RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 FGF6P10767 208 aa3.68□□□□□ -1.82
LINC00396-201ENST00000411690 FOXA3P55318 350 aaPredicted RBP3.68□□□□□ -1.82
LINC00396-201ENST00000411690 MT1HP80294 61 aa3.68□□□□□ -1.82
LINC00396-201ENST00000411690 SYCNQ0VAF6 134 aa3.68□□□□□ -1.82
LINC00396-201ENST00000411690 COTL1Q14019 142 aa3.68□□□□□ -1.82
LINC00396-201ENST00000411690 LINC00173Q6ZV60 143 aa3.68□□□□□ -1.82
LINC00396-201ENST00000411690 TYMSOSQ8TAI1 123 aa3.68□□□□□ -1.82
LINC00396-201ENST00000411690 BORCS7Q96B45 105 aa3.68□□□□□ -1.82
LINC00396-201ENST00000411690 VAMP8Q9BV40 100 aa3.68□□□□□ -1.82
LINC00396-201ENST00000411690 PPDPFQ9H3Y8 114 aa3.68□□□□□ -1.82
LINC00396-201ENST00000411690 A0A1B0GV90 55 aa3.67□□□□□ -1.82
LINC00396-201ENST00000411690 A0A1B0GXF2 115 aa3.67□□□□□ -1.82
LINC00396-201ENST00000411690 TCAPO15273 167 aa3.67□□□□□ -1.82
LINC00396-201ENST00000411690 NUPR1O60356 82 aa3.67□□□□□ -1.82
LINC00396-201ENST00000411690 CTRLP40313 264 aa3.67□□□□□ -1.82
LINC00396-201ENST00000411690 TWIST1Q15672 202 aa3.67□□□□□ -1.82
LINC00396-201ENST00000411690 RNASEKQ6P5S7 137 aaKnown RBP3.67□□□□□ -1.82
LINC00396-201ENST00000411690 SVIPQ8NHG7 77 aa3.67□□□□□ -1.82
LINC00396-201ENST00000411690 CHCHD10Q8WYQ3 142 aaPredicted RBP3.67□□□□□ -1.82
LINC00396-201ENST00000411690 CHCHD1Q96BP2 118 aaKnown RBP3.67□□□□□ -1.82
LINC00396-201ENST00000411690 SNHG12Q9BXW3 62 aa3.67□□□□□ -1.82
LINC00396-201ENST00000411690 UQCR10Q9UDW1 63 aa3.67□□□□□ -1.82
LINC00396-201ENST00000411690 C19orf71A6NCJ1 209 aa3.66□□□□□ -1.82
LINC00396-201ENST00000411690 LINC00614P0C842 121 aa3.66□□□□□ -1.82
LINC00396-201ENST00000411690 HBBP68871 147 aa3.66□□□□□ -1.82
LINC00396-201ENST00000411690 SUMO4Q6EEV6 95 aa3.66□□□□□ -1.82
LINC00396-201ENST00000411690 LYZL1Q6UWQ5 148 aa3.66□□□□□ -1.82
LINC00396-201ENST00000411690 KRTAP11-1Q8IUC1 163 aa3.66□□□□□ -1.82
LINC00396-201ENST00000411690 LINC00337Q8N6G1 96 aa3.66□□□□□ -1.82
LINC00396-201ENST00000411690 GATD1Q8NB37 220 aa3.66□□□□□ -1.82
LINC00396-201ENST00000411690 NUP35Q8NFH5 326 aa3.66□□□□□ -1.82
LINC00396-201ENST00000411690 C18orf32Q8TCD1 76 aa3.66□□□□□ -1.82
LINC00396-201ENST00000411690 TMEM101Q96IK0 257 aa3.66□□□□□ -1.82
LINC00396-201ENST00000411690 RNASE7Q9H1E1 156 aaKnown RBP3.66□□□□□ -1.82
LINC00396-201ENST00000411690 A0A087X002 238 aa3.65□□□□□ -1.83
LINC00396-201ENST00000411690 IGHV1-58A0A0C4DH39 117 aa3.65□□□□□ -1.83
LINC00396-201ENST00000411690 HIGD1CA8MV81 97 aa3.65□□□□□ -1.83
LINC00396-201ENST00000411690 SEC61BP60468 96 aaKnown RBP3.65□□□□□ -1.83
LINC00396-201ENST00000411690 RPL18AQ02543 176 aaKnown RBP3.65□□□□□ -1.83
LINC00396-201ENST00000411690 COL5A1-AS1Q5SY13 56 aa3.65□□□□□ -1.83
LINC00396-201ENST00000411690 ALKBH7Q9BT30 221 aaPredicted RBP3.65□□□□□ -1.83
LINC00396-201ENST00000411690 M0QY20 66 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 DLEU1O43261 78 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 HSBP1O75506 76 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 APOMO95445 188 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 C3orf79P0CE67 100 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 IGLC3P0DOY3 106 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 NTF3P20783 257 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 CAMPP49913 170 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 KRTDAPP60985 99 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 SMAGPQ0VAQ4 97 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 RIGQ13278 110 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 SPATA45Q537H7 98 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 MRPL54Q6P161 138 aaKnown RBP3.64□□□□□ -1.83
LINC00396-201ENST00000411690 ST20Q9HBF5 79 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 CBY1Q9Y3M2 126 aa3.64□□□□□ -1.83
LINC00396-201ENST00000411690 IGLV4-69A0A075B6H9 119 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.63□□□□□ -1.83
LINC00396-201ENST00000411690 TSHBP01222 138 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 IGLC6P0CF74 106 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 XCL1P47992 114 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 UBE2BP63146 152 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 PET117Q6UWS5 81 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 LINC00304Q8N9R0 145 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 ORAOV1Q8WV07 137 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 PGLYRP4Q96LB8 373 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 PMCHL2Q9BQD1 86 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 HSPB8Q9UJY1 196 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 PAM16Q9Y3D7 125 aa3.63□□□□□ -1.83
LINC00396-201ENST00000411690 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.62□□□□□ -1.83
LINC00396-201ENST00000411690 A0A1B0GUT8 65 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 IGKV2-29A2NJV5 120 aaPredicted RBP3.62□□□□□ -1.83
LINC00396-201ENST00000411690 ZNF861PO60384 105 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 NCR2O95944 276 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 MALP21145 153 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 FCER1GP30273 86 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 SS18Q15532 418 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 KIAA1644Q3SXP7 199 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 OR5A1Q8NGJ0 315 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 CAMK2N2Q96S95 79 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 TMEM191AQ9H0A3 160 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 LAMTOR2Q9Y2Q5 125 aa3.62□□□□□ -1.83
LINC00396-201ENST00000411690 FAM168BA1KXE4 195 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 SDHAF1A6NFY7 115 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 HSBP1L1C9JCN9 74 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 I3L3M4 83 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 M0R2T5 61 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 CCL25O15444 150 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 ZNF25P17030 456 aaPredicted RBP3.61□□□□□ -1.83
LINC00396-201ENST00000411690 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 KRTAP19-2Q3LHN2 52 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 Q6ZN92 141 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 FAM19A5Q7Z5A7 132 aaPredicted RBP3.61□□□□□ -1.83
LINC00396-201ENST00000411690 MRAP2Q96G30 205 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 OPRPNQ99935 248 aaPredicted RBP3.61□□□□□ -1.83
LINC00396-201ENST00000411690 MAP1LC3CQ9BXW4 147 aa3.61□□□□□ -1.83
LINC00396-201ENST00000411690 SYS1-DBNDD2H3BUS1 97 aa3.6□□□□□ -1.83
LINC00396-201ENST00000411690 H7C423 109 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms