RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 SUMO4Q6EEV6 95 aa6.78□□□□□ -1.32
UFD1-203ENST00000421968 Q8N8P6 123 aa6.78□□□□□ -1.32
UFD1-203ENST00000421968 NRACQ8N912 160 aa6.78□□□□□ -1.32
UFD1-203ENST00000421968 ST20Q9HBF5 79 aa6.78□□□□□ -1.32
UFD1-203ENST00000421968 TRBV27A0A0K0K1C4 114 aa6.77□□□□□ -1.33
UFD1-203ENST00000421968 ZNF861PO60384 105 aa6.77□□□□□ -1.33
UFD1-203ENST00000421968 POLR2KP53803 58 aaKnown RBP6.77□□□□□ -1.33
UFD1-203ENST00000421968 NDUFA6P56556 154 aa6.77□□□□□ -1.33
UFD1-203ENST00000421968 UBE2BP63146 152 aa6.77□□□□□ -1.33
UFD1-203ENST00000421968 KRTAP13-3Q3SY46 172 aa6.77□□□□□ -1.33
UFD1-203ENST00000421968 FAM168BA1KXE4 195 aa6.76□□□□□ -1.33
UFD1-203ENST00000421968 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.76□□□□□ -1.33
UFD1-203ENST00000421968 NCR2O95944 276 aa6.76□□□□□ -1.33
UFD1-203ENST00000421968 NPYP01303 97 aa6.76□□□□□ -1.33
UFD1-203ENST00000421968 ORMDL2Q53FV1 153 aa6.76□□□□□ -1.33
UFD1-203ENST00000421968 FA2HQ7L5A8 372 aa6.76□□□□□ -1.33
UFD1-203ENST00000421968 KIR2DL4Q99706 377 aa6.76□□□□□ -1.33
UFD1-203ENST00000421968 SMIM2Q9BVW6 85 aa6.76□□□□□ -1.33
UFD1-203ENST00000421968 I3L3M4 83 aa6.75□□□□□ -1.33
UFD1-203ENST00000421968 HSBP1O75506 76 aa6.75□□□□□ -1.33
UFD1-203ENST00000421968 XCL1P47992 114 aa6.75□□□□□ -1.33
UFD1-203ENST00000421968 SMAGPQ0VAQ4 97 aa6.75□□□□□ -1.33
UFD1-203ENST00000421968 TMEM18Q96B42 140 aa6.75□□□□□ -1.33
UFD1-203ENST00000421968 TMA7Q9Y2S6 64 aaKnown RBP6.75□□□□□ -1.33
UFD1-203ENST00000421968 IGLV4-69A0A075B6H9 119 aa6.74□□□□□ -1.33
UFD1-203ENST00000421968 SDHAF1A6NFY7 115 aa6.74□□□□□ -1.33
UFD1-203ENST00000421968 S100A2P29034 98 aa6.74□□□□□ -1.33
UFD1-203ENST00000421968 AKR1D1P51857 326 aa6.74□□□□□ -1.33
UFD1-203ENST00000421968 SNRPEP62304 92 aaKnown RBP6.74□□□□□ -1.33
UFD1-203ENST00000421968 FAM19A5Q7Z5A7 132 aaPredicted RBP6.74□□□□□ -1.33
UFD1-203ENST00000421968 SMKR1H3BMG3 65 aa6.73□□□□□ -1.33
UFD1-203ENST00000421968 SERF1AO75920 110 aa6.73□□□□□ -1.33
UFD1-203ENST00000421968 NPSP0C0P6 89 aa6.73□□□□□ -1.33
UFD1-203ENST00000421968 IFI27P40305 119 aaPredicted RBP6.73□□□□□ -1.33
UFD1-203ENST00000421968 KRTAP13-2Q52LG2 175 aa6.73□□□□□ -1.33
UFD1-203ENST00000421968 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
UFD1-203ENST00000421968 HIST3H2BBQ8N257 126 aa6.73□□□□□ -1.33
UFD1-203ENST00000421968 CAMK2N2Q96S95 79 aa6.73□□□□□ -1.33
UFD1-203ENST00000421968 ANAPC11Q9NYG5 84 aa6.73□□□□□ -1.33
UFD1-203ENST00000421968 FCER1GP30273 86 aa6.72□□□□□ -1.33
UFD1-203ENST00000421968 RNASEKQ6P5S7 137 aaKnown RBP6.72□□□□□ -1.33
UFD1-203ENST00000421968 FP248Q71RG6 208 aaPredicted RBP6.72□□□□□ -1.33
UFD1-203ENST00000421968 OR5A1Q8NGJ0 315 aa6.72□□□□□ -1.33
UFD1-203ENST00000421968 OPRPNQ99935 248 aaPredicted RBP6.72□□□□□ -1.33
UFD1-203ENST00000421968 HSPB8Q9UJY1 196 aa6.72□□□□□ -1.33
UFD1-203ENST00000421968 LOC389332A0A1B0GUA5 103 aa6.71□□□□□ -1.34
UFD1-203ENST00000421968 KRTAP4-16G5E9R7 235 aaPredicted RBP6.71□□□□□ -1.34
UFD1-203ENST00000421968 H7C423 109 aa6.71□□□□□ -1.34
UFD1-203ENST00000421968 HBDP02042 147 aa6.71□□□□□ -1.34
UFD1-203ENST00000421968 RNF151Q2KHN1 245 aa6.71□□□□□ -1.34
UFD1-203ENST00000421968 RPL39LQ96EH5 51 aaKnown RBP6.71□□□□□ -1.34
UFD1-203ENST00000421968 CCL25O15444 150 aa6.7□□□□□ -1.34
UFD1-203ENST00000421968 ATP5LO75964 103 aa6.7□□□□□ -1.34
UFD1-203ENST00000421968 LINC00310P59036 64 aa6.7□□□□□ -1.34
UFD1-203ENST00000421968 CTAG1AP78358 180 aa6.7□□□□□ -1.34
UFD1-203ENST00000421968 COTL1Q14019 142 aa6.7□□□□□ -1.34
UFD1-203ENST00000421968 SS18Q15532 418 aa6.7□□□□□ -1.34
UFD1-203ENST00000421968 AMMECR1LQ6DCA0 310 aa6.7□□□□□ -1.34
UFD1-203ENST00000421968 URB1-AS1Q96HZ7 61 aa6.7□□□□□ -1.34
UFD1-203ENST00000421968 M0QXV9 152 aa6.69□□□□□ -1.34
UFD1-203ENST00000421968 LEPROTL1O95214 131 aa6.69□□□□□ -1.34
UFD1-203ENST00000421968 PAPPA-AS1Q5QFB9 102 aa6.69□□□□□ -1.34
UFD1-203ENST00000421968 TOMM6Q96B49 74 aa6.68□□□□□ -1.34
UFD1-203ENST00000421968 TMEM141Q96I45 108 aa6.68□□□□□ -1.34
UFD1-203ENST00000421968 HIST1H2BLQ99880 126 aa6.68□□□□□ -1.34
UFD1-203ENST00000421968 TIMM21Q9BVV7 248 aa6.68□□□□□ -1.34
UFD1-203ENST00000421968 CYSLTR1Q9Y271 337 aa6.68□□□□□ -1.34
UFD1-203ENST00000421968 PYGO1Q9Y3Y4 419 aa6.68□□□□□ -1.34
UFD1-203ENST00000421968 CSDC2Q9Y534 153 aaKnown RBP6.68□□□□□ -1.34
UFD1-203ENST00000421968 NUPR1O60356 82 aa6.67□□□□□ -1.34
UFD1-203ENST00000421968 PDZD11Q5EBL8 140 aa6.67□□□□□ -1.34
UFD1-203ENST00000421968 ERASQ7Z444 233 aa6.67□□□□□ -1.34
UFD1-203ENST00000421968 TIMM17AQ99595 171 aa6.67□□□□□ -1.34
UFD1-203ENST00000421968 MAP1LC3CQ9BXW4 147 aa6.67□□□□□ -1.34
UFD1-203ENST00000421968 FABP4P15090 132 aa6.66□□□□□ -1.34
UFD1-203ENST00000421968 ZNF25P17030 456 aaPredicted RBP6.66□□□□□ -1.34
UFD1-203ENST00000421968 C2orf66Q6UXQ4 117 aa6.66□□□□□ -1.34
UFD1-203ENST00000421968 SPANXA1Q9NS26 97 aa6.66□□□□□ -1.34
UFD1-203ENST00000421968 LINC00959A0A1B0GUT2 108 aa6.65□□□□□ -1.34
UFD1-203ENST00000421968 LOC105371267A0A1B0GV96 52 aa6.65□□□□□ -1.34
UFD1-203ENST00000421968 PET117Q6UWS5 81 aa6.65□□□□□ -1.34
UFD1-203ENST00000421968 MRPL52Q86TS9 123 aaKnown RBP6.65□□□□□ -1.34
UFD1-203ENST00000421968 KRTAP7-1Q8IUC3 87 aa6.65□□□□□ -1.34
UFD1-203ENST00000421968 A0A096LNJ9 63 aa6.64□□□□□ -1.35
UFD1-203ENST00000421968 C20orf202A1L168 122 aa6.64□□□□□ -1.35
UFD1-203ENST00000421968 MALP21145 153 aa6.64□□□□□ -1.35
UFD1-203ENST00000421968 RPL28P46779 137 aaKnown RBP6.64□□□□□ -1.35
UFD1-203ENST00000421968 MRPS36P82909 103 aaKnown RBP6.64□□□□□ -1.35
UFD1-203ENST00000421968 KRTAP6-3Q3LI67 103 aa6.64□□□□□ -1.35
UFD1-203ENST00000421968 CD164L2Q6UWJ8 174 aa6.64□□□□□ -1.35
UFD1-203ENST00000421968 FAM19A2Q8N3H0 131 aa6.64□□□□□ -1.35
UFD1-203ENST00000421968 IFI27L1Q96BM0 104 aa6.64□□□□□ -1.35
UFD1-203ENST00000421968 C2orf48Q96LS8 159 aa6.64□□□□□ -1.35
UFD1-203ENST00000421968 SCGB3A1Q96QR1 104 aa6.64□□□□□ -1.35
UFD1-203ENST00000421968 IGKV2D-26A0A0A0MRZ7 120 aa6.63□□□□□ -1.35
UFD1-203ENST00000421968 TRAV12-1A0A0B4J245 112 aa6.63□□□□□ -1.35
UFD1-203ENST00000421968 IGIPA6NJ69 53 aa6.63□□□□□ -1.35
UFD1-203ENST00000421968 IFITM10A6NMD0 228 aa6.63□□□□□ -1.35
UFD1-203ENST00000421968 Q6ZN92 141 aa6.63□□□□□ -1.35
UFD1-203ENST00000421968 OR10D4PQ8NGN7 298 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms