RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 SHROOM2Q13796 1616 aa-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 TROQ12816 1431 aaPredicted RBP-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 LOC100130705A0A1B0GUX0 176 aa-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 CHKB-CPT1BH3BT56 60 aa-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 I3L3M4 83 aa-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 AKAP14Q86UN6 197 aa-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 LCN9Q8WX39 176 aa-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 ANP32BQ92688 251 aaKnown RBP-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 SNRNP25Q9BV90 132 aaKnown RBP-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 UQCR10Q9UDW1 63 aa-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 ARL2-SNX15V9GYD0 113 aa-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 TEX15Q9BXT5 2789 aa-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 EHBP1L1Q8N3D4 1523 aa-0.96□□□□□ -2.56
RNU2-54P-201ENST00000410299 PLEKHH2Q8IVE3 1493 aa-0.97□□□□□ -2.56
RNU2-54P-201ENST00000410299 KALRNO60229 2985 aa-0.97□□□□□ -2.56
RNU2-54P-201ENST00000410299 MGAM2Q2M2H8 2515 aa-0.97□□□□□ -2.56
RNU2-54P-201ENST00000410299 UBE2D3P61077 147 aa-0.97□□□□□ -2.56
RNU2-54P-201ENST00000410299 UBE2D2P62837 147 aa-0.97□□□□□ -2.56
RNU2-54P-201ENST00000410299 SEC11AP67812 179 aa-0.97□□□□□ -2.56
RNU2-54P-201ENST00000410299 SMIM21Q3B7S5 101 aa-0.97□□□□□ -2.56
RNU2-54P-201ENST00000410299 COMMD6Q7Z4G1 85 aa-0.97□□□□□ -2.56
RNU2-54P-201ENST00000410299 ARL11Q969Q4 196 aa-0.97□□□□□ -2.56
RNU2-54P-201ENST00000410299 NIPBLQ6KC79 2804 aaeCLIP-0.97□□□□□ -2.56
RNU2-54P-201ENST00000410299 VPS13BQ7Z7G8 4022 aa-0.97□□□□□ -2.57
RNU2-54P-201ENST00000410299 DNAH2Q9P225 4427 aa-0.97□□□□□ -2.57
RNU2-54P-201ENST00000410299 CEP152O94986 1710 aa-0.98□□□□□ -2.57
RNU2-54P-201ENST00000410299 ARPC4P59998 168 aa-0.98□□□□□ -2.57
RNU2-54P-201ENST00000410299 C5orf38Q86SI9 138 aa-0.98□□□□□ -2.57
RNU2-54P-201ENST00000410299 C8orf59Q8N0T1 100 aaPredicted RBP-0.98□□□□□ -2.57
RNU2-54P-201ENST00000410299 PFDN5Q99471 154 aa-0.98□□□□□ -2.57
RNU2-54P-201ENST00000410299 MARF1Q9Y4F3 1742 aaKnown RBP-0.98□□□□□ -2.57
RNU2-54P-201ENST00000410299 WDR87Q6ZQQ6 2873 aa-0.98□□□□□ -2.57
RNU2-54P-201ENST00000410299 ADGRL2O95490 1459 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 ACACAQ13085 2346 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 A0A1B0GWA3 101 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 H3BNG1 76 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 CCL22O00626 93 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 DR1Q01658 176 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 Q56UQ5 140 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 C9orf153Q5TBE3 101 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 LINC00846Q9NV44 126 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 LINC00474Q9P2X8 69 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 NUP188Q5SRE5 1749 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 EDC4Q6P2E9 1401 aaKnown RBP-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 TCHHQ07283 1943 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 NLRP1Q9C000 1473 aa-0.99□□□□□ -2.57
RNU2-54P-201ENST00000410299 DIP2CQ9Y2E4 1556 aa-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 CICQ96RK0 1608 aaPredicted RBP-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 SCN7AQ01118 1682 aa-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 NBEAQ8NFP9 2946 aa-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 A0A1B0GU69 56 aa-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 MIF4GDA9UHW6 222 aaKnown RBP-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 SAA2P0DJI9 122 aaPredicted RBP-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 MRPL34Q9BQ48 92 aaKnown RBP-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 PAIP2BQ9ULR5 123 aaKnown RBP-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 MYH7P12883 1935 aa-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 RNF213Q63HN8 5207 aa-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 UTP20O75691 2785 aaKnown RBP-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 MRC2Q9UBG0 1479 aa-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 RYR2Q92736 4967 aa-1□□□□□ -2.57
RNU2-54P-201ENST00000410299 KIAA1551Q9HCM1 1747 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 GCN1Q92616 2671 aaKnown RBP-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 MTORP42345 2549 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 TRAV30A0A087WSZ9 112 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 APOC2P02655 101 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 COX6CP09669 75 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 CATR1Q13166 79 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 MEIG1Q5JSS6 88 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 HEPN1Q6WQI6 88 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 CDKN2A-AS1Q9UH64 79 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 NCOA3Q9Y6Q9 1424 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 LRRC37AA6NMS7 1700 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 PHLPP1O60346 1717 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 ANK3Q12955 4377 aaKnown RBP-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 DNAH11Q96DT5 4516 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 PDE4DIPQ5VU43 2346 aa-1.01□□□□□ -2.57
RNU2-54P-201ENST00000410299 C9orf92A6NGG3 77 aa-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 FAM223BA6NKX1 122 aa-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 F6UZH7 168 aa-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 APOBP04114 4563 aaKnown RBP-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 SNCAP37840 140 aa-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 PLECQ15149 4684 aaKnown RBP-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 LAMA3Q16787 3333 aa-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 LRRK2Q5S007 2527 aa-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 PKD1L2Q7Z442 2459 aa-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 WFDC13Q8IUB5 93 aa-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 HIGD1BQ9P298 99 aa-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 USP9XQ93008 2570 aaPredicted RBP-1.02□□□□□ -2.57
RNU2-54P-201ENST00000410299 ROBO1Q9Y6N7 1651 aa-1.03□□□□□ -2.57
RNU2-54P-201ENST00000410299 CLIP1P30622 1438 aa-1.03□□□□□ -2.57
RNU2-54P-201ENST00000410299 NAIPQ13075 1403 aa-1.03□□□□□ -2.57
RNU2-54P-201ENST00000410299 UBE2L5PA0A1B0GUS4 154 aa-1.03□□□□□ -2.57
RNU2-54P-201ENST00000410299 FAM25AB3EWG3 89 aa-1.03□□□□□ -2.57
RNU2-54P-201ENST00000410299 FAM25CB3EWG5 89 aa-1.03□□□□□ -2.57
RNU2-54P-201ENST00000410299 FAM25GB3EWG6 89 aa-1.03□□□□□ -2.57
RNU2-54P-201ENST00000410299 TRAPPC2P0DI81 140 aa-1.03□□□□□ -2.57
RNU2-54P-201ENST00000410299 TRAPPC2BP0DI82 140 aa-1.03□□□□□ -2.57
RNU2-54P-201ENST00000410299 GNG11P61952 73 aa-1.03□□□□□ -2.57
RNU2-54P-201ENST00000410299 SELENOWP63302 87 aa-1.03□□□□□ -2.57
RNU2-54P-201ENST00000410299 UBE2L3P68036 154 aaKnown RBP-1.03□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms