RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 C6orf48Q9UBA6 75 aa4.9□□□□□ -1.63
CPSF4-202ENST00000412686 IGLV5-45A0A087WSX0 123 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 A0A087WYN8 130 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 SMIM1B2RUZ4 78 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 NDUFA1O15239 70 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 HIST1H2BKO60814 126 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 HIST1H2BJP06899 126 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 IGLC3P0DOY3 106 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 ZNF22P17026 224 aaPredicted RBP4.89□□□□□ -1.63
CPSF4-202ENST00000412686 HIST1H2BOP23527 126 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 HIST1H2BBP33778 126 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 HIST1H2BDP58876 126 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 HIST1H2BCP62807 126 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 SEC11AP67812 179 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 GAGE2BQ13066 116 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 HIST2H2BEQ16778 126 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 MAJINQ3KP22 176 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 ANKRD39Q53RE8 183 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.89□□□□□ -1.63
CPSF4-202ENST00000412686 LINC01561Q8N1V8 128 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 HIST1H2BHQ93079 126 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 HIST1H2BNQ99877 126 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 HIST1H2BMQ99879 126 aa4.89□□□□□ -1.63
CPSF4-202ENST00000412686 MRPL35Q9NZE8 188 aaKnown RBP4.89□□□□□ -1.63
CPSF4-202ENST00000412686 C11orf86A6NJI1 115 aa4.88□□□□□ -1.63
CPSF4-202ENST00000412686 H0Y8G0 127 aa4.88□□□□□ -1.63
CPSF4-202ENST00000412686 PRSS2P07478 247 aa4.88□□□□□ -1.63
CPSF4-202ENST00000412686 RPL18AQ02543 176 aaKnown RBP4.88□□□□□ -1.63
CPSF4-202ENST00000412686 C9orf116Q5BN46 136 aaPredicted RBP4.88□□□□□ -1.63
CPSF4-202ENST00000412686 DPH3Q96FX2 82 aa4.88□□□□□ -1.63
CPSF4-202ENST00000412686 KRTAP9-2Q9BYQ4 174 aa4.88□□□□□ -1.63
CPSF4-202ENST00000412686 LOC107984640A0A0U1RRK4 108 aa4.87□□□□□ -1.63
CPSF4-202ENST00000412686 LEPROTL1O95214 131 aa4.87□□□□□ -1.63
CPSF4-202ENST00000412686 FABP4P15090 132 aa4.87□□□□□ -1.63
CPSF4-202ENST00000412686 S100A1P23297 94 aa4.87□□□□□ -1.63
CPSF4-202ENST00000412686 PTTG1IPP53801 180 aa4.87□□□□□ -1.63
CPSF4-202ENST00000412686 Q8IZM0 81 aa4.87□□□□□ -1.63
CPSF4-202ENST00000412686 STPG4Q8N801 248 aa4.87□□□□□ -1.63
CPSF4-202ENST00000412686 CHTOPQ9Y3Y2 248 aaKnown RBP4.87□□□□□ -1.63
CPSF4-202ENST00000412686 A0A1W2PNN7 141 aa4.86□□□□□ -1.63
CPSF4-202ENST00000412686 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.86□□□□□ -1.63
CPSF4-202ENST00000412686 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
CPSF4-202ENST00000412686 CKS1BP61024 79 aa4.86□□□□□ -1.63
CPSF4-202ENST00000412686 RNF151Q2KHN1 245 aa4.86□□□□□ -1.63
CPSF4-202ENST00000412686 GAGE2EQ4V326 116 aa4.86□□□□□ -1.63
CPSF4-202ENST00000412686 C6orf226Q5I0X4 101 aa4.86□□□□□ -1.63
CPSF4-202ENST00000412686 Q6ZRP5 223 aa4.86□□□□□ -1.63
CPSF4-202ENST00000412686 COX7B2Q8TF08 81 aa4.86□□□□□ -1.63
CPSF4-202ENST00000412686 KRTAP4-12Q9BQ66 201 aa4.86□□□□□ -1.63
CPSF4-202ENST00000412686 PLAC8Q9NZF1 115 aa4.86□□□□□ -1.63
CPSF4-202ENST00000412686 GAGE2DQ9UEU5 116 aa4.86□□□□□ -1.63
CPSF4-202ENST00000412686 TRAV12-1A0A0B4J245 112 aa4.85□□□□□ -1.63
CPSF4-202ENST00000412686 FAM168BA1KXE4 195 aa4.85□□□□□ -1.63
CPSF4-202ENST00000412686 F8VRH5 84 aa4.85□□□□□ -1.63
CPSF4-202ENST00000412686 F8WDY8 70 aa4.85□□□□□ -1.63
CPSF4-202ENST00000412686 H3BRM9 83 aa4.85□□□□□ -1.63
CPSF4-202ENST00000412686 ODF1Q14990 250 aa4.85□□□□□ -1.63
CPSF4-202ENST00000412686 TMEM170BQ5T4T1 132 aa4.85□□□□□ -1.63
CPSF4-202ENST00000412686 PMCHL2Q9BQD1 86 aa4.85□□□□□ -1.63
CPSF4-202ENST00000412686 ABCA13Q86UQ4 5058 aa4.84□□□□□ -1.63
CPSF4-202ENST00000412686 IGLV5-39A0A0G2JS06 123 aa4.84□□□□□ -1.63
CPSF4-202ENST00000412686 TRBV30A0A0K0K1B3 111 aa4.84□□□□□ -1.63
CPSF4-202ENST00000412686 KRTAP9-6A0A140TA67 174 aa4.84□□□□□ -1.63
CPSF4-202ENST00000412686 TLX1NBP0CAT3 122 aa4.84□□□□□ -1.63
CPSF4-202ENST00000412686 KRTAP19-1Q8IUB9 90 aa4.84□□□□□ -1.63
CPSF4-202ENST00000412686 HSPB8Q9UJY1 196 aa4.84□□□□□ -1.63
CPSF4-202ENST00000412686 TMEM223A0PJW6 202 aa4.83□□□□□ -1.64
CPSF4-202ENST00000412686 NDUFC2-KCTD14E9PQ53 114 aa4.83□□□□□ -1.64
CPSF4-202ENST00000412686 INAFM2P0DMQ5 153 aa4.83□□□□□ -1.64
CPSF4-202ENST00000412686 CXCL5P42830 114 aa4.83□□□□□ -1.64
CPSF4-202ENST00000412686 HNRNPA3P51991 378 aaKnown RBP4.83□□□□□ -1.64
CPSF4-202ENST00000412686 RPL37AP61513 92 aaKnown RBP4.83□□□□□ -1.64
CPSF4-202ENST00000412686 C9orf129Q5T035 196 aaKnown RBP4.83□□□□□ -1.64
CPSF4-202ENST00000412686 KRTAP7-1Q8IUC3 87 aa4.83□□□□□ -1.64
CPSF4-202ENST00000412686 LINC00474Q9P2X8 69 aa4.83□□□□□ -1.64
CPSF4-202ENST00000412686 PKIGQ9Y2B9 76 aa4.83□□□□□ -1.64
CPSF4-202ENST00000412686 PLA2G1BP04054 148 aaKnown RBP4.82□□□□□ -1.64
CPSF4-202ENST00000412686 COA6Q5JTJ3 125 aaKnown RBP4.82□□□□□ -1.64
CPSF4-202ENST00000412686 PHF5AQ7RTV0 110 aaKnown RBP4.82□□□□□ -1.64
CPSF4-202ENST00000412686 FAM19A5Q7Z5A7 132 aaPredicted RBP4.82□□□□□ -1.64
CPSF4-202ENST00000412686 ZNF625Q96I27 306 aaPredicted RBP4.82□□□□□ -1.64
CPSF4-202ENST00000412686 XAGE1AQ9HD64 81 aa4.82□□□□□ -1.64
CPSF4-202ENST00000412686 KRTAP11-1Q8IUC1 163 aa4.81□□□□□ -1.64
CPSF4-202ENST00000412686 MAP1LC3CQ9BXW4 147 aa4.81□□□□□ -1.64
CPSF4-202ENST00000412686 SYS1-DBNDD2H3BUS1 97 aa4.8□□□□□ -1.64
CPSF4-202ENST00000412686 PFN2P35080 140 aa4.8□□□□□ -1.64
CPSF4-202ENST00000412686 TSPEAR-AS2P59090 65 aa4.8□□□□□ -1.64
CPSF4-202ENST00000412686 SERTAD4-AS1Q5TG53 156 aa4.8□□□□□ -1.64
CPSF4-202ENST00000412686 C7orf33Q8WU49 177 aa4.8□□□□□ -1.64
CPSF4-202ENST00000412686 DPM2O94777 84 aa4.79□□□□□ -1.64
CPSF4-202ENST00000412686 IGKCP01834 107 aa4.79□□□□□ -1.64
CPSF4-202ENST00000412686 C3orf79P0CE67 100 aa4.79□□□□□ -1.64
CPSF4-202ENST00000412686 PRR3P79522 188 aaKnown RBP4.79□□□□□ -1.64
CPSF4-202ENST00000412686 ERG28Q9UKR5 140 aa4.79□□□□□ -1.64
CPSF4-202ENST00000412686 PCLOQ9Y6V0 5065 aa4.79□□□□□ -1.64
CPSF4-202ENST00000412686 A0A0U1RRA0 63 aa4.78□□□□□ -1.64
CPSF4-202ENST00000412686 M0QXV9 152 aa4.78□□□□□ -1.64
CPSF4-202ENST00000412686 PLNP26678 52 aa4.78□□□□□ -1.64
CPSF4-202ENST00000412686 KRTDAPP60985 99 aa4.78□□□□□ -1.64
CPSF4-202ENST00000412686 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms