RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 IGHV3-53P01767 116 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 CRPP02741 224 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 BAALC-AS2P0C853 105 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 RBMY1CP0DJD4 496 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 LINC00694P0DN24 101 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 RPL28P46779 137 aaKnown RBP1.73□□□□□ -2.13
VPS41-206ENST00000418457 RPL18AQ02543 176 aaKnown RBP1.73□□□□□ -2.13
VPS41-206ENST00000418457 DAZ2Q13117 558 aaKnown RBP1.73□□□□□ -2.13
VPS41-206ENST00000418457 DAZ4Q86SG3 579 aaKnown RBP1.73□□□□□ -2.13
VPS41-206ENST00000418457 SERP2Q8N6R1 65 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 CHCHD7Q9BUK0 85 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 DAZ3Q9NR90 486 aaKnown RBP1.73□□□□□ -2.13
VPS41-206ENST00000418457 SPTBN2O15020 2390 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 ZFHX3Q15911 3703 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 ABCA4P78363 2273 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 POLEQ07864 2286 aa1.73□□□□□ -2.13
VPS41-206ENST00000418457 UBR5O95071 2799 aaPredicted RBP1.72□□□□□ -2.13
VPS41-206ENST00000418457 WNK2Q9Y3S1 2297 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 TRBV10-3A0A0K0K1G6 114 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 hADV29S1A0JD25 119 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 RBMY1BA6NDE4 496 aaKnown RBP1.72□□□□□ -2.13
VPS41-206ENST00000418457 RBMY1EA6NEQ0 496 aaKnown RBP1.72□□□□□ -2.13
VPS41-206ENST00000418457 JMJD7-PLA2G4BH0Y9G9 81 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 H3BQ85 93 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 LY6HO94772 140 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 NDUFC2O95298 119 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 TRBV12-3P01733 135 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 IGHV3-11P01762 117 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 RBMY1DP0C7P1 496 aaKnown RBP1.72□□□□□ -2.13
VPS41-206ENST00000418457 RBMY1A1P0DJD3 496 aaKnown RBP1.72□□□□□ -2.13
VPS41-206ENST00000418457 PSMB8P28062 276 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 KLRB1Q12918 225 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 SPINK13Q1W4C9 94 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 KIR2DL5BQ8NHK3 375 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 SMCR5Q8TEV8 140 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 CHCHD10Q8WYQ3 142 aaPredicted RBP1.72□□□□□ -2.13
VPS41-206ENST00000418457 FAM104AQ969W3 186 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 ZNF625Q96I27 306 aaPredicted RBP1.72□□□□□ -2.13
VPS41-206ENST00000418457 OBSCN-AS1Q96MR7 158 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 CDKN2A-AS1Q9UH64 79 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 KLK5Q9Y337 293 aaPredicted RBP1.72□□□□□ -2.13
VPS41-206ENST00000418457 V9GYY9 64 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 UTP20O75691 2785 aaKnown RBP1.72□□□□□ -2.13
VPS41-206ENST00000418457 CSMD2Q7Z408 3487 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 ANKHD1Q8IWZ3 2542 aaKnown RBP1.72□□□□□ -2.13
VPS41-206ENST00000418457 ROS1P08922 2347 aa1.72□□□□□ -2.13
VPS41-206ENST00000418457 MAST4O15021 2626 aa1.71□□□□□ -2.13
VPS41-206ENST00000418457 IGKV3-7A0A075B6H7 116 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.71□□□□□ -2.14
VPS41-206ENST00000418457 TRAV12-2A0A075B6T6 113 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 IGKV2-29A2NJV5 120 aaPredicted RBP1.71□□□□□ -2.14
VPS41-206ENST00000418457 IBA57-AS1B1ANH7 110 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 F5H768 121 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 H3BUX3 64 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 INSP01308 110 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 SYNJ2BPP57105 145 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 DEFB1P60022 68 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 NPC2P61916 151 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 FAM19A5Q7Z5A7 132 aaPredicted RBP1.71□□□□□ -2.14
VPS41-206ENST00000418457 NKAPP1Q8N9T2 125 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 DPH3Q96FX2 82 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 UBE2E2Q96LR5 201 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 BPESC1Q9GZL8 116 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 ORMDL1Q9P0S3 153 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 NACAE9PAV3 2078 aa1.71□□□□□ -2.14
VPS41-206ENST00000418457 TPRP12270 2363 aaKnown RBP1.71□□□□□ -2.14
VPS41-206ENST00000418457 RP1L1Q8IWN7 2480 aaPredicted RBP1.71□□□□□ -2.14
VPS41-206ENST00000418457 TRAV13-1A0A0B4J241 112 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 LOC107984640A0A0U1RRK4 108 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 B4DSR2 109 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 J3QLI3 93 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 TMEM256-PLSCR3K7ERE1 68 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 UBE2L6O14933 153 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 NDUFC1O43677 76 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 APC2O95996 2303 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 CCKP06307 115 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 MSMBP08118 114 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 PDE6GP18545 87 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 CMC4P56277 68 aaPredicted RBP1.7□□□□□ -2.14
VPS41-206ENST00000418457 ATP5EP56381 51 aaPredicted RBP1.7□□□□□ -2.14
VPS41-206ENST00000418457 LY6EQ16553 131 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 CASC10Q5T4H9 136 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 CEMP1Q6PRD7 247 aaPredicted RBP1.7□□□□□ -2.14
VPS41-206ENST00000418457 SOSTDC1Q6X4U4 206 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 BRD3OSQ6XYD6 125 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 LINC00336Q6ZUF6 198 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 TMEM86BQ8N661 226 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 Q8N9L7 120 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 C11orf72Q8NBR9 251 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 MUC7Q8TAX7 377 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 C10orf105Q8TEF2 133 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 COX7B2Q8TF08 81 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 UPK3BQ9BT76 320 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 TMEM243Q9BU79 118 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 UBL5Q9BZL1 73 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 SND1-IT1Q9HBX3 110 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 CDC42SE2Q9NRR3 84 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 FAM208BQ5VWN6 2430 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 FBN2P35556 2912 aa1.7□□□□□ -2.14
VPS41-206ENST00000418457 TEX15Q9BXT5 2789 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms