RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 Q8IZM0 81 aa12.04□□□□□ -0.48
AC055811.2-201ENST00000427497 ADAMTSL4-AS1Q5T5F5 129 aa12.03□□□□□ -0.48
AC055811.2-201ENST00000427497 SPANXDQ9BXN6 97 aa12.03□□□□□ -0.48
AC055811.2-201ENST00000427497 SPANXCQ9NY87 97 aa12.03□□□□□ -0.48
AC055811.2-201ENST00000427497 PTTG1IPP53801 180 aa12.03□□□□□ -0.48
AC055811.2-201ENST00000427497 TAX1BP3O14907 124 aa12.02□□□□□ -0.49
AC055811.2-201ENST00000427497 MALP21145 153 aa12.02□□□□□ -0.49
AC055811.2-201ENST00000427497 KIAA0087Q14695 138 aa12.02□□□□□ -0.49
AC055811.2-201ENST00000427497 SFTA2Q6UW10 78 aa12.02□□□□□ -0.49
AC055811.2-201ENST00000427497 Q6ZVH6 145 aa12.02□□□□□ -0.49
AC055811.2-201ENST00000427497 A0A1B0GV90 55 aa12.01□□□□□ -0.49
AC055811.2-201ENST00000427497 A0A1B0GWB2 263 aa12□□□□□ -0.49
AC055811.2-201ENST00000427497 C6orf226Q5I0X4 101 aa12□□□□□ -0.49
AC055811.2-201ENST00000427497 BIRC6Q9NR09 4857 aa12□□□□□ -0.49
AC055811.2-201ENST00000427497 IBA57-AS1B1ANH7 110 aa12□□□□□ -0.49
AC055811.2-201ENST00000427497 PRSS2P07478 247 aa12□□□□□ -0.49
AC055811.2-201ENST00000427497 CIRBPQ14011 172 aaKnown RBP12□□□□□ -0.49
AC055811.2-201ENST00000427497 NHP2Q9NX24 153 aaKnown RBP12□□□□□ -0.49
AC055811.2-201ENST00000427497 FRAS1Q86XX4 4008 aa11.99□□□□□ -0.49
AC055811.2-201ENST00000427497 TMEM238LA0A1B0GVL6 79 aa11.99□□□□□ -0.49
AC055811.2-201ENST00000427497 A6NJY4 79 aa11.99□□□□□ -0.49
AC055811.2-201ENST00000427497 APOMO95445 188 aa11.99□□□□□ -0.49
AC055811.2-201ENST00000427497 MUSTN1Q8IVN3 82 aa11.99□□□□□ -0.49
AC055811.2-201ENST00000427497 SMIM13P0DJ93 91 aa11.98□□□□□ -0.49
AC055811.2-201ENST00000427497 MEIG1Q5JSS6 88 aa11.97□□□□□ -0.49
AC055811.2-201ENST00000427497 C1orf43Q9BWL3 253 aa11.97□□□□□ -0.49
AC055811.2-201ENST00000427497 CXCL5P42830 114 aa11.97□□□□□ -0.49
AC055811.2-201ENST00000427497 COX11Q9Y6N1 276 aa11.97□□□□□ -0.49
AC055811.2-201ENST00000427497 K7ERJ3 54 aa11.96□□□□□ -0.5
AC055811.2-201ENST00000427497 IFITM1P13164 125 aa11.96□□□□□ -0.5
AC055811.2-201ENST00000427497 RPL24P83731 157 aaKnown RBP11.96□□□□□ -0.5
AC055811.2-201ENST00000427497 CFAP161Q6P656 301 aa11.95□□□□□ -0.5
AC055811.2-201ENST00000427497 C2orf82Q6UX34 121 aa11.95□□□□□ -0.5
AC055811.2-201ENST00000427497 DAND5Q8N907 189 aa11.95□□□□□ -0.5
AC055811.2-201ENST00000427497 A4D1N5 150 aa11.94□□□□□ -0.5
AC055811.2-201ENST00000427497 CKS1BP61024 79 aa11.94□□□□□ -0.5
AC055811.2-201ENST00000427497 SPAG11BQ08648 103 aa11.94□□□□□ -0.5
AC055811.2-201ENST00000427497 IGKV2D-24A0A075B6R9 120 aa11.94□□□□□ -0.5
AC055811.2-201ENST00000427497 VPS13DQ5THJ4 4388 aa11.93□□□□□ -0.5
AC055811.2-201ENST00000427497 A0A0U1RRA0 63 aa11.93□□□□□ -0.5
AC055811.2-201ENST00000427497 EIF4EBP3O60516 100 aaPredicted RBP11.93□□□□□ -0.5
AC055811.2-201ENST00000427497 LINC00308Q8TCZ7 52 aa11.93□□□□□ -0.5
AC055811.2-201ENST00000427497 PPDPFQ9H3Y8 114 aa11.93□□□□□ -0.5
AC055811.2-201ENST00000427497 Q9HAA7 133 aa11.93□□□□□ -0.5
AC055811.2-201ENST00000427497 CFC1BP0CG36 223 aa11.92□□□□□ -0.5
AC055811.2-201ENST00000427497 CFC1P0CG37 223 aa11.92□□□□□ -0.5
AC055811.2-201ENST00000427497 UBE2DNLQ8IWF7 75 aa11.92□□□□□ -0.5
AC055811.2-201ENST00000427497 RAB37Q96AX2 223 aa11.92□□□□□ -0.5
AC055811.2-201ENST00000427497 ERG28Q9UKR5 140 aa11.92□□□□□ -0.5
AC055811.2-201ENST00000427497 C9orf118A6NHY6 69 aa11.91□□□□□ -0.5
AC055811.2-201ENST00000427497 NPC2P61916 151 aa11.91□□□□□ -0.5
AC055811.2-201ENST00000427497 SOSTDC1Q6X4U4 206 aa11.91□□□□□ -0.5
AC055811.2-201ENST00000427497 C15orf56Q8N910 161 aa11.91□□□□□ -0.5
AC055811.2-201ENST00000427497 C6orf223Q8N319 242 aa11.9□□□□□ -0.5
AC055811.2-201ENST00000427497 MIR7-3HGQ8N6C7 128 aa11.9□□□□□ -0.5
AC055811.2-201ENST00000427497 NTN5Q8WTR8 489 aaPredicted RBP11.9□□□□□ -0.5
AC055811.2-201ENST00000427497 COPS9Q8WXC6 57 aa11.9□□□□□ -0.5
AC055811.2-201ENST00000427497 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.89□□□□□ -0.51
AC055811.2-201ENST00000427497 LINC00158P58513 81 aa11.89□□□□□ -0.51
AC055811.2-201ENST00000427497 RMI2Q96E14 147 aa11.89□□□□□ -0.51
AC055811.2-201ENST00000427497 DNAH6Q9C0G6 4158 aa11.89□□□□□ -0.51
AC055811.2-201ENST00000427497 A0A0B4J2C4 111 aa11.88□□□□□ -0.51
AC055811.2-201ENST00000427497 LINC00526Q96FQ7 95 aa11.88□□□□□ -0.51
AC055811.2-201ENST00000427497 KRTAP1-5Q9BYS1 174 aa11.88□□□□□ -0.51
AC055811.2-201ENST00000427497 PFN2P35080 140 aa11.87□□□□□ -0.51
AC055811.2-201ENST00000427497 COX17Q14061 63 aa11.87□□□□□ -0.51
AC055811.2-201ENST00000427497 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
AC055811.2-201ENST00000427497 UNQ6190/PRO20217Q6UXQ8 127 aa11.87□□□□□ -0.51
AC055811.2-201ENST00000427497 H3BUT2 72 aa11.87□□□□□ -0.51
AC055811.2-201ENST00000427497 DNAH10Q8IVF4 4471 aa11.86□□□□□ -0.51
AC055811.2-201ENST00000427497 GVQW2A0A096LPI5 108 aaPredicted RBP11.86□□□□□ -0.51
AC055811.2-201ENST00000427497 ZNF561-AS1K7EIQ3 104 aa11.85□□□□□ -0.51
AC055811.2-201ENST00000427497 HIGD2BQ4VC39 106 aa11.85□□□□□ -0.51
AC055811.2-201ENST00000427497 NAA38Q9BRA0 125 aaKnown RBP11.85□□□□□ -0.51
AC055811.2-201ENST00000427497 PRO1854Q9UHT4 67 aa11.85□□□□□ -0.51
AC055811.2-201ENST00000427497 C2orf48Q96LS8 159 aa11.84□□□□□ -0.51
AC055811.2-201ENST00000427497 C9orf116Q5BN46 136 aaPredicted RBP11.84□□□□□ -0.51
AC055811.2-201ENST00000427497 PGPEP1Q9NXJ5 209 aa11.84□□□□□ -0.51
AC055811.2-201ENST00000427497 F8WDY8 70 aa11.83□□□□□ -0.52
AC055811.2-201ENST00000427497 LOC107984156A0A0G2JMH3 177 aa11.82□□□□□ -0.52
AC055811.2-201ENST00000427497 A0A1W2PPM0 123 aa11.82□□□□□ -0.52
AC055811.2-201ENST00000427497 TSPAN13O95857 204 aa11.82□□□□□ -0.52
AC055811.2-201ENST00000427497 ARL17AQ8IVW1 177 aa11.82□□□□□ -0.52
AC055811.2-201ENST00000427497 C6orf48Q9UBA6 75 aa11.82□□□□□ -0.52
AC055811.2-201ENST00000427497 TRBV30A0A0K0K1B3 111 aa11.81□□□□□ -0.52
AC055811.2-201ENST00000427497 CAMK2N2Q96S95 79 aa11.81□□□□□ -0.52
AC055811.2-201ENST00000427497 VAMP3Q15836 100 aa11.8□□□□□ -0.52
AC055811.2-201ENST00000427497 TTC32Q5I0X7 151 aa11.8□□□□□ -0.52
AC055811.2-201ENST00000427497 HECTD4Q9Y4D8 3996 aa11.8□□□□□ -0.52
AC055811.2-201ENST00000427497 NBDYA0A0U1RRE5 68 aa11.79□□□□□ -0.52
AC055811.2-201ENST00000427497 USP17L23D6RBM5 183 aa11.79□□□□□ -0.52
AC055811.2-201ENST00000427497 SND1-IT1Q9HBX3 110 aa11.79□□□□□ -0.52
AC055811.2-201ENST00000427497 Q6ZRU5 148 aa11.78□□□□□ -0.52
AC055811.2-201ENST00000427497 FABP2P12104 132 aa11.78□□□□□ -0.52
AC055811.2-201ENST00000427497 IGKV2-28A0A075B6P5 120 aa11.75□□□□□ -0.53
AC055811.2-201ENST00000427497 IGKV2D-28P01615 120 aa11.75□□□□□ -0.53
AC055811.2-201ENST00000427497 SYCNQ0VAF6 134 aa11.75□□□□□ -0.53
AC055811.2-201ENST00000427497 UBE2V1Q13404 147 aa11.75□□□□□ -0.53
AC055811.2-201ENST00000427497 RPL13AP40429 203 aaKnown RBP11.74□□□□□ -0.53
AC055811.2-201ENST00000427497 K7EP34 96 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms