RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 Q9UF83 564 aa6.19□□□□□ -1.42
GABPB1-205ENST00000429662 TRAV13-2A0A0B4J235 113 aa6.18□□□□□ -1.42
GABPB1-205ENST00000429662 PRM2P04554 102 aa6.18□□□□□ -1.42
GABPB1-205ENST00000429662 MEIG1Q5JSS6 88 aa6.18□□□□□ -1.42
GABPB1-205ENST00000429662 ZNF625Q96I27 306 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-205ENST00000429662 ANAPC13Q9BS18 74 aa6.18□□□□□ -1.42
GABPB1-205ENST00000429662 C16orf95Q9H693 158 aa6.18□□□□□ -1.42
GABPB1-205ENST00000429662 TEX49A0A1B0GTD5 131 aa6.18□□□□□ -1.42
GABPB1-205ENST00000429662 A8MZ25 164 aa6.18□□□□□ -1.42
GABPB1-205ENST00000429662 F5H768 121 aa6.18□□□□□ -1.42
GABPB1-205ENST00000429662 TTC32Q5I0X7 151 aa6.18□□□□□ -1.42
GABPB1-205ENST00000429662 LCE4AQ5TA78 99 aa6.18□□□□□ -1.42
GABPB1-205ENST00000429662 NTM-AS1Q6ZSK4 140 aa6.18□□□□□ -1.42
GABPB1-205ENST00000429662 CITED2Q99967 270 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-205ENST00000429662 DNAH7Q8WXX0 4024 aa6.17□□□□□ -1.42
GABPB1-205ENST00000429662 TRAV13-1A0A0B4J241 112 aa6.17□□□□□ -1.42
GABPB1-205ENST00000429662 GAGE12JA6NER3 117 aa6.17□□□□□ -1.42
GABPB1-205ENST00000429662 DNAJC9-AS1A6NH13 148 aa6.17□□□□□ -1.42
GABPB1-205ENST00000429662 NPC2P61916 151 aa6.17□□□□□ -1.42
GABPB1-205ENST00000429662 GAGE4Q13068 117 aa6.17□□□□□ -1.42
GABPB1-205ENST00000429662 GAGE5Q13069 117 aa6.17□□□□□ -1.42
GABPB1-205ENST00000429662 Q6ZTI0 123 aa6.17□□□□□ -1.42
GABPB1-205ENST00000429662 C15orf53Q8NAA6 179 aa6.17□□□□□ -1.42
GABPB1-205ENST00000429662 CLEC2BQ92478 149 aa6.17□□□□□ -1.42
GABPB1-205ENST00000429662 NOTCH3Q9UM47 2321 aa6.16□□□□□ -1.42
GABPB1-205ENST00000429662 TRAV26-1A0A087WT03 109 aa6.16□□□□□ -1.42
GABPB1-205ENST00000429662 LINC00694P0DN24 101 aa6.16□□□□□ -1.42
GABPB1-205ENST00000429662 GAGE6Q13070 117 aa6.16□□□□□ -1.42
GABPB1-205ENST00000429662 IMUPQ9GZP8 106 aa6.16□□□□□ -1.42
GABPB1-205ENST00000429662 NOP10Q9NPE3 64 aaKnown RBP6.16□□□□□ -1.42
GABPB1-205ENST00000429662 TRGV2A0A075B6R0 118 aa6.15□□□□□ -1.43
GABPB1-205ENST00000429662 RPL28P46779 137 aaKnown RBP6.15□□□□□ -1.43
GABPB1-205ENST00000429662 NDUFV3P56181 108 aaKnown RBP6.15□□□□□ -1.43
GABPB1-205ENST00000429662 COX7B2Q8TF08 81 aa6.15□□□□□ -1.43
GABPB1-205ENST00000429662 STAB2Q8WWQ8 2551 aa6.14□□□□□ -1.43
GABPB1-205ENST00000429662 TRGV4A0A0C4DH28 118 aa6.14□□□□□ -1.43
GABPB1-205ENST00000429662 H0YGX0 51 aa6.14□□□□□ -1.43
GABPB1-205ENST00000429662 IGLV1-51P01701 117 aa6.14□□□□□ -1.43
GABPB1-205ENST00000429662 RNASE1P07998 156 aaKnown RBP6.14□□□□□ -1.43
GABPB1-205ENST00000429662 INAFM2P0DMQ5 153 aa6.14□□□□□ -1.43
GABPB1-205ENST00000429662 LINC01561Q8N1V8 128 aa6.14□□□□□ -1.43
GABPB1-205ENST00000429662 DAND5Q8N907 189 aa6.14□□□□□ -1.43
GABPB1-205ENST00000429662 NACAE9PAV3 2078 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 TRBV7-7A0A0K0K1E9 115 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 PLAC8L1A1L4L8 177 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 IBA57-AS1B1ANH7 110 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 GAGE7O76087 117 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 CRPP02741 224 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 GAGE12FP0CL80 117 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 GAGE12GP0CL81 117 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 GAGE12IP0CL82 117 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 KRTAP10-3P60369 221 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 KPRPQ5T749 579 aaPredicted RBP6.13□□□□□ -1.43
GABPB1-205ENST00000429662 SOSTDC1Q6X4U4 206 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 KRTAP4-2Q9BYR5 136 aa6.13□□□□□ -1.43
GABPB1-205ENST00000429662 FRAS1Q86XX4 4008 aa6.12□□□□□ -1.43
GABPB1-205ENST00000429662 TRBV6-8A0A0A6YYG3 113 aa6.12□□□□□ -1.43
GABPB1-205ENST00000429662 A0A1W2PRX2 142 aa6.12□□□□□ -1.43
GABPB1-205ENST00000429662 GIG44P09565 113 aaPredicted RBP6.12□□□□□ -1.43
GABPB1-205ENST00000429662 BAALC-AS2P0C853 105 aa6.12□□□□□ -1.43
GABPB1-205ENST00000429662 CSNK1G2-AS1Q8NCQ2 148 aa6.12□□□□□ -1.43
GABPB1-205ENST00000429662 KIR2DL5BQ8NHK3 375 aa6.12□□□□□ -1.43
GABPB1-205ENST00000429662 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.12□□□□□ -1.43
GABPB1-205ENST00000429662 A0A087WZ39 114 aa6.11□□□□□ -1.43
GABPB1-205ENST00000429662 NDUFA7O95182 113 aa6.11□□□□□ -1.43
GABPB1-205ENST00000429662 FHL2Q14192 279 aa6.11□□□□□ -1.43
GABPB1-205ENST00000429662 LINC00643Q86TS7 51 aa6.11□□□□□ -1.43
GABPB1-205ENST00000429662 C11orf44Q8N8P7 122 aa6.11□□□□□ -1.43
GABPB1-205ENST00000429662 LINC01006Q8NI28 216 aa6.11□□□□□ -1.43
GABPB1-205ENST00000429662 C19orf73Q9NVV2 129 aa6.11□□□□□ -1.43
GABPB1-205ENST00000429662 STARD9Q9P2P6 4700 aa6.11□□□□□ -1.43
GABPB1-205ENST00000429662 A0A0U1RRA0 63 aa6.1□□□□□ -1.43
GABPB1-205ENST00000429662 SMIM9A6NGZ8 99 aa6.1□□□□□ -1.43
GABPB1-205ENST00000429662 PRB2P02812 416 aaPredicted RBP6.1□□□□□ -1.43
GABPB1-205ENST00000429662 CHCHD5Q9BSY4 110 aa6.1□□□□□ -1.43
GABPB1-205ENST00000429662 SND1-IT1Q9HBX3 110 aa6.1□□□□□ -1.43
GABPB1-205ENST00000429662 IGHV3OR16-9A0A0B4J2B5 98 aa6.09□□□□□ -1.43
GABPB1-205ENST00000429662 A0A1B0GUV1 79 aa6.09□□□□□ -1.43
GABPB1-205ENST00000429662 DNAL4O96015 105 aa6.09□□□□□ -1.43
GABPB1-205ENST00000429662 ATP5G1P05496 136 aa6.09□□□□□ -1.43
GABPB1-205ENST00000429662 NHLRC4P0CG21 123 aaPredicted RBP6.09□□□□□ -1.43
GABPB1-205ENST00000429662 RPL35AP18077 110 aaKnown RBP6.09□□□□□ -1.43
GABPB1-205ENST00000429662 CXCL5P42830 114 aa6.09□□□□□ -1.43
GABPB1-205ENST00000429662 LINC00158P58513 81 aa6.09□□□□□ -1.43
GABPB1-205ENST00000429662 MIR7-3HGQ8N6C7 128 aa6.09□□□□□ -1.43
GABPB1-205ENST00000429662 LINC00612Q8N6U2 182 aa6.09□□□□□ -1.43
GABPB1-205ENST00000429662 MALP21145 153 aa6.08□□□□□ -1.44
GABPB1-205ENST00000429662 SS18Q15532 418 aa6.08□□□□□ -1.44
GABPB1-205ENST00000429662 SDIM1Q6ZPB5 146 aa6.08□□□□□ -1.44
GABPB1-205ENST00000429662 A0A1B0GX51 115 aa6.07□□□□□ -1.44
GABPB1-205ENST00000429662 TOMM7Q9P0U1 55 aa6.07□□□□□ -1.44
GABPB1-205ENST00000429662 HUWE1Q7Z6Z7 4374 aaKnown RBP6.07□□□□□ -1.44
GABPB1-205ENST00000429662 IGLV4-60A0A075B6I1 120 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 LOC100131303A0A0U1RQF7 123 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 LINC00959A0A1B0GUT2 108 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 CCL18P55774 89 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 Q8IZM0 81 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 SORL1Q92673 2214 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 IGKV2-28A0A075B6P5 120 aa6.06□□□□□ -1.44
GABPB1-205ENST00000429662 IGKV2D-28P01615 120 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms