RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 C9orf129Q5T035 196 aaKnown RBP15.57■□□□□ 0.08
SMDT1-202ENST00000422252 GNB1LQ9BYB4 327 aa15.57■□□□□ 0.08
SMDT1-202ENST00000422252 GEMIN7Q9H840 131 aaKnown RBP15.57■□□□□ 0.08
SMDT1-202ENST00000422252 CDKN2A-AS1Q9UH64 79 aa15.57■□□□□ 0.08
SMDT1-202ENST00000422252 ERASQ7Z444 233 aa15.56■□□□□ 0.08
SMDT1-202ENST00000422252 ALKBH7Q9BT30 221 aaPredicted RBP15.56■□□□□ 0.08
SMDT1-202ENST00000422252 SCGB3A1Q96QR1 104 aa15.55■□□□□ 0.08
SMDT1-202ENST00000422252 DIRC1Q969H9 104 aa15.54■□□□□ 0.08
SMDT1-202ENST00000422252 UBE2BP63146 152 aa15.53■□□□□ 0.08
SMDT1-202ENST00000422252 LINC01546A6NGU7 62 aa15.52■□□□□ 0.08
SMDT1-202ENST00000422252 COMMD7Q86VX2 200 aa15.52■□□□□ 0.08
SMDT1-202ENST00000422252 LINC01549A6NIU2 74 aa15.51■□□□□ 0.07
SMDT1-202ENST00000422252 COX19Q49B96 90 aa15.51■□□□□ 0.07
SMDT1-202ENST00000422252 LINC00469Q8N7U9 141 aa15.5■□□□□ 0.07
SMDT1-202ENST00000422252 F8VRH5 84 aa15.49■□□□□ 0.07
SMDT1-202ENST00000422252 TINCRA0A1B0GVN0 87 aa15.48■□□□□ 0.07
SMDT1-202ENST00000422252 H0Y9J4 135 aa15.48■□□□□ 0.07
SMDT1-202ENST00000422252 CXCL5P42830 114 aa15.47■□□□□ 0.07
SMDT1-202ENST00000422252 SMIM1B2RUZ4 78 aa15.46■□□□□ 0.07
SMDT1-202ENST00000422252 C10orf91Q5T1B1 145 aa15.46■□□□□ 0.07
SMDT1-202ENST00000422252 MRPL18Q9H0U6 180 aaKnown RBP15.46■□□□□ 0.07
SMDT1-202ENST00000422252 XAGE1AQ9HD64 81 aa15.46■□□□□ 0.07
SMDT1-202ENST00000422252 LRP2P98164 4655 aa15.46■□□□□ 0.07
SMDT1-202ENST00000422252 FABP9Q0Z7S8 132 aa15.45■□□□□ 0.06
SMDT1-202ENST00000422252 FA2HQ7L5A8 372 aa15.45■□□□□ 0.06
SMDT1-202ENST00000422252 CST9LQ9H4G1 147 aa15.45■□□□□ 0.06
SMDT1-202ENST00000422252 RPS10P5Q9NQ39 176 aa15.45■□□□□ 0.06
SMDT1-202ENST00000422252 IGLV5-45A0A087WSX0 123 aa15.44■□□□□ 0.06
SMDT1-202ENST00000422252 RHEBQ15382 184 aa15.44■□□□□ 0.06
SMDT1-202ENST00000422252 PDZD11Q5EBL8 140 aa15.44■□□□□ 0.06
SMDT1-202ENST00000422252 SMCO4Q9NRQ5 59 aa15.44■□□□□ 0.06
SMDT1-202ENST00000422252 CARHSP1Q9Y2V2 147 aaKnown RBP15.43■□□□□ 0.06
SMDT1-202ENST00000422252 C22orf24Q9Y442 160 aa15.43■□□□□ 0.06
SMDT1-202ENST00000422252 PMVKQ15126 192 aa15.42■□□□□ 0.06
SMDT1-202ENST00000422252 PRR26Q8N8Z3 221 aa15.42■□□□□ 0.06
SMDT1-202ENST00000422252 COX7B2Q8TF08 81 aa15.42■□□□□ 0.06
SMDT1-202ENST00000422252 LBHQ53QV2 105 aaPredicted RBP15.4■□□□□ 0.06
SMDT1-202ENST00000422252 SPINK8P0C7L1 97 aa15.38■□□□□ 0.05
SMDT1-202ENST00000422252 NUPR1O60356 82 aa15.37■□□□□ 0.05
SMDT1-202ENST00000422252 KRTAP1-4P0C5Y4 121 aa15.37■□□□□ 0.05
SMDT1-202ENST00000422252 TP73-AS1Q9UF72 201 aa15.37■□□□□ 0.05
SMDT1-202ENST00000422252 IGLV1-50A0A075B6I6 118 aa15.36■□□□□ 0.05
SMDT1-202ENST00000422252 H3BRM9 83 aa15.34■□□□□ 0.05
SMDT1-202ENST00000422252 ZNF861PO60384 105 aa15.34■□□□□ 0.05
SMDT1-202ENST00000422252 MRPL55Q7Z7F7 128 aaKnown RBP15.34■□□□□ 0.05
SMDT1-202ENST00000422252 TRAPPC1Q9Y5R8 145 aa15.33■□□□□ 0.04
SMDT1-202ENST00000422252 A0A096LNJ9 63 aa15.32■□□□□ 0.04
SMDT1-202ENST00000422252 C18orf32Q8TCD1 76 aa15.32■□□□□ 0.04
SMDT1-202ENST00000422252 IGLC3P0DOY3 106 aa15.31■□□□□ 0.04
SMDT1-202ENST00000422252 RAB5BP61020 215 aa15.31■□□□□ 0.04
SMDT1-202ENST00000422252 URB1-AS1Q96HZ7 61 aa15.31■□□□□ 0.04
SMDT1-202ENST00000422252 LINC00614P0C842 121 aa15.3■□□□□ 0.04
SMDT1-202ENST00000422252 NDUFA6P56556 154 aa15.3■□□□□ 0.04
SMDT1-202ENST00000422252 ATP5LO75964 103 aa15.28■□□□□ 0.04
SMDT1-202ENST00000422252 HBDP02042 147 aa15.27■□□□□ 0.04
SMDT1-202ENST00000422252 APOC3P02656 99 aa15.27■□□□□ 0.04
SMDT1-202ENST00000422252 RPL13AP40429 203 aaKnown RBP15.27■□□□□ 0.04
SMDT1-202ENST00000422252 LINC00167Q96N53 147 aa15.27■□□□□ 0.04
SMDT1-202ENST00000422252 IGLV5-39A0A0G2JS06 123 aa15.26■□□□□ 0.03
SMDT1-202ENST00000422252 BCE1O60756 84 aa15.25■□□□□ 0.03
SMDT1-202ENST00000422252 ZNF22P17026 224 aaPredicted RBP15.25■□□□□ 0.03
SMDT1-202ENST00000422252 PMCHL1Q16048 86 aa15.25■□□□□ 0.03
SMDT1-202ENST00000422252 IGLV5-37A0A075B6J1 123 aa15.24■□□□□ 0.03
SMDT1-202ENST00000422252 RPL37AP8A6NKH3 93 aa15.24■□□□□ 0.03
SMDT1-202ENST00000422252 SNAPINO95295 136 aa15.24■□□□□ 0.03
SMDT1-202ENST00000422252 RPL28P46779 137 aaKnown RBP15.23■□□□□ 0.03
SMDT1-202ENST00000422252 GAGE10A6NGK3 116 aa15.22■□□□□ 0.03
SMDT1-202ENST00000422252 NDUFA5Q16718 116 aa15.22■□□□□ 0.03
SMDT1-202ENST00000422252 SVBPQ8N300 66 aa15.22■□□□□ 0.03
SMDT1-202ENST00000422252 NKAPP1Q8N9T2 125 aa15.22■□□□□ 0.03
SMDT1-202ENST00000422252 PFN2P35080 140 aa15.21■□□□□ 0.03
SMDT1-202ENST00000422252 RNF213Q63HN8 5207 aa15.2■□□□□ 0.02
SMDT1-202ENST00000422252 BAGE3Q86Y29 109 aa15.19■□□□□ 0.02
SMDT1-202ENST00000422252 C11orf86A6NJI1 115 aa15.17■□□□□ 0.02
SMDT1-202ENST00000422252 ERG28Q9UKR5 140 aa15.17■□□□□ 0.02
SMDT1-202ENST00000422252 TMEM170BQ5T4T1 132 aa15.16■□□□□ 0.02
SMDT1-202ENST00000422252 COX17Q14061 63 aa15.15■□□□□ 0.02
SMDT1-202ENST00000422252 SND1-IT1Q9HBX3 110 aa15.14■□□□□ 0.01
SMDT1-202ENST00000422252 LPAP08519 4548 aa15.14■□□□□ 0.01
SMDT1-202ENST00000422252 SCO1O75880 301 aa15.13■□□□□ 0.01
SMDT1-202ENST00000422252 SFTA2Q6UW10 78 aa15.13■□□□□ 0.01
SMDT1-202ENST00000422252 ZNF625Q96I27 306 aaPredicted RBP15.13■□□□□ 0.01
SMDT1-202ENST00000422252 IGKV2-28A0A075B6P5 120 aa15.12■□□□□ 0.01
SMDT1-202ENST00000422252 IGKV2D-28P01615 120 aa15.12■□□□□ 0.01
SMDT1-202ENST00000422252 UBE2AP49459 152 aa15.12■□□□□ 0.01
SMDT1-202ENST00000422252 CHTOPQ9Y3Y2 248 aaKnown RBP15.12■□□□□ 0.01
SMDT1-202ENST00000422252 VPREB1P12018 145 aa15.11■□□□□ 0.01
SMDT1-202ENST00000422252 KRTAP13-1Q8IUC0 172 aa15.11■□□□□ 0.01
SMDT1-202ENST00000422252 YPEL4Q96NS1 127 aa15.11■□□□□ 0.01
SMDT1-202ENST00000422252 A0A087X002 238 aa15.1■□□□□ 0.01
SMDT1-202ENST00000422252 CHCHD1Q96BP2 118 aaKnown RBP15.1■□□□□ 0.01
SMDT1-202ENST00000422252 CRYGAP11844 174 aa15.08■□□□□ 0
SMDT1-202ENST00000422252 RPL24P83731 157 aaKnown RBP15.08■□□□□ 0
SMDT1-202ENST00000422252 TRAV12-1A0A0B4J245 112 aa15.06■□□□□ 0
SMDT1-202ENST00000422252 IFI27L1Q96BM0 104 aa15.06■□□□□ 0
SMDT1-202ENST00000422252 PRR4Q16378 134 aa15.05■□□□□ -0
SMDT1-202ENST00000422252 TYMSOSQ8TAI1 123 aa15.05■□□□□ -0
SMDT1-202ENST00000422252 TMEM223A0PJW6 202 aa15.04■□□□□ -0
SMDT1-202ENST00000422252 Q8NDZ9 215 aa15.03■□□□□ -0
SMDT1-202ENST00000422252 TMEM126AQ9H061 195 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms