RNA–Protein interactions for RNA: ENST00000417503.1

SSXP9-201, Transcript of SSX family pseudogene 9, humanhuman

BASIC

Gene SSXP9, Length 292 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP9-201ENST00000417503 H0Y9P7 68 aa1.92□□□□□ -2.1
SSXP9-201ENST00000417503 CTSGP08311 255 aa1.92□□□□□ -2.1
SSXP9-201ENST00000417503 FREM3P0C091 2139 aa1.92□□□□□ -2.1
SSXP9-201ENST00000417503 DEFA4P12838 97 aa1.92□□□□□ -2.1
SSXP9-201ENST00000417503 MIR22HGQ0VDD5 57 aa1.92□□□□□ -2.1
SSXP9-201ENST00000417503 GAFA1Q96PS6 74 aa1.92□□□□□ -2.1
SSXP9-201ENST00000417503 CNFNQ9BYD5 112 aa1.92□□□□□ -2.1
SSXP9-201ENST00000417503 PROK2Q9HC23 129 aa1.92□□□□□ -2.1
SSXP9-201ENST00000417503 CACNA1DQ01668 2161 aa1.92□□□□□ -2.1
SSXP9-201ENST00000417503 HEATR5BQ9P2D3 2071 aa1.91□□□□□ -2.1
SSXP9-201ENST00000417503 IGIPA6NJ69 53 aa1.91□□□□□ -2.1
SSXP9-201ENST00000417503 PRB4P10163 310 aaPredicted RBP1.91□□□□□ -2.1
SSXP9-201ENST00000417503 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
SSXP9-201ENST00000417503 C20orf166-AS1Q96NR2 134 aa1.91□□□□□ -2.1
SSXP9-201ENST00000417503 LINC01558Q9Y6Z2 57 aa1.91□□□□□ -2.1
SSXP9-201ENST00000417503 CUL9Q8IWT3 2517 aa1.91□□□□□ -2.1
SSXP9-201ENST00000417503 PCNX2A6NKB5 2137 aa1.91□□□□□ -2.1
SSXP9-201ENST00000417503 RP1P56715 2156 aa1.91□□□□□ -2.1
SSXP9-201ENST00000417503 MYO16Q9Y6X6 1858 aa1.9□□□□□ -2.1
SSXP9-201ENST00000417503 KIAA1549LQ6ZVL6 1849 aa1.9□□□□□ -2.11
SSXP9-201ENST00000417503 ETDCA0A1B0GVM5 59 aa1.9□□□□□ -2.11
SSXP9-201ENST00000417503 C1orf137Q5JT78 98 aa1.9□□□□□ -2.11
SSXP9-201ENST00000417503 LINC00304Q8N9R0 145 aa1.9□□□□□ -2.11
SSXP9-201ENST00000417503 KLK9Q9UKQ9 250 aa1.9□□□□□ -2.11
SSXP9-201ENST00000417503 PLXNA2O75051 1894 aa1.9□□□□□ -2.11
SSXP9-201ENST00000417503 COL11A1P12107 1806 aaPredicted RBP1.89□□□□□ -2.11
SSXP9-201ENST00000417503 IGKV3D-11A0A0A0MRZ8 115 aa1.89□□□□□ -2.11
SSXP9-201ENST00000417503 ODF3BA8MYP8 253 aa1.89□□□□□ -2.11
SSXP9-201ENST00000417503 NDUFA4O00483 81 aa1.89□□□□□ -2.11
SSXP9-201ENST00000417503 NDUFA1O15239 70 aa1.89□□□□□ -2.11
SSXP9-201ENST00000417503 DEFB112Q30KQ8 113 aa1.89□□□□□ -2.11
SSXP9-201ENST00000417503 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.89□□□□□ -2.11
SSXP9-201ENST00000417503 GPR179Q6PRD1 2367 aa1.88□□□□□ -2.11
SSXP9-201ENST00000417503 SNRNP200O75643 2136 aaKnown RBP1.88□□□□□ -2.11
SSXP9-201ENST00000417503 TRGV4A0A0C4DH28 118 aa1.88□□□□□ -2.11
SSXP9-201ENST00000417503 SPRR5A0A1B0GTR4 108 aa1.88□□□□□ -2.11
SSXP9-201ENST00000417503 IGKV4-1P06312 121 aa1.88□□□□□ -2.11
SSXP9-201ENST00000417503 KRTAP13-3Q3SY46 172 aa1.88□□□□□ -2.11
SSXP9-201ENST00000417503 Q6ZTI0 123 aa1.88□□□□□ -2.11
SSXP9-201ENST00000417503 FDCSPQ8NFU4 85 aa1.88□□□□□ -2.11
SSXP9-201ENST00000417503 NCOA6Q14686 2063 aaPredicted RBP1.87□□□□□ -2.11
SSXP9-201ENST00000417503 TRGV2A0A075B6R0 118 aa1.87□□□□□ -2.11
SSXP9-201ENST00000417503 LCE6AA0A183 80 aa1.87□□□□□ -2.11
SSXP9-201ENST00000417503 A0A1W2PNM2 257 aa1.87□□□□□ -2.11
SSXP9-201ENST00000417503 B4DSR2 109 aa1.87□□□□□ -2.11
SSXP9-201ENST00000417503 H3BSH0 61 aa1.87□□□□□ -2.11
SSXP9-201ENST00000417503 CNBPP62633 177 aaKnown RBP1.87□□□□□ -2.11
SSXP9-201ENST00000417503 PRCDQ00LT1 54 aa1.87□□□□□ -2.11
SSXP9-201ENST00000417503 LINC00322Q6ZN03 302 aaPredicted RBP1.87□□□□□ -2.11
SSXP9-201ENST00000417503 PRO2289Q9P1D8 64 aa1.87□□□□□ -2.11
SSXP9-201ENST00000417503 EML5Q05BV3 1969 aa1.87□□□□□ -2.11
SSXP9-201ENST00000417503 KIAA0100Q14667 2235 aaKnown RBP1.86□□□□□ -2.11
SSXP9-201ENST00000417503 NUPR2A6NF83 97 aa1.86□□□□□ -2.11
SSXP9-201ENST00000417503 CCL22O00626 93 aa1.86□□□□□ -2.11
SSXP9-201ENST00000417503 LINC00308Q8TCZ7 52 aa1.86□□□□□ -2.11
SSXP9-201ENST00000417503 HEATR1Q9H583 2144 aaKnown RBP1.86□□□□□ -2.11
SSXP9-201ENST00000417503 PLXNB2O15031 1838 aa1.86□□□□□ -2.11
SSXP9-201ENST00000417503 MYO7AQ13402 2215 aa1.86□□□□□ -2.11
SSXP9-201ENST00000417503 RTTNQ86VV8 2226 aa1.85□□□□□ -2.11
SSXP9-201ENST00000417503 A0A1W2PNN7 141 aa1.85□□□□□ -2.11
SSXP9-201ENST00000417503 IGLV3-1P01715 115 aa1.85□□□□□ -2.11
SSXP9-201ENST00000417503 ZFHX2Q9C0A1 2572 aaPredicted RBP1.85□□□□□ -2.11
SSXP9-201ENST00000417503 PCDH15Q96QU1 1955 aa1.85□□□□□ -2.11
SSXP9-201ENST00000417503 NCR3O14931 201 aa1.84□□□□□ -2.11
SSXP9-201ENST00000417503 TFF1P04155 84 aa1.84□□□□□ -2.11
SSXP9-201ENST00000417503 COX7BP24311 80 aa1.84□□□□□ -2.11
SSXP9-201ENST00000417503 CCL18P55774 89 aa1.84□□□□□ -2.11
SSXP9-201ENST00000417503 DEFB113Q30KQ7 82 aa1.84□□□□□ -2.11
SSXP9-201ENST00000417503 PIGYQ3MUY2 71 aa1.84□□□□□ -2.11
SSXP9-201ENST00000417503 HCP5Q6MZN7 132 aa1.84□□□□□ -2.11
SSXP9-201ENST00000417503 CSAG1Q6PB30 78 aa1.84□□□□□ -2.11
SSXP9-201ENST00000417503 C9orf163Q8N9P6 203 aa1.84□□□□□ -2.11
SSXP9-201ENST00000417503 ZNF625Q96I27 306 aaPredicted RBP1.84□□□□□ -2.11
SSXP9-201ENST00000417503 KCNQ1DNQ9H478 68 aa1.84□□□□□ -2.11
SSXP9-201ENST00000417503 CCL26Q9Y258 94 aa1.84□□□□□ -2.11
SSXP9-201ENST00000417503 MYOFQ9NZM1 2061 aa1.83□□□□□ -2.12
SSXP9-201ENST00000417503 COL5A1P20908 1838 aaPredicted RBP1.83□□□□□ -2.12
SSXP9-201ENST00000417503 CCL3L1P16619 93 aa1.83□□□□□ -2.12
SSXP9-201ENST00000417503 KRTAP26-1Q6PEX3 210 aa1.83□□□□□ -2.12
SSXP9-201ENST00000417503 MYO7BQ6PIF6 2116 aa1.83□□□□□ -2.12
SSXP9-201ENST00000417503 Q8TAT8 98 aa1.83□□□□□ -2.12
SSXP9-201ENST00000417503 KRTAP17-1Q9BYP8 105 aa1.83□□□□□ -2.12
SSXP9-201ENST00000417503 COL4A6Q14031 1691 aa1.83□□□□□ -2.12
SSXP9-201ENST00000417503 ZNF831Q5JPB2 1677 aa1.83□□□□□ -2.12
SSXP9-201ENST00000417503 SHANK1Q9Y566 2161 aa1.82□□□□□ -2.12
SSXP9-201ENST00000417503 BRWD1Q9NSI6 2320 aa1.82□□□□□ -2.12
SSXP9-201ENST00000417503 DEFB131BA0A096LNP1 70 aa1.82□□□□□ -2.12
SSXP9-201ENST00000417503 A0A1B0GU69 56 aa1.82□□□□□ -2.12
SSXP9-201ENST00000417503 P0C880 135 aa1.82□□□□□ -2.12
SSXP9-201ENST00000417503 RNASE3P12724 160 aaKnown RBP1.82□□□□□ -2.12
SSXP9-201ENST00000417503 RPS27P42677 84 aaKnown RBP1.82□□□□□ -2.12
SSXP9-201ENST00000417503 SPATA8Q6RVD6 105 aa1.82□□□□□ -2.12
SSXP9-201ENST00000417503 COA5Q86WW8 74 aa1.82□□□□□ -2.12
SSXP9-201ENST00000417503 ZCCHC13Q8WW36 166 aaKnown RBP1.82□□□□□ -2.12
SSXP9-201ENST00000417503 TP53AIP1Q9HCN2 124 aa1.82□□□□□ -2.12
SSXP9-201ENST00000417503 MPDZO75970 2070 aa1.82□□□□□ -2.12
SSXP9-201ENST00000417503 ZGRF1Q86YA3 2104 aa1.82□□□□□ -2.12
SSXP9-201ENST00000417503 LTBP2Q14767 1821 aa1.82□□□□□ -2.12
SSXP9-201ENST00000417503 SPAG17Q6Q759 2223 aa1.81□□□□□ -2.12
SSXP9-201ENST00000417503 TRGV1A0A0A0MS02 117 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms