RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 IGKV2D-28P01615 120 aa9.98□□□□□ -0.81
LIG1-202ENST00000427526 C22orf24Q9Y442 160 aa9.98□□□□□ -0.81
LIG1-202ENST00000427526 TRAV13-2A0A0B4J235 113 aa9.97□□□□□ -0.81
LIG1-202ENST00000427526 RPL28P46779 137 aaKnown RBP9.97□□□□□ -0.81
LIG1-202ENST00000427526 FAM222AQ5U5X8 452 aa9.97□□□□□ -0.81
LIG1-202ENST00000427526 IGKV3OR2-268A0A0C4DH90 116 aa9.97□□□□□ -0.81
LIG1-202ENST00000427526 LINC00337Q8N6G1 96 aa9.97□□□□□ -0.81
LIG1-202ENST00000427526 A0A087WZ39 114 aa9.96□□□□□ -0.81
LIG1-202ENST00000427526 C3orf22Q8N5N4 141 aa9.96□□□□□ -0.81
LIG1-202ENST00000427526 KIR2DL5BQ8NHK3 375 aa9.96□□□□□ -0.81
LIG1-202ENST00000427526 TOMM7Q9P0U1 55 aa9.96□□□□□ -0.82
LIG1-202ENST00000427526 ATRQ13535 2644 aa9.96□□□□□ -0.82
LIG1-202ENST00000427526 RPS28P62857 69 aaKnown RBP9.96□□□□□ -0.82
LIG1-202ENST00000427526 SND1-IT1Q9HBX3 110 aa9.96□□□□□ -0.82
LIG1-202ENST00000427526 BAALC-AS2P0C853 105 aa9.95□□□□□ -0.82
LIG1-202ENST00000427526 F8WDY8 70 aa9.94□□□□□ -0.82
LIG1-202ENST00000427526 LINC00612Q8N6U2 182 aa9.94□□□□□ -0.82
LIG1-202ENST00000427526 CRPP02741 224 aa9.94□□□□□ -0.82
LIG1-202ENST00000427526 ACYP1P07311 99 aa9.94□□□□□ -0.82
LIG1-202ENST00000427526 F8P00451 2351 aa9.94□□□□□ -0.82
LIG1-202ENST00000427526 IBA57-AS1B1ANH7 110 aa9.93□□□□□ -0.82
LIG1-202ENST00000427526 LINC00158P58513 81 aa9.93□□□□□ -0.82
LIG1-202ENST00000427526 LINC00959A0A1B0GUT2 108 aa9.93□□□□□ -0.82
LIG1-202ENST00000427526 CCL18P55774 89 aa9.93□□□□□ -0.82
LIG1-202ENST00000427526 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
LIG1-202ENST00000427526 MRAPQ8TCY5 172 aa9.93□□□□□ -0.82
LIG1-202ENST00000427526 TRBV7-7A0A0K0K1E9 115 aa9.92□□□□□ -0.82
LIG1-202ENST00000427526 DEFB130BP0DP73 79 aa9.92□□□□□ -0.82
LIG1-202ENST00000427526 DEFB130AP0DP74 79 aa9.92□□□□□ -0.82
LIG1-202ENST00000427526 FAM236AA0A1B0GUQ0 79 aa9.92□□□□□ -0.82
LIG1-202ENST00000427526 FAM236BA0A1B0GV22 79 aa9.92□□□□□ -0.82
LIG1-202ENST00000427526 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
LIG1-202ENST00000427526 TEP1Q99973 2627 aaKnown RBP9.91□□□□□ -0.82
LIG1-202ENST00000427526 UQCRQO14949 82 aa9.91□□□□□ -0.82
LIG1-202ENST00000427526 C4orf26Q17RF5 130 aa9.91□□□□□ -0.82
LIG1-202ENST00000427526 C9orf66Q5T8R8 295 aa9.91□□□□□ -0.82
LIG1-202ENST00000427526 SMIM11BQ8TCY0 68 aa9.91□□□□□ -0.82
LIG1-202ENST00000427526 SDIM1Q6ZPB5 146 aa9.9□□□□□ -0.82
LIG1-202ENST00000427526 Q9HAA7 133 aa9.9□□□□□ -0.82
LIG1-202ENST00000427526 A0A1B0GUV1 79 aa9.89□□□□□ -0.83
LIG1-202ENST00000427526 GYPEP15421 78 aa9.89□□□□□ -0.83
LIG1-202ENST00000427526 NBEAL2Q6ZNJ1 2754 aa9.89□□□□□ -0.83
LIG1-202ENST00000427526 PFN2P35080 140 aa9.89□□□□□ -0.83
LIG1-202ENST00000427526 HRCT1Q6UXD1 115 aa9.89□□□□□ -0.83
LIG1-202ENST00000427526 SMCR5Q8TEV8 140 aa9.89□□□□□ -0.83
LIG1-202ENST00000427526 X6R8D5 127 aa9.89□□□□□ -0.83
LIG1-202ENST00000427526 MALP21145 153 aa9.88□□□□□ -0.83
LIG1-202ENST00000427526 TRRAPQ9Y4A5 3859 aa9.88□□□□□ -0.83
LIG1-202ENST00000427526 A0A087WYN8 130 aa9.88□□□□□ -0.83
LIG1-202ENST00000427526 C6orf226Q5I0X4 101 aa9.87□□□□□ -0.83
LIG1-202ENST00000427526 H0YGX0 51 aa9.86□□□□□ -0.83
LIG1-202ENST00000427526 XCL1P47992 114 aa9.86□□□□□ -0.83
LIG1-202ENST00000427526 GAGE2AQ6NT46 116 aa9.86□□□□□ -0.83
LIG1-202ENST00000427526 IMUPQ9GZP8 106 aa9.86□□□□□ -0.83
LIG1-202ENST00000427526 SS18Q15532 418 aa9.85□□□□□ -0.83
LIG1-202ENST00000427526 PRO0255Q9UI72 69 aa9.85□□□□□ -0.83
LIG1-202ENST00000427526 INAFM2P0DMQ5 153 aa9.85□□□□□ -0.83
LIG1-202ENST00000427526 Q8IZM0 81 aa9.85□□□□□ -0.83
LIG1-202ENST00000427526 OXTP01178 125 aa9.85□□□□□ -0.83
LIG1-202ENST00000427526 Q5XG85 94 aa9.85□□□□□ -0.83
LIG1-202ENST00000427526 LINC00643Q86TS7 51 aa9.85□□□□□ -0.83
LIG1-202ENST00000427526 PAX4O43316 350 aa9.84□□□□□ -0.83
LIG1-202ENST00000427526 LINC01561Q8N1V8 128 aa9.84□□□□□ -0.83
LIG1-202ENST00000427526 C11orf68Q9H3H3 251 aaKnown RBP9.83□□□□□ -0.84
LIG1-202ENST00000427526 C9orf129Q5T035 196 aaKnown RBP9.83□□□□□ -0.84
LIG1-202ENST00000427526 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
LIG1-202ENST00000427526 DNAL4O96015 105 aa9.82□□□□□ -0.84
LIG1-202ENST00000427526 OBSCN-AS1Q96MR7 158 aa9.82□□□□□ -0.84
LIG1-202ENST00000427526 ATP5G1P05496 136 aa9.82□□□□□ -0.84
LIG1-202ENST00000427526 WFDC9Q8NEX5 89 aa9.82□□□□□ -0.84
LIG1-202ENST00000427526 A0A096LPF7 62 aa9.82□□□□□ -0.84
LIG1-202ENST00000427526 DEFB135Q30KP9 77 aa9.82□□□□□ -0.84
LIG1-202ENST00000427526 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
LIG1-202ENST00000427526 CRYGAP11844 174 aa9.81□□□□□ -0.84
LIG1-202ENST00000427526 COX7CP15954 63 aa9.81□□□□□ -0.84
LIG1-202ENST00000427526 DEFB4AO15263 64 aa9.81□□□□□ -0.84
LIG1-202ENST00000427526 LYRM9A8MSI8 78 aa9.8□□□□□ -0.84
LIG1-202ENST00000427526 LECT2O14960 151 aa9.8□□□□□ -0.84
LIG1-202ENST00000427526 KIAA0087Q14695 138 aa9.8□□□□□ -0.84
LIG1-202ENST00000427526 C2orf48Q96LS8 159 aa9.8□□□□□ -0.84
LIG1-202ENST00000427526 CYSTM1Q9H1C7 97 aa9.8□□□□□ -0.84
LIG1-202ENST00000427526 hADV29S1A0JD25 119 aa9.79□□□□□ -0.84
LIG1-202ENST00000427526 KRTAP24-1Q3LI83 254 aa9.79□□□□□ -0.84
LIG1-202ENST00000427526 LINC00269Q8N2A0 174 aa9.79□□□□□ -0.84
LIG1-202ENST00000427526 CD164L2Q6UWJ8 174 aa9.78□□□□□ -0.84
LIG1-202ENST00000427526 FBN1P35555 2871 aaKnown RBP9.78□□□□□ -0.84
LIG1-202ENST00000427526 NANOS2P60321 138 aaKnown RBP9.78□□□□□ -0.84
LIG1-202ENST00000427526 C14orf132Q9NPU4 83 aa9.77□□□□□ -0.85
LIG1-202ENST00000427526 CYSRT1A8MQ03 144 aa9.77□□□□□ -0.85
LIG1-202ENST00000427526 CXCL5P42830 114 aa9.77□□□□□ -0.85
LIG1-202ENST00000427526 COX17Q14061 63 aa9.77□□□□□ -0.85
LIG1-202ENST00000427526 OXLD1Q5BKU9 147 aa9.77□□□□□ -0.85
LIG1-202ENST00000427526 APOC4P55056 127 aa9.76□□□□□ -0.85
LIG1-202ENST00000427526 PRR3P79522 188 aaKnown RBP9.76□□□□□ -0.85
LIG1-202ENST00000427526 Q8N3U1 123 aa9.76□□□□□ -0.85
LIG1-202ENST00000427526 CHCHD10Q8WYQ3 142 aaPredicted RBP9.76□□□□□ -0.85
LIG1-202ENST00000427526 DSCR8Q96T75 97 aa9.76□□□□□ -0.85
LIG1-202ENST00000427526 IGHV4-28A0A0C4DH34 117 aa9.76□□□□□ -0.85
LIG1-202ENST00000427526 SLPIP03973 132 aa9.76□□□□□ -0.85
LIG1-202ENST00000427526 NDUFC2O95298 119 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms