RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 CYSLTR1Q9Y271 337 aa9.92□□□□□ -0.82
UPF3AP3-201ENST00000420996 LAMTOR2Q9Y2Q5 125 aa9.92□□□□□ -0.82
UPF3AP3-201ENST00000420996 LOC389332A0A1B0GUA5 103 aa9.91□□□□□ -0.82
UPF3AP3-201ENST00000420996 BCE1O60756 84 aa9.91□□□□□ -0.82
UPF3AP3-201ENST00000420996 IFITM2Q01629 132 aa9.91□□□□□ -0.82
UPF3AP3-201ENST00000420996 LCE2AQ5TA79 106 aaPredicted RBP9.91□□□□□ -0.82
UPF3AP3-201ENST00000420996 C2orf66Q6UXQ4 117 aa9.91□□□□□ -0.82
UPF3AP3-201ENST00000420996 FAM19A3Q7Z5A8 133 aa9.91□□□□□ -0.82
UPF3AP3-201ENST00000420996 MRPL55Q7Z7F7 128 aaKnown RBP9.91□□□□□ -0.82
UPF3AP3-201ENST00000420996 TYMSOSQ8TAI1 123 aa9.91□□□□□ -0.82
UPF3AP3-201ENST00000420996 MAP1LC3AQ9H492 121 aa9.91□□□□□ -0.82
UPF3AP3-201ENST00000420996 NPSP0C0P6 89 aa9.9□□□□□ -0.82
UPF3AP3-201ENST00000420996 F8VRH5 84 aa9.89□□□□□ -0.83
UPF3AP3-201ENST00000420996 Q8N8P6 123 aa9.89□□□□□ -0.83
UPF3AP3-201ENST00000420996 IGIPA6NJ69 53 aa9.88□□□□□ -0.83
UPF3AP3-201ENST00000420996 SEC11AP67812 179 aa9.88□□□□□ -0.83
UPF3AP3-201ENST00000420996 HERVK_113P63121 156 aa9.87□□□□□ -0.83
UPF3AP3-201ENST00000420996 ORMDL2Q53FV1 153 aa9.87□□□□□ -0.83
UPF3AP3-201ENST00000420996 CDKN2A-AS1Q9UH64 79 aa9.87□□□□□ -0.83
UPF3AP3-201ENST00000420996 K7EMI3 77 aa9.86□□□□□ -0.83
UPF3AP3-201ENST00000420996 LINC00167Q96N53 147 aa9.86□□□□□ -0.83
UPF3AP3-201ENST00000420996 RPL37AP8A6NKH3 93 aa9.85□□□□□ -0.83
UPF3AP3-201ENST00000420996 CXCL5P42830 114 aa9.85□□□□□ -0.83
UPF3AP3-201ENST00000420996 CLLU1Q5K131 121 aa9.85□□□□□ -0.83
UPF3AP3-201ENST00000420996 PAPPA-AS1Q5QFB9 102 aa9.84□□□□□ -0.83
UPF3AP3-201ENST00000420996 GEMIN7Q9H840 131 aaKnown RBP9.84□□□□□ -0.83
UPF3AP3-201ENST00000420996 ANAPC11Q9NYG5 84 aa9.84□□□□□ -0.83
UPF3AP3-201ENST00000420996 RAB14P61106 215 aa9.83□□□□□ -0.84
UPF3AP3-201ENST00000420996 KRTAP13-2Q52LG2 175 aa9.83□□□□□ -0.84
UPF3AP3-201ENST00000420996 FAT4Q6V0I7 4981 aa9.82□□□□□ -0.84
UPF3AP3-201ENST00000420996 ADCYAP1P18509 176 aa9.82□□□□□ -0.84
UPF3AP3-201ENST00000420996 KRTAP13-1Q8IUC0 172 aa9.82□□□□□ -0.84
UPF3AP3-201ENST00000420996 NXT2Q9NPJ8 142 aaKnown RBP9.82□□□□□ -0.84
UPF3AP3-201ENST00000420996 G0S2P27469 103 aa9.81□□□□□ -0.84
UPF3AP3-201ENST00000420996 FAM229BQ4G0N7 80 aa9.81□□□□□ -0.84
UPF3AP3-201ENST00000420996 RETNLBQ9BQ08 111 aa9.81□□□□□ -0.84
UPF3AP3-201ENST00000420996 IGLV5-37A0A075B6J1 123 aa9.8□□□□□ -0.84
UPF3AP3-201ENST00000420996 GAGE10A6NGK3 116 aa9.8□□□□□ -0.84
UPF3AP3-201ENST00000420996 ATP6V1G1O75348 118 aa9.8□□□□□ -0.84
UPF3AP3-201ENST00000420996 S100A1P23297 94 aa9.8□□□□□ -0.84
UPF3AP3-201ENST00000420996 TIMM17AQ99595 171 aa9.8□□□□□ -0.84
UPF3AP3-201ENST00000420996 SMIM1B2RUZ4 78 aa9.79□□□□□ -0.84
UPF3AP3-201ENST00000420996 UBE2AP49459 152 aa9.79□□□□□ -0.84
UPF3AP3-201ENST00000420996 TPRXLQ17RH7 258 aa9.79□□□□□ -0.84
UPF3AP3-201ENST00000420996 PDZD11Q5EBL8 140 aa9.79□□□□□ -0.84
UPF3AP3-201ENST00000420996 LINC00304Q8N9R0 145 aa9.79□□□□□ -0.84
UPF3AP3-201ENST00000420996 CDIP1Q9H305 208 aa9.79□□□□□ -0.84
UPF3AP3-201ENST00000420996 NKAPP1Q8N9T2 125 aa9.78□□□□□ -0.84
UPF3AP3-201ENST00000420996 COX7B2Q8TF08 81 aa9.78□□□□□ -0.84
UPF3AP3-201ENST00000420996 TOMM6Q96B49 74 aa9.78□□□□□ -0.84
UPF3AP3-201ENST00000420996 CTAG1AP78358 180 aa9.77□□□□□ -0.85
UPF3AP3-201ENST00000420996 PNRC1Q12796 327 aaPredicted RBP9.77□□□□□ -0.85
UPF3AP3-201ENST00000420996 ANAPC16Q96DE5 110 aa9.77□□□□□ -0.85
UPF3AP3-201ENST00000420996 KRTAP9-6A0A140TA67 174 aa9.76□□□□□ -0.85
UPF3AP3-201ENST00000420996 TINCRA0A1B0GVN0 87 aa9.76□□□□□ -0.85
UPF3AP3-201ENST00000420996 ERASQ7Z444 233 aa9.76□□□□□ -0.85
UPF3AP3-201ENST00000420996 IGLV7-46A0A075B6I9 117 aa9.75□□□□□ -0.85
UPF3AP3-201ENST00000420996 IGKV2D-26A0A0A0MRZ7 120 aa9.75□□□□□ -0.85
UPF3AP3-201ENST00000420996 MT-ND4LP03901 98 aa9.75□□□□□ -0.85
UPF3AP3-201ENST00000420996 RAB5BP61020 215 aa9.75□□□□□ -0.85
UPF3AP3-201ENST00000420996 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
UPF3AP3-201ENST00000420996 TMEM218A2RU14 115 aa9.74□□□□□ -0.85
UPF3AP3-201ENST00000420996 SCGB3A1Q96QR1 104 aa9.74□□□□□ -0.85
UPF3AP3-201ENST00000420996 IGKV2-28A0A075B6P5 120 aa9.72□□□□□ -0.85
UPF3AP3-201ENST00000420996 IGKV2D-28P01615 120 aa9.72□□□□□ -0.85
UPF3AP3-201ENST00000420996 UQCC3Q6UW78 93 aa9.72□□□□□ -0.85
UPF3AP3-201ENST00000420996 MUC17Q685J3 4493 aa9.72□□□□□ -0.85
UPF3AP3-201ENST00000420996 SCO1O75880 301 aa9.71□□□□□ -0.86
UPF3AP3-201ENST00000420996 COMMD7Q86VX2 200 aa9.71□□□□□ -0.86
UPF3AP3-201ENST00000420996 SPINK8P0C7L1 97 aa9.7□□□□□ -0.86
UPF3AP3-201ENST00000420996 CST9LQ9H4G1 147 aa9.7□□□□□ -0.86
UPF3AP3-201ENST00000420996 LINC01549A6NIU2 74 aa9.69□□□□□ -0.86
UPF3AP3-201ENST00000420996 PRLHP81277 87 aa9.69□□□□□ -0.86
UPF3AP3-201ENST00000420996 KIAA1644Q3SXP7 199 aa9.69□□□□□ -0.86
UPF3AP3-201ENST00000420996 FAM19A1Q7Z5A9 133 aa9.69□□□□□ -0.86
UPF3AP3-201ENST00000420996 ATP5LO75964 103 aa9.68□□□□□ -0.86
UPF3AP3-201ENST00000420996 TMEM126AQ9H061 195 aa9.68□□□□□ -0.86
UPF3AP3-201ENST00000420996 MRPL18Q9H0U6 180 aaKnown RBP9.68□□□□□ -0.86
UPF3AP3-201ENST00000420996 PPDPFQ9H3Y8 114 aa9.68□□□□□ -0.86
UPF3AP3-201ENST00000420996 VPREB1P12018 145 aa9.67□□□□□ -0.86
UPF3AP3-201ENST00000420996 SEC11CQ9BY50 192 aa9.67□□□□□ -0.86
UPF3AP3-201ENST00000420996 TMEM238C9JI98 176 aa9.66□□□□□ -0.86
UPF3AP3-201ENST00000420996 H3BRM9 83 aa9.66□□□□□ -0.86
UPF3AP3-201ENST00000420996 PFN2P35080 140 aa9.66□□□□□ -0.86
UPF3AP3-201ENST00000420996 PMVKQ15126 192 aa9.66□□□□□ -0.86
UPF3AP3-201ENST00000420996 C10orf91Q5T1B1 145 aa9.66□□□□□ -0.86
UPF3AP3-201ENST00000420996 SLC7A5P1Q8MH63 180 aa9.66□□□□□ -0.86
UPF3AP3-201ENST00000420996 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
UPF3AP3-201ENST00000420996 LINC01546A6NGU7 62 aa9.65□□□□□ -0.86
UPF3AP3-201ENST00000420996 C3orf22Q8N5N4 141 aa9.65□□□□□ -0.86
UPF3AP3-201ENST00000420996 SND1-IT1Q9HBX3 110 aa9.65□□□□□ -0.86
UPF3AP3-201ENST00000420996 M0R378 163 aa9.64□□□□□ -0.87
UPF3AP3-201ENST00000420996 RPL24P83731 157 aaKnown RBP9.64□□□□□ -0.87
UPF3AP3-201ENST00000420996 SPAG11AQ6PDA7 123 aa9.64□□□□□ -0.87
UPF3AP3-201ENST00000420996 GNB1LQ9BYB4 327 aa9.64□□□□□ -0.87
UPF3AP3-201ENST00000420996 C4orf48Q5BLP8 95 aa9.63□□□□□ -0.87
UPF3AP3-201ENST00000420996 CBLN2Q8IUK8 224 aa9.63□□□□□ -0.87
UPF3AP3-201ENST00000420996 IGLV5-39A0A0G2JS06 123 aa9.62□□□□□ -0.87
UPF3AP3-201ENST00000420996 COX17Q14061 63 aa9.62□□□□□ -0.87
UPF3AP3-201ENST00000420996 ERG28Q9UKR5 140 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms