RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 ERASQ7Z444 233 aa11.23□□□□□ -0.61
NUP50-207ENST00000424634 Q8IZM0 81 aa11.23□□□□□ -0.61
NUP50-207ENST00000424634 LINC01546A6NGU7 62 aa11.22□□□□□ -0.61
NUP50-207ENST00000424634 CKS1BP61024 79 aa11.22□□□□□ -0.61
NUP50-207ENST00000424634 SCGB3A1Q96QR1 104 aa11.22□□□□□ -0.61
NUP50-207ENST00000424634 M0QXV9 152 aa11.21□□□□□ -0.61
NUP50-207ENST00000424634 S100PP25815 95 aa11.21□□□□□ -0.61
NUP50-207ENST00000424634 SEC11AP67812 179 aa11.21□□□□□ -0.61
NUP50-207ENST00000424634 C10orf91Q5T1B1 145 aa11.21□□□□□ -0.61
NUP50-207ENST00000424634 COMMD7Q86VX2 200 aa11.21□□□□□ -0.61
NUP50-207ENST00000424634 GEMIN7Q9H840 131 aaKnown RBP11.21□□□□□ -0.61
NUP50-207ENST00000424634 LINC00469Q8N7U9 141 aa11.2□□□□□ -0.62
NUP50-207ENST00000424634 DIRC1Q969H9 104 aa11.19□□□□□ -0.62
NUP50-207ENST00000424634 SMIM1B2RUZ4 78 aa11.17□□□□□ -0.62
NUP50-207ENST00000424634 H0Y9J4 135 aa11.17□□□□□ -0.62
NUP50-207ENST00000424634 UBE2BP63146 152 aa11.17□□□□□ -0.62
NUP50-207ENST00000424634 MRPL18Q9H0U6 180 aaKnown RBP11.17□□□□□ -0.62
NUP50-207ENST00000424634 CST9LQ9H4G1 147 aa11.17□□□□□ -0.62
NUP50-207ENST00000424634 XAGE1AQ9HD64 81 aa11.17□□□□□ -0.62
NUP50-207ENST00000424634 TINCRA0A1B0GVN0 87 aa11.16□□□□□ -0.62
NUP50-207ENST00000424634 F8VRH5 84 aa11.16□□□□□ -0.62
NUP50-207ENST00000424634 FABP9Q0Z7S8 132 aa11.16□□□□□ -0.62
NUP50-207ENST00000424634 CARHSP1Q9Y2V2 147 aaKnown RBP11.16□□□□□ -0.62
NUP50-207ENST00000424634 IGLV5-45A0A087WSX0 123 aa11.15□□□□□ -0.62
NUP50-207ENST00000424634 COX19Q49B96 90 aa11.15□□□□□ -0.62
NUP50-207ENST00000424634 PRR26Q8N8Z3 221 aa11.15□□□□□ -0.62
NUP50-207ENST00000424634 RPS10P5Q9NQ39 176 aa11.15□□□□□ -0.62
NUP50-207ENST00000424634 C22orf24Q9Y442 160 aa11.15□□□□□ -0.62
NUP50-207ENST00000424634 RNF213Q63HN8 5207 aa11.14□□□□□ -0.63
NUP50-207ENST00000424634 LINC01549A6NIU2 74 aa11.13□□□□□ -0.63
NUP50-207ENST00000424634 KRTAP1-4P0C5Y4 121 aa11.13□□□□□ -0.63
NUP50-207ENST00000424634 RHEBQ15382 184 aa11.13□□□□□ -0.63
NUP50-207ENST00000424634 PDZD11Q5EBL8 140 aa11.13□□□□□ -0.63
NUP50-207ENST00000424634 FA2HQ7L5A8 372 aa11.13□□□□□ -0.63
NUP50-207ENST00000424634 PMVKQ15126 192 aa11.12□□□□□ -0.63
NUP50-207ENST00000424634 COX7B2Q8TF08 81 aa11.12□□□□□ -0.63
NUP50-207ENST00000424634 URB1-AS1Q96HZ7 61 aa11.12□□□□□ -0.63
NUP50-207ENST00000424634 SPINK8P0C7L1 97 aa11.11□□□□□ -0.63
NUP50-207ENST00000424634 CXCL5P42830 114 aa11.11□□□□□ -0.63
NUP50-207ENST00000424634 SMCO4Q9NRQ5 59 aa11.11□□□□□ -0.63
NUP50-207ENST00000424634 A0A096LNJ9 63 aa11.1□□□□□ -0.63
NUP50-207ENST00000424634 LPAP08519 4548 aa11.09□□□□□ -0.63
NUP50-207ENST00000424634 ZNF861PO60384 105 aa11.07□□□□□ -0.64
NUP50-207ENST00000424634 RAB5BP61020 215 aa11.07□□□□□ -0.64
NUP50-207ENST00000424634 LBHQ53QV2 105 aaPredicted RBP11.07□□□□□ -0.64
NUP50-207ENST00000424634 C18orf32Q8TCD1 76 aa11.07□□□□□ -0.64
NUP50-207ENST00000424634 TP73-AS1Q9UF72 201 aa11.07□□□□□ -0.64
NUP50-207ENST00000424634 TRAPPC1Q9Y5R8 145 aa11.07□□□□□ -0.64
NUP50-207ENST00000424634 LINC00614P0C842 121 aa11.06□□□□□ -0.64
NUP50-207ENST00000424634 MRPL55Q7Z7F7 128 aaKnown RBP11.06□□□□□ -0.64
NUP50-207ENST00000424634 IGLV1-50A0A075B6I6 118 aa11.05□□□□□ -0.64
NUP50-207ENST00000424634 NUPR1O60356 82 aa11.05□□□□□ -0.64
NUP50-207ENST00000424634 IGLC3P0DOY3 106 aa11.05□□□□□ -0.64
NUP50-207ENST00000424634 NDUFA6P56556 154 aa11.04□□□□□ -0.64
NUP50-207ENST00000424634 PMCHL1Q16048 86 aa11.04□□□□□ -0.64
NUP50-207ENST00000424634 LINC00167Q96N53 147 aa11.04□□□□□ -0.64
NUP50-207ENST00000424634 IGLV5-39A0A0G2JS06 123 aa11.03□□□□□ -0.64
NUP50-207ENST00000424634 H3BRM9 83 aa11.03□□□□□ -0.64
NUP50-207ENST00000424634 APOC3P02656 99 aa11.03□□□□□ -0.64
NUP50-207ENST00000424634 RPL37AP8A6NKH3 93 aa11.02□□□□□ -0.65
NUP50-207ENST00000424634 ZNF22P17026 224 aaPredicted RBP11.02□□□□□ -0.65
NUP50-207ENST00000424634 HBDP02042 147 aa11.01□□□□□ -0.65
NUP50-207ENST00000424634 IGLV5-37A0A075B6J1 123 aa11□□□□□ -0.65
NUP50-207ENST00000424634 GAGE10A6NGK3 116 aa11□□□□□ -0.65
NUP50-207ENST00000424634 BCE1O60756 84 aa11□□□□□ -0.65
NUP50-207ENST00000424634 ATP5LO75964 103 aa10.99□□□□□ -0.65
NUP50-207ENST00000424634 PFN2P35080 140 aa10.98□□□□□ -0.65
NUP50-207ENST00000424634 YPEL4Q96NS1 127 aa10.98□□□□□ -0.65
NUP50-207ENST00000424634 C11orf86A6NJI1 115 aa10.97□□□□□ -0.65
NUP50-207ENST00000424634 SCO1O75880 301 aa10.97□□□□□ -0.65
NUP50-207ENST00000424634 SNAPINO95295 136 aa10.97□□□□□ -0.65
NUP50-207ENST00000424634 BAGE3Q86Y29 109 aa10.97□□□□□ -0.65
NUP50-207ENST00000424634 SVBPQ8N300 66 aa10.97□□□□□ -0.65
NUP50-207ENST00000424634 RPL13AP40429 203 aaKnown RBP10.96□□□□□ -0.65
NUP50-207ENST00000424634 RPL28P46779 137 aaKnown RBP10.96□□□□□ -0.65
NUP50-207ENST00000424634 NKAPP1Q8N9T2 125 aa10.95□□□□□ -0.66
NUP50-207ENST00000424634 KRTAP13-1Q8IUC0 172 aa10.94□□□□□ -0.66
NUP50-207ENST00000424634 ZNF625Q96I27 306 aaPredicted RBP10.94□□□□□ -0.66
NUP50-207ENST00000424634 SND1-IT1Q9HBX3 110 aa10.94□□□□□ -0.66
NUP50-207ENST00000424634 ERG28Q9UKR5 140 aa10.94□□□□□ -0.66
NUP50-207ENST00000424634 A0A087X002 238 aa10.93□□□□□ -0.66
NUP50-207ENST00000424634 NDUFA5Q16718 116 aa10.93□□□□□ -0.66
NUP50-207ENST00000424634 TMEM170BQ5T4T1 132 aa10.93□□□□□ -0.66
NUP50-207ENST00000424634 VPREB1P12018 145 aa10.92□□□□□ -0.66
NUP50-207ENST00000424634 Q8NDZ9 215 aa10.92□□□□□ -0.66
NUP50-207ENST00000424634 IGKV2-28A0A075B6P5 120 aa10.91□□□□□ -0.66
NUP50-207ENST00000424634 IGKV2D-28P01615 120 aa10.91□□□□□ -0.66
NUP50-207ENST00000424634 COX17Q14061 63 aa10.91□□□□□ -0.66
NUP50-207ENST00000424634 CHTOPQ9Y3Y2 248 aaKnown RBP10.91□□□□□ -0.66
NUP50-207ENST00000424634 ANAPC11Q9NYG5 84 aa10.9□□□□□ -0.66
NUP50-207ENST00000424634 CHCHD1Q96BP2 118 aaKnown RBP10.89□□□□□ -0.67
NUP50-207ENST00000424634 TMEM223A0PJW6 202 aa10.87□□□□□ -0.67
NUP50-207ENST00000424634 UBE2AP49459 152 aa10.87□□□□□ -0.67
NUP50-207ENST00000424634 IFI27L1Q96BM0 104 aa10.87□□□□□ -0.67
NUP50-207ENST00000424634 TRAV12-1A0A0B4J245 112 aa10.86□□□□□ -0.67
NUP50-207ENST00000424634 TMEM238C9JI98 176 aa10.86□□□□□ -0.67
NUP50-207ENST00000424634 CRYGAP11844 174 aa10.86□□□□□ -0.67
NUP50-207ENST00000424634 TSPAN13O95857 204 aa10.85□□□□□ -0.67
NUP50-207ENST00000424634 RPL24P83731 157 aaKnown RBP10.85□□□□□ -0.67
NUP50-207ENST00000424634 PRR4Q16378 134 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms