RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 LYPD5Q6UWN5 251 aa9.38□□□□□ -0.91
SPG11-202ENST00000427534 SPACA4Q8TDM5 124 aa9.38□□□□□ -0.91
SPG11-202ENST00000427534 WDR87Q6ZQQ6 2873 aa9.37□□□□□ -0.91
SPG11-202ENST00000427534 PRYO14603 147 aa9.37□□□□□ -0.91
SPG11-202ENST00000427534 LINC00242Q5T6M2 205 aa9.37□□□□□ -0.91
SPG11-202ENST00000427534 C2orf48Q96LS8 159 aa9.37□□□□□ -0.91
SPG11-202ENST00000427534 LRP4O75096 1905 aa9.36□□□□□ -0.91
SPG11-202ENST00000427534 LST1O00453 97 aa9.36□□□□□ -0.91
SPG11-202ENST00000427534 CPAMD8Q8IZJ3 1885 aa9.36□□□□□ -0.91
SPG11-202ENST00000427534 LINC00310P59036 64 aa9.36□□□□□ -0.91
SPG11-202ENST00000427534 FAM19A3Q7Z5A8 133 aa9.36□□□□□ -0.91
SPG11-202ENST00000427534 PRR15LQ9BU68 103 aa9.36□□□□□ -0.91
SPG11-202ENST00000427534 CHCHD7Q9BUK0 85 aa9.36□□□□□ -0.91
SPG11-202ENST00000427534 FHL3Q13643 280 aa9.36□□□□□ -0.91
SPG11-202ENST00000427534 Q8IZM0 81 aa9.35□□□□□ -0.91
SPG11-202ENST00000427534 SERP2Q8N6R1 65 aa9.35□□□□□ -0.91
SPG11-202ENST00000427534 LINC01547P58512 204 aaPredicted RBP9.35□□□□□ -0.91
SPG11-202ENST00000427534 URB1-AS1Q96HZ7 61 aa9.35□□□□□ -0.91
SPG11-202ENST00000427534 LINC00337Q8N6G1 96 aa9.35□□□□□ -0.91
SPG11-202ENST00000427534 Q9UF83 564 aa9.35□□□□□ -0.91
SPG11-202ENST00000427534 MRPL55Q7Z7F7 128 aaKnown RBP9.35□□□□□ -0.91
SPG11-202ENST00000427534 Q6ZRU5 148 aa9.34□□□□□ -0.91
SPG11-202ENST00000427534 IGIPA6NJ69 53 aa9.34□□□□□ -0.91
SPG11-202ENST00000427534 LINC00208Q96KT6 92 aa9.34□□□□□ -0.91
SPG11-202ENST00000427534 CENPFP49454 3210 aa9.34□□□□□ -0.92
SPG11-202ENST00000427534 Q8N3U1 123 aa9.33□□□□□ -0.92
SPG11-202ENST00000427534 A0A087WVE0 104 aa9.33□□□□□ -0.92
SPG11-202ENST00000427534 PIEZO1Q92508 2521 aa9.33□□□□□ -0.92
SPG11-202ENST00000427534 A0A087WSZ3 146 aa9.33□□□□□ -0.92
SPG11-202ENST00000427534 TSPEAR-AS2P59090 65 aa9.33□□□□□ -0.92
SPG11-202ENST00000427534 IGKV2D-30A0A075B6S6 120 aa9.32□□□□□ -0.92
SPG11-202ENST00000427534 IGKV2-30P06310 120 aa9.32□□□□□ -0.92
SPG11-202ENST00000427534 SOSTDC1Q6X4U4 206 aa9.32□□□□□ -0.92
SPG11-202ENST00000427534 COX17Q14061 63 aa9.31□□□□□ -0.92
SPG11-202ENST00000427534 BEAN1Q3B7T3 259 aa9.31□□□□□ -0.92
SPG11-202ENST00000427534 SMIM1B2RUZ4 78 aa9.31□□□□□ -0.92
SPG11-202ENST00000427534 ADAMTSL4-AS1Q5T5F5 129 aa9.31□□□□□ -0.92
SPG11-202ENST00000427534 C16orf95Q9H693 158 aa9.31□□□□□ -0.92
SPG11-202ENST00000427534 ATP5EP2Q5VTU8 51 aa9.31□□□□□ -0.92
SPG11-202ENST00000427534 TRBV7-6A0A0J9YX20 115 aa9.3□□□□□ -0.92
SPG11-202ENST00000427534 KRTAP24-1Q3LI83 254 aa9.29□□□□□ -0.92
SPG11-202ENST00000427534 Q8N814 137 aa9.29□□□□□ -0.92
SPG11-202ENST00000427534 NDUFC2-KCTD14E9PQ53 114 aa9.29□□□□□ -0.92
SPG11-202ENST00000427534 COX8CQ7Z4L0 72 aa9.28□□□□□ -0.92
SPG11-202ENST00000427534 LINC00575Q6W349 94 aa9.28□□□□□ -0.92
SPG11-202ENST00000427534 PLA2G1BP04054 148 aaKnown RBP9.28□□□□□ -0.92
SPG11-202ENST00000427534 CCDC179H3BU77 68 aa9.27□□□□□ -0.92
SPG11-202ENST00000427534 EGFEM1PQ0D2K5 195 aa9.27□□□□□ -0.93
SPG11-202ENST00000427534 C16orf90A8MZG2 172 aa9.26□□□□□ -0.93
SPG11-202ENST00000427534 NTM-AS1Q6ZSK4 140 aa9.26□□□□□ -0.93
SPG11-202ENST00000427534 DOPEY1Q5JWR5 2465 aa9.26□□□□□ -0.93
SPG11-202ENST00000427534 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.26□□□□□ -0.93
SPG11-202ENST00000427534 MOBPQ13875 183 aa9.26□□□□□ -0.93
SPG11-202ENST00000427534 C22orf24Q9Y442 160 aa9.26□□□□□ -0.93
SPG11-202ENST00000427534 UQCRQO14949 82 aa9.25□□□□□ -0.93
SPG11-202ENST00000427534 PHF5AQ7RTV0 110 aaKnown RBP9.25□□□□□ -0.93
SPG11-202ENST00000427534 MYO18BQ8IUG5 2567 aa9.25□□□□□ -0.93
SPG11-202ENST00000427534 SMCR5Q8TEV8 140 aa9.24□□□□□ -0.93
SPG11-202ENST00000427534 HCG22E2RYF7 251 aa9.24□□□□□ -0.93
SPG11-202ENST00000427534 TLN1Q9Y490 2541 aaKnown RBP9.23□□□□□ -0.93
SPG11-202ENST00000427534 FAM240AA0A1B0GVK7 77 aa9.23□□□□□ -0.93
SPG11-202ENST00000427534 MUC7Q8TAX7 377 aa9.23□□□□□ -0.93
SPG11-202ENST00000427534 C2CD3Q4AC94 2353 aa9.22□□□□□ -0.93
SPG11-202ENST00000427534 J3QL48 77 aa9.22□□□□□ -0.93
SPG11-202ENST00000427534 CRYGAP11844 174 aa9.22□□□□□ -0.93
SPG11-202ENST00000427534 PSPHP1O15172 72 aa9.21□□□□□ -0.93
SPG11-202ENST00000427534 A0A096LNJ9 63 aa9.21□□□□□ -0.93
SPG11-202ENST00000427534 C7orf65Q6ZTY9 151 aa9.21□□□□□ -0.94
SPG11-202ENST00000427534 AMELXQ99217 191 aa9.2□□□□□ -0.94
SPG11-202ENST00000427534 H0Y9P7 68 aa9.19□□□□□ -0.94
SPG11-202ENST00000427534 FAM229AH3BQW9 127 aa9.19□□□□□ -0.94
SPG11-202ENST00000427534 LINC00315P59091 139 aa9.19□□□□□ -0.94
SPG11-202ENST00000427534 NHLRC4P0CG21 123 aaPredicted RBP9.18□□□□□ -0.94
SPG11-202ENST00000427534 RTL8CO15255 209 aa9.18□□□□□ -0.94
SPG11-202ENST00000427534 CSDC2Q9Y534 153 aaKnown RBP9.18□□□□□ -0.94
SPG11-202ENST00000427534 IMUPQ9GZP8 106 aa9.17□□□□□ -0.94
SPG11-202ENST00000427534 IGLV8-61A0A075B6I0 122 aa9.17□□□□□ -0.94
SPG11-202ENST00000427534 KIAA0087Q14695 138 aa9.16□□□□□ -0.94
SPG11-202ENST00000427534 MYO9AB2RTY4 2548 aa9.15□□□□□ -0.94
SPG11-202ENST00000427534 SMR3BP02814 79 aaPredicted RBP9.15□□□□□ -0.95
SPG11-202ENST00000427534 COL27A1Q8IZC6 1860 aaPredicted RBP9.13□□□□□ -0.95
SPG11-202ENST00000427534 JMJD1CQ15652 2540 aa9.13□□□□□ -0.95
SPG11-202ENST00000427534 LRRK2Q5S007 2527 aa9.13□□□□□ -0.95
SPG11-202ENST00000427534 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
SPG11-202ENST00000427534 TYMSOSQ8TAI1 123 aa9.12□□□□□ -0.95
SPG11-202ENST00000427534 LINC00167Q96N53 147 aa9.12□□□□□ -0.95
SPG11-202ENST00000427534 Q6JHZ5 121 aa9.12□□□□□ -0.95
SPG11-202ENST00000427534 LIMD2Q9BT23 127 aa9.12□□□□□ -0.95
SPG11-202ENST00000427534 KIF25-AS1Q9Y6Z4 181 aa9.11□□□□□ -0.95
SPG11-202ENST00000427534 A0A1B0GUV1 79 aa9.1□□□□□ -0.95
SPG11-202ENST00000427534 FAM168BA1KXE4 195 aa9.1□□□□□ -0.95
SPG11-202ENST00000427534 Q8N2B8 174 aa9.09□□□□□ -0.95
SPG11-202ENST00000427534 ST20-AS1Q8NBB2 130 aa9.09□□□□□ -0.95
SPG11-202ENST00000427534 C6orf48Q9UBA6 75 aa9.09□□□□□ -0.95
SPG11-202ENST00000427534 SMIM29Q86T20 159 aa9.08□□□□□ -0.96
SPG11-202ENST00000427534 SERTAD4-AS1Q5TG53 156 aa9.08□□□□□ -0.96
SPG11-202ENST00000427534 CEP295Q9C0D2 2601 aa9.08□□□□□ -0.96
SPG11-202ENST00000427534 DNAH10OSP0CZ25 163 aa9.08□□□□□ -0.96
SPG11-202ENST00000427534 COX7CP15954 63 aa9.08□□□□□ -0.96
SPG11-202ENST00000427534 C11orf72Q8NBR9 251 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms