aa5.71□□□□□ -1.5
VTI1A-202ENST00000432306 NOTCH2NLQ7Z3S9 236 aa5.71□□□□□ -1.5
VTI1A-202ENST00000432306 LAMTOR3Q9UHA4 124 aa5.71□□□□□ -1.5
VTI1A-202ENST00000432306 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
VTI1A-202ENST00000432306 TMEM258P61165 79 aa5.7□□□□□ -1.5
VTI1A-202ENST00000432306 C11orf72Q8NBR9 251 aa5.7□□□□□ -1.5
VTI1A-202ENST00000432306 IGHV4-61A0A0C4DH41 118 aa5.69□□□□□ -1.5
VTI1A-202ENST00000432306 KNCNA6PVL3 124 aa5.69□□□□□ -1.5
VTI1A-202ENST00000432306 NDUFS5O43920 106 aa5.69□□□□□ -1.5
VTI1A-202ENST00000432306 BLCAPP62952 87 aa5.69□□□□□ -1.5
VTI1A-202ENST00000432306 PRR3P79522 188 aaKnown RBP5.69□□□□□ -1.5
VTI1A-202ENST00000432306 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.68□□□□□ -1.5
VTI1A-202ENST00000432306 IGKV2-29A2NJV5 120 aaPredicted RBP5.68□□□□□ -1.5
VTI1A-202ENST00000432306 H0YGX0 51 aa5.68□□□□□ -1.5
VTI1A-202ENST00000432306 H3BUX3 64 aa5.68□□□□□ -1.5
VTI1A-202ENST00000432306 PROK1P58294 105 aa5.68□□□□□ -1.5
VTI1A-202ENST00000432306 NPC2P61916 151 aa5.68□□□□□ -1.5
VTI1A-202ENST00000432306 COX6A2Q02221 97 aa5.68□□□□□ -1.5
VTI1A-202ENST00000432306 RNASE13Q5GAN3 156 aaKnown RBP5.68□□□□□ -1.5
VTI1A-202ENST00000432306 UPK3BQ9BT76 320 aa5.68□□□□□ -1.5
VTI1A-202ENST00000432306 TRBV10-1A0A0K0K1A3 114 aa5.68□□□□□ -1.5
VTI1A-202ENST00000432306 Q6ZSN1 163 aa5.68□□□□□ -1.5
VTI1A-202ENST00000432306 KLK5Q9Y337 293 aaPredicted RBP5.68□□□□□ -1.5
VTI1A-202ENST00000432306 IGHV4-59P01825 116 aa5.67□□□□□ -1.5
VTI1A-202ENST00000432306 BRD3OSQ6XYD6 125 aa5.67□□□□□ -1.5
VTI1A-202ENST00000432306 SERP2Q8N6R1 65 aa5.67□□□□□ -1.5
VTI1A-202ENST00000432306 XCL2Q9UBD3 114 aa5.67□□□□□ -1.5
VTI1A-202ENST00000432306 IGHV4-38-2P0DP08 117 aa5.66□□□□□ -1.5
VTI1A-202ENST00000432306 CHCHD10Q8WYQ3 142 aaPredicted RBP5.66□□□□□ -1.5
VTI1A-202ENST00000432306 TRRAPQ9Y4A5 3859 aa5.66□□□□□ -1.5
VTI1A-202ENST00000432306 NDUFC2-KCTD14E9PQ53 114 aa5.65□□□□□ -1.5
VTI1A-202ENST00000432306 PAX4O43316 350 aa5.65□□□□□ -1.5
VTI1A-202ENST00000432306 IGKV3-20P01619 116 aa5.65□□□□□ -1.5
VTI1A-202ENST00000432306 LY6EQ16553 131 aa5.65□□□□□ -1.5
VTI1A-202ENST00000432306 ATP5EP2Q5VTU8 51 aa5.65□□□□□ -1.5
VTI1A-202ENST00000432306 Q6ZRU5 148 aa5.65□□□□□ -1.5
VTI1A-202ENST00000432306 WNK1Q9H4A3 2382 aa5.65□□□□□ -1.5
VTI1A-202ENST00000432306 CDC42SE2Q9NRR3 84 aa5.65□□□□□ -1.5
VTI1A-202ENST00000432306 IGKV2-28A0A075B6P5 120 aa5.65□□□□□ -1.51
VTI1A-202ENST00000432306 IGHV3-73A0A0B4J1V6 119 aa5.65□□□□□ -1.51
VTI1A-202ENST00000432306 B4DSR2 109 aa5.65□□□□□ -1.51
VTI1A-202ENST00000432306 DNAL4O96015 105 aa5.65□□□□□ -1.51
VTI1A-202ENST00000432306 IGKV2D-28P01615 120 aa5.65□□□□□ -1.51
VTI1A-202ENST00000432306 CRPP02741 224 aa5.65□□□□□ -1.51
VTI1A-202ENST00000432306 LYPD5Q6UWN5 251 aa5.65□□□□□ -1.51
VTI1A-202ENST00000432306 HRCT1Q6UXD1 115 aa5.65□□□□□ -1.51
VTI1A-202ENST00000432306 LINC00337Q8N6G1 96 aa5.65□□□□□ -1.51
VTI1A-202ENST00000432306 LINC00167Q96N53 147 aa5.65□□□□□ -1.51
VTI1A-202ENST00000432306 TRBV10-3A0A0K0K1G6 114 aa5.64□□□□□ -1.51
VTI1A-202ENST00000432306 LOC107984640A0A0U1RRK4 108 aa5.64□□□□□ -1.51
VTI1A-202ENST00000432306 BCE1O60756 84 aa5.64□□□□□ -1.51
VTI1A-202ENST00000432306 C6orf223Q8N319 242 aa5.64□□□□□ -1.51
VTI1A-202ENST00000432306 DPH3Q96FX2 82 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms