RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 CARD19Q96LW7 228 aa10.19□□□□□ -0.78
DDX55-203ENST00000421670 CKS1BP61024 79 aa10.18□□□□□ -0.78
DDX55-203ENST00000421670 UNQ6190/PRO20217Q6UXQ8 127 aa10.18□□□□□ -0.78
DDX55-203ENST00000421670 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.18□□□□□ -0.78
DDX55-203ENST00000421670 NDUFA1O15239 70 aa10.18□□□□□ -0.78
DDX55-203ENST00000421670 TSPEAR-AS2P59090 65 aa10.18□□□□□ -0.78
DDX55-203ENST00000421670 MAJINQ3KP22 176 aa10.17□□□□□ -0.78
DDX55-203ENST00000421670 PGPEP1Q9NXJ5 209 aa10.17□□□□□ -0.78
DDX55-203ENST00000421670 E9PLD3 99 aa10.16□□□□□ -0.78
DDX55-203ENST00000421670 LEPROTO15243 131 aa10.16□□□□□ -0.78
DDX55-203ENST00000421670 AKR1D1P51857 326 aa10.16□□□□□ -0.78
DDX55-203ENST00000421670 CDPF1Q6NVV7 123 aa10.16□□□□□ -0.78
DDX55-203ENST00000421670 LRP1BQ9NZR2 4599 aa10.16□□□□□ -0.78
DDX55-203ENST00000421670 DYNC1H1Q14204 4646 aaKnown RBP10.16□□□□□ -0.78
DDX55-203ENST00000421670 CXCL5P42830 114 aa10.15□□□□□ -0.78
DDX55-203ENST00000421670 JOSD1Q15040 202 aaPredicted RBP10.15□□□□□ -0.78
DDX55-203ENST00000421670 C9orf163Q8N9P6 203 aa10.15□□□□□ -0.78
DDX55-203ENST00000421670 C6orf48Q9UBA6 75 aa10.15□□□□□ -0.78
DDX55-203ENST00000421670 IGKV2D-26A0A0A0MRZ7 120 aa10.14□□□□□ -0.79
DDX55-203ENST00000421670 J3QQQ9 107 aa10.14□□□□□ -0.79
DDX55-203ENST00000421670 ANKRD39Q53RE8 183 aa10.14□□□□□ -0.79
DDX55-203ENST00000421670 F8WDY8 70 aa10.14□□□□□ -0.79
DDX55-203ENST00000421670 C9orf116Q5BN46 136 aaPredicted RBP10.14□□□□□ -0.79
DDX55-203ENST00000421670 PYY3Q5JQD4 70 aa10.14□□□□□ -0.79
DDX55-203ENST00000421670 PLEKHB2Q96CS7 222 aa10.14□□□□□ -0.79
DDX55-203ENST00000421670 C16orf90A8MZG2 172 aa10.13□□□□□ -0.79
DDX55-203ENST00000421670 ZNF625Q96I27 306 aaPredicted RBP10.13□□□□□ -0.79
DDX55-203ENST00000421670 TRBV30A0A0K0K1B3 111 aa10.12□□□□□ -0.79
DDX55-203ENST00000421670 LGALS3P17931 250 aaKnown RBP10.12□□□□□ -0.79
DDX55-203ENST00000421670 GCSHP23434 173 aa10.12□□□□□ -0.79
DDX55-203ENST00000421670 NDUFA12Q9UI09 145 aa10.12□□□□□ -0.79
DDX55-203ENST00000421670 DNAH8Q96JB1 4490 aa10.11□□□□□ -0.79
DDX55-203ENST00000421670 NMUP48645 174 aa10.11□□□□□ -0.79
DDX55-203ENST00000421670 TTTY13Q9BZ97 58 aa10.11□□□□□ -0.79
DDX55-203ENST00000421670 HSBP1L1C9JCN9 74 aa10.1□□□□□ -0.79
DDX55-203ENST00000421670 KRTAP10-1P60331 282 aa10.1□□□□□ -0.79
DDX55-203ENST00000421670 RNF151Q2KHN1 245 aa10.09□□□□□ -0.79
DDX55-203ENST00000421670 RPL18AQ02543 176 aaKnown RBP10.09□□□□□ -0.79
DDX55-203ENST00000421670 SFTA2Q6UW10 78 aa10.09□□□□□ -0.79
DDX55-203ENST00000421670 SDIM1Q6ZPB5 146 aa10.09□□□□□ -0.79
DDX55-203ENST00000421670 LOC105371267A0A1B0GV96 52 aa10.08□□□□□ -0.8
DDX55-203ENST00000421670 A0A096LNI7 61 aa10.07□□□□□ -0.8
DDX55-203ENST00000421670 LOC107984640A0A0U1RRK4 108 aa10.07□□□□□ -0.8
DDX55-203ENST00000421670 MYMXA0A1B0GTQ4 84 aa10.07□□□□□ -0.8
DDX55-203ENST00000421670 ERG28Q9UKR5 140 aa10.07□□□□□ -0.8
DDX55-203ENST00000421670 PAM16Q9Y3D7 125 aa10.07□□□□□ -0.8
DDX55-203ENST00000421670 IGKV2-24A0A0C4DH68 120 aa10.06□□□□□ -0.8
DDX55-203ENST00000421670 CHTF8P0CG12 524 aa10.06□□□□□ -0.8
DDX55-203ENST00000421670 PFN2P35080 140 aa10.06□□□□□ -0.8
DDX55-203ENST00000421670 Q6ZRP5 223 aa10.06□□□□□ -0.8
DDX55-203ENST00000421670 PCP2Q8IVA1 136 aa10.06□□□□□ -0.8
DDX55-203ENST00000421670 VAMP8Q9BV40 100 aa10.06□□□□□ -0.8
DDX55-203ENST00000421670 APOBP04114 4563 aaKnown RBP10.06□□□□□ -0.8
DDX55-203ENST00000421670 ZNF815PA8K554 130 aa10.05□□□□□ -0.8
DDX55-203ENST00000421670 NDUFC2-KCTD14E9PQ53 114 aa10.05□□□□□ -0.8
DDX55-203ENST00000421670 PANO1I0J062 215 aa10.05□□□□□ -0.8
DDX55-203ENST00000421670 HERV-K104P63124 156 aa10.05□□□□□ -0.8
DDX55-203ENST00000421670 GAGE2BQ13066 116 aa10.05□□□□□ -0.8
DDX55-203ENST00000421670 A0A0U1RRA0 63 aa10.05□□□□□ -0.8
DDX55-203ENST00000421670 TLX1NBP0CAT3 122 aa10.05□□□□□ -0.8
DDX55-203ENST00000421670 MEIG1Q5JSS6 88 aa10.05□□□□□ -0.8
DDX55-203ENST00000421670 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.05□□□□□ -0.8
DDX55-203ENST00000421670 GAGE2EQ4V326 116 aa10.04□□□□□ -0.8
DDX55-203ENST00000421670 SPATA45Q537H7 98 aa10.04□□□□□ -0.8
DDX55-203ENST00000421670 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
DDX55-203ENST00000421670 GAGE2DQ9UEU5 116 aa10.04□□□□□ -0.8
DDX55-203ENST00000421670 SMIM13P0DJ93 91 aa10.03□□□□□ -0.8
DDX55-203ENST00000421670 PTTG1IPP53801 180 aa10.03□□□□□ -0.8
DDX55-203ENST00000421670 TP73-AS1Q9UF72 201 aa10.03□□□□□ -0.8
DDX55-203ENST00000421670 A0A0J9YXY3 114 aa10.02□□□□□ -0.81
DDX55-203ENST00000421670 PKIGQ9Y2B9 76 aa10.02□□□□□ -0.81
DDX55-203ENST00000421670 LINC00158P58513 81 aa10.01□□□□□ -0.81
DDX55-203ENST00000421670 HAMPP81172 84 aa10.01□□□□□ -0.81
DDX55-203ENST00000421670 COX17Q14061 63 aa10.01□□□□□ -0.81
DDX55-203ENST00000421670 Q6ZSA8 131 aa10.01□□□□□ -0.81
DDX55-203ENST00000421670 SPACA4Q8TDM5 124 aa10.01□□□□□ -0.81
DDX55-203ENST00000421670 XAGE1AQ9HD64 81 aa10.01□□□□□ -0.81
DDX55-203ENST00000421670 DAND5Q8N907 189 aa10□□□□□ -0.81
DDX55-203ENST00000421670 CIRBPQ14011 172 aaKnown RBP9.99□□□□□ -0.81
DDX55-203ENST00000421670 C9orf129Q5T035 196 aaKnown RBP9.99□□□□□ -0.81
DDX55-203ENST00000421670 SCGB1D4Q6XE38 83 aa9.99□□□□□ -0.81
DDX55-203ENST00000421670 SMIM6P0DI80 62 aa9.98□□□□□ -0.81
DDX55-203ENST00000421670 MIR7-3HGQ8N6C7 128 aa9.98□□□□□ -0.81
DDX55-203ENST00000421670 C14orf144Q96I85 54 aa9.98□□□□□ -0.81
DDX55-203ENST00000421670 LINC00587B1AMM8 73 aa9.97□□□□□ -0.81
DDX55-203ENST00000421670 COX8AP10176 69 aa9.97□□□□□ -0.81
DDX55-203ENST00000421670 DPH3Q96FX2 82 aa9.97□□□□□ -0.81
DDX55-203ENST00000421670 SND1-IT1Q9HBX3 110 aa9.97□□□□□ -0.81
DDX55-203ENST00000421670 LINC00474Q9P2X8 69 aa9.97□□□□□ -0.81
DDX55-203ENST00000421670 FAM168BA1KXE4 195 aa9.97□□□□□ -0.81
DDX55-203ENST00000421670 ADAMTSL4-AS1Q5T5F5 129 aa9.97□□□□□ -0.81
DDX55-203ENST00000421670 SCXQ7RTU7 201 aa9.97□□□□□ -0.81
DDX55-203ENST00000421670 LITAFQ99732 161 aa9.97□□□□□ -0.81
DDX55-203ENST00000421670 S100A12P80511 92 aa9.96□□□□□ -0.82
DDX55-203ENST00000421670 BOD1L2Q8IYS8 172 aa9.96□□□□□ -0.82
DDX55-203ENST00000421670 A0A087WYN8 130 aa9.95□□□□□ -0.82
DDX55-203ENST00000421670 CIRBP-AS1Q8TBR5 109 aa9.95□□□□□ -0.82
DDX55-203ENST00000421670 HSPG2P98160 4391 aa9.94□□□□□ -0.82
DDX55-203ENST00000421670 A0A1W2PNN7 141 aa9.94□□□□□ -0.82
DDX55-203ENST00000421670 NPC2P61916 151 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms