RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 HERVK_113P63121 156 aa6.87□□□□□ -1.31
DDB1-202ENST00000414411 LINC00242Q5T6M2 205 aa6.87□□□□□ -1.31
DDB1-202ENST00000414411 SPANXDQ9BXN6 97 aa6.87□□□□□ -1.31
DDB1-202ENST00000414411 GTSF1LQ9H1H1 148 aa6.87□□□□□ -1.31
DDB1-202ENST00000414411 SPANXCQ9NY87 97 aa6.87□□□□□ -1.31
DDB1-202ENST00000414411 NUPR2A6NF83 97 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 IGHV3-33P01772 117 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 GYPEP15421 78 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 COX6A2Q02221 97 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 SMAGPQ0VAQ4 97 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 TRBV20-1A0A075B6N2 111 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 A0A096LPF7 62 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 IGLV5-39A0A0G2JS06 123 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 PSMB2P49721 201 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 MIAQ16674 131 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 ETDBQ3ZM63 59 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 ADAMTSL4-AS1Q5T5F5 129 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 TMEM101Q96IK0 257 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 LYSTQ99698 3801 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 TMEM243Q9BU79 118 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 CDC42SE2Q9NRR3 84 aa6.86□□□□□ -1.31
DDB1-202ENST00000414411 NDUFA1O15239 70 aa6.85□□□□□ -1.31
DDB1-202ENST00000414411 TIMM17BO60830 172 aa6.85□□□□□ -1.31
DDB1-202ENST00000414411 TCL1BO95988 128 aa6.85□□□□□ -1.31
DDB1-202ENST00000414411 SH2D6Q7Z4S9 175 aa6.85□□□□□ -1.31
DDB1-202ENST00000414411 APLNQ9ULZ1 77 aa6.85□□□□□ -1.31
DDB1-202ENST00000414411 C15orf53Q8NAA6 179 aa6.84□□□□□ -1.31
DDB1-202ENST00000414411 ERG28Q9UKR5 140 aa6.84□□□□□ -1.31
DDB1-202ENST00000414411 KLK5Q9Y337 293 aaPredicted RBP6.84□□□□□ -1.31
DDB1-202ENST00000414411 TRAV13-1A0A0B4J241 112 aa6.84□□□□□ -1.32
DDB1-202ENST00000414411 SMIM1B2RUZ4 78 aa6.84□□□□□ -1.32
DDB1-202ENST00000414411 C3orf84H3BNL1 204 aa6.84□□□□□ -1.32
DDB1-202ENST00000414411 H7C423 109 aa6.84□□□□□ -1.32
DDB1-202ENST00000414411 UBE2L6O14933 153 aa6.84□□□□□ -1.32
DDB1-202ENST00000414411 PRSS2P07478 247 aa6.84□□□□□ -1.32
DDB1-202ENST00000414411 ICOSQ9Y6W8 199 aa6.84□□□□□ -1.32
DDB1-202ENST00000414411 CASC10Q5T4H9 136 aa6.83□□□□□ -1.32
DDB1-202ENST00000414411 J3QR89 54 aa6.82□□□□□ -1.32
DDB1-202ENST00000414411 SCGB1C2P0DMR2 95 aa6.82□□□□□ -1.32
DDB1-202ENST00000414411 ATP6V0E2Q8NHE4 81 aa6.82□□□□□ -1.32
DDB1-202ENST00000414411 H7C2G1 150 aa6.82□□□□□ -1.32
DDB1-202ENST00000414411 SCGB1A1P11684 91 aa6.82□□□□□ -1.32
DDB1-202ENST00000414411 IFITM1P13164 125 aa6.82□□□□□ -1.32
DDB1-202ENST00000414411 Q9H8V8 135 aa6.82□□□□□ -1.32
DDB1-202ENST00000414411 TRBV6-8A0A0A6YYG3 113 aa6.81□□□□□ -1.32
DDB1-202ENST00000414411 Q1RN00 199 aa6.81□□□□□ -1.32
DDB1-202ENST00000414411 ESRGQ1W209 222 aa6.81□□□□□ -1.32
DDB1-202ENST00000414411 LYPD5Q6UWN5 251 aa6.81□□□□□ -1.32
DDB1-202ENST00000414411 NPC2P61916 151 aa6.8□□□□□ -1.32
DDB1-202ENST00000414411 CIRBPQ14011 172 aaKnown RBP6.8□□□□□ -1.32
DDB1-202ENST00000414411 ZNF625Q96I27 306 aaPredicted RBP6.8□□□□□ -1.32
DDB1-202ENST00000414411 VPS13DQ5THJ4 4388 aa6.8□□□□□ -1.32
DDB1-202ENST00000414411 TRBV30A0A0K0K1B3 111 aa6.8□□□□□ -1.32
DDB1-202ENST00000414411 GAGE6Q13070 117 aa6.8□□□□□ -1.32
DDB1-202ENST00000414411 DAND5Q8N907 189 aa6.8□□□□□ -1.32
DDB1-202ENST00000414411 A0A0A0MQY5 61 aa6.79□□□□□ -1.32
DDB1-202ENST00000414411 TRIAP1O43715 76 aa6.79□□□□□ -1.32
DDB1-202ENST00000414411 IGLV4-60A0A075B6I1 120 aa6.78□□□□□ -1.32
DDB1-202ENST00000414411 FOXI1Q12951 378 aa6.78□□□□□ -1.32
DDB1-202ENST00000414411 LINC00336Q6ZUF6 198 aa6.78□□□□□ -1.32
DDB1-202ENST00000414411 TEN1Q86WV5 123 aa6.78□□□□□ -1.32
DDB1-202ENST00000414411 LINC00308Q8TCZ7 52 aa6.78□□□□□ -1.32
DDB1-202ENST00000414411 CHCHD5Q9BSY4 110 aa6.78□□□□□ -1.32
DDB1-202ENST00000414411 DNAH1Q9P2D7 4330 aa6.78□□□□□ -1.32
DDB1-202ENST00000414411 LINC00588Q9Y4M8 146 aa6.78□□□□□ -1.32
DDB1-202ENST00000414411 ATXN8Q156A1 80 aa6.77□□□□□ -1.33
DDB1-202ENST00000414411 LELP1Q5T871 98 aa6.77□□□□□ -1.33
DDB1-202ENST00000414411 C9JAW5 83 aa6.76□□□□□ -1.33
DDB1-202ENST00000414411 SLC25A20O43772 301 aa6.76□□□□□ -1.33
DDB1-202ENST00000414411 CCL18P55774 89 aa6.76□□□□□ -1.33
DDB1-202ENST00000414411 PPDPFLQ8WWR9 84 aa6.76□□□□□ -1.33
DDB1-202ENST00000414411 COPS9Q8WXC6 57 aa6.76□□□□□ -1.33
DDB1-202ENST00000414411 GAGE12HA6NDE8 117 aa6.76□□□□□ -1.33
DDB1-202ENST00000414411 RPL13AP40429 203 aaKnown RBP6.76□□□□□ -1.33
DDB1-202ENST00000414411 MEIG1Q5JSS6 88 aa6.76□□□□□ -1.33
DDB1-202ENST00000414411 ANKRD29Q8N6D5 301 aa6.76□□□□□ -1.33
DDB1-202ENST00000414411 KMT2AQ03164 3969 aa6.75□□□□□ -1.33
DDB1-202ENST00000414411 IGHV3OR16-9A0A0B4J2B5 98 aa6.75□□□□□ -1.33
DDB1-202ENST00000414411 IGKV3OR2-268A0A0C4DH90 116 aa6.75□□□□□ -1.33
DDB1-202ENST00000414411 SOSTDC1Q6X4U4 206 aa6.75□□□□□ -1.33
DDB1-202ENST00000414411 COX7B2Q8TF08 81 aa6.75□□□□□ -1.33
DDB1-202ENST00000414411 UPK3BQ9BT76 320 aa6.75□□□□□ -1.33
DDB1-202ENST00000414411 PPDPFQ9H3Y8 114 aa6.75□□□□□ -1.33
DDB1-202ENST00000414411 COX6CP09669 75 aa6.74□□□□□ -1.33
DDB1-202ENST00000414411 CARD19Q96LW7 228 aa6.74□□□□□ -1.33
DDB1-202ENST00000414411 LINC01600Q96MT4 127 aa6.74□□□□□ -1.33
DDB1-202ENST00000414411 ALMS1Q8TCU4 4167 aa6.73□□□□□ -1.33
DDB1-202ENST00000414411 A0A087WZ39 114 aa6.73□□□□□ -1.33
DDB1-202ENST00000414411 WFDC10BQ8IUB3 73 aa6.73□□□□□ -1.33
DDB1-202ENST00000414411 TRBV10-2A0A0K0K1G8 114 aa6.72□□□□□ -1.33
DDB1-202ENST00000414411 LINC00959A0A1B0GUT2 108 aa6.72□□□□□ -1.33
DDB1-202ENST00000414411 A0A1B0GUV1 79 aa6.72□□□□□ -1.33
DDB1-202ENST00000414411 SIGMAR1Q99720 223 aa6.72□□□□□ -1.33
DDB1-202ENST00000414411 TOMM7Q9P0U1 55 aa6.72□□□□□ -1.33
DDB1-202ENST00000414411 KMT2CQ8NEZ4 4911 aaKnown RBP6.72□□□□□ -1.33
DDB1-202ENST00000414411 LST1O00453 97 aa6.72□□□□□ -1.33
DDB1-202ENST00000414411 LINC00476Q8WZB0 136 aa6.72□□□□□ -1.33
DDB1-202ENST00000414411 CLEC2BQ92478 149 aa6.72□□□□□ -1.33
DDB1-202ENST00000414411 SACSQ9NZJ4 4579 aa6.71□□□□□ -1.34
DDB1-202ENST00000414411 DNAH10OSP0CZ25 163 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms