RNA–Protein interactions for RNA: ENST00000409570.3

SCRN1-203, Transcript of secernin 1, humanhuman

TSL 4 BASIC

Gene SCRN1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-203ENST00000409570 VCX2Q9H322 139 aa10.11□□□□□ -0.79
SCRN1-203ENST00000409570 ERASQ7Z444 233 aa10.1□□□□□ -0.79
SCRN1-203ENST00000409570 AMELXQ99217 191 aa10.1□□□□□ -0.79
SCRN1-203ENST00000409570 MRPL35Q9NZE8 188 aaKnown RBP10.1□□□□□ -0.79
SCRN1-203ENST00000409570 UBE2D1P51668 147 aa10.09□□□□□ -0.79
SCRN1-203ENST00000409570 RAB5BP61020 215 aa10.09□□□□□ -0.79
SCRN1-203ENST00000409570 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
SCRN1-203ENST00000409570 RPL13AP40429 203 aaKnown RBP10.08□□□□□ -0.8
SCRN1-203ENST00000409570 SEC11AP67812 179 aa10.08□□□□□ -0.8
SCRN1-203ENST00000409570 FAM19A5Q7Z5A7 132 aaPredicted RBP10.08□□□□□ -0.8
SCRN1-203ENST00000409570 KRTAP7-1Q8IUC3 87 aa10.08□□□□□ -0.8
SCRN1-203ENST00000409570 OR10D4PQ8NGN7 298 aa10.08□□□□□ -0.8
SCRN1-203ENST00000409570 C18orf32Q8TCD1 76 aa10.08□□□□□ -0.8
SCRN1-203ENST00000409570 F8WDY8 70 aa10.07□□□□□ -0.8
SCRN1-203ENST00000409570 TLX1NBP0CAT3 122 aa10.07□□□□□ -0.8
SCRN1-203ENST00000409570 C10orf25Q5T742 122 aa10.07□□□□□ -0.8
SCRN1-203ENST00000409570 FAM19A3Q7Z5A8 133 aa10.07□□□□□ -0.8
SCRN1-203ENST00000409570 SCGB3A1Q96QR1 104 aa10.07□□□□□ -0.8
SCRN1-203ENST00000409570 LINC00614P0C842 121 aa10.06□□□□□ -0.8
SCRN1-203ENST00000409570 LINC00242Q5T6M2 205 aa10.06□□□□□ -0.8
SCRN1-203ENST00000409570 CBLN2Q8IUK8 224 aa10.06□□□□□ -0.8
SCRN1-203ENST00000409570 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
SCRN1-203ENST00000409570 ORAOV1Q8WV07 137 aa10.06□□□□□ -0.8
SCRN1-203ENST00000409570 NDUFA1O15239 70 aa10.05□□□□□ -0.8
SCRN1-203ENST00000409570 LINC00173Q6ZV60 143 aa10.05□□□□□ -0.8
SCRN1-203ENST00000409570 HERVK_113P63121 156 aa10.04□□□□□ -0.8
SCRN1-203ENST00000409570 C6orf48Q9UBA6 75 aa10.04□□□□□ -0.8
SCRN1-203ENST00000409570 M0QXV9 152 aa10.03□□□□□ -0.8
SCRN1-203ENST00000409570 GAGE2EQ4V326 116 aa10.03□□□□□ -0.8
SCRN1-203ENST00000409570 UNQ6190/PRO20217Q6UXQ8 127 aa10.03□□□□□ -0.8
SCRN1-203ENST00000409570 GAGE2DQ9UEU5 116 aa10.03□□□□□ -0.8
SCRN1-203ENST00000409570 UBE2BP63146 152 aa10.02□□□□□ -0.81
SCRN1-203ENST00000409570 TSPAN13O95857 204 aa10.01□□□□□ -0.81
SCRN1-203ENST00000409570 HBDP02042 147 aa10.01□□□□□ -0.81
SCRN1-203ENST00000409570 CHCHD1Q96BP2 118 aaKnown RBP10.01□□□□□ -0.81
SCRN1-203ENST00000409570 PMVKQ15126 192 aa10□□□□□ -0.81
SCRN1-203ENST00000409570 URB1-AS1Q96HZ7 61 aa10□□□□□ -0.81
SCRN1-203ENST00000409570 GEMIN7Q9H840 131 aaKnown RBP10□□□□□ -0.81
SCRN1-203ENST00000409570 MUC17Q685J3 4493 aa9.99□□□□□ -0.81
SCRN1-203ENST00000409570 ATP5LO75964 103 aa9.99□□□□□ -0.81
SCRN1-203ENST00000409570 A0A096LNJ9 63 aa9.98□□□□□ -0.81
SCRN1-203ENST00000409570 TINCRA0A1B0GVN0 87 aa9.98□□□□□ -0.81
SCRN1-203ENST00000409570 ZC2HC1BQ5TFG8 222 aa9.98□□□□□ -0.81
SCRN1-203ENST00000409570 CST9LQ9H4G1 147 aa9.98□□□□□ -0.81
SCRN1-203ENST00000409570 COLCA2A8K830 154 aa9.97□□□□□ -0.81
SCRN1-203ENST00000409570 ZNF861PO60384 105 aa9.97□□□□□ -0.81
SCRN1-203ENST00000409570 TRGC2P03986 189 aa9.97□□□□□ -0.81
SCRN1-203ENST00000409570 KIAA0087Q14695 138 aa9.97□□□□□ -0.81
SCRN1-203ENST00000409570 C9orf129Q5T035 196 aaKnown RBP9.97□□□□□ -0.81
SCRN1-203ENST00000409570 PACRGQ96M98 296 aaPredicted RBP9.97□□□□□ -0.81
SCRN1-203ENST00000409570 PDZD11Q5EBL8 140 aa9.96□□□□□ -0.82
SCRN1-203ENST00000409570 PRSS2P07478 247 aa9.95□□□□□ -0.82
SCRN1-203ENST00000409570 BAGE3Q86Y29 109 aa9.95□□□□□ -0.82
SCRN1-203ENST00000409570 Q8IZM0 81 aa9.95□□□□□ -0.82
SCRN1-203ENST00000409570 CDKN2A-AS1Q9UH64 79 aa9.95□□□□□ -0.82
SCRN1-203ENST00000409570 IGLV5-45A0A087WSX0 123 aa9.94□□□□□ -0.82
SCRN1-203ENST00000409570 LINC00469Q8N7U9 141 aa9.94□□□□□ -0.82
SCRN1-203ENST00000409570 A0A087X002 238 aa9.93□□□□□ -0.82
SCRN1-203ENST00000409570 TRBV30A0A0K0K1B3 111 aa9.93□□□□□ -0.82
SCRN1-203ENST00000409570 NDUFC2-KCTD14E9PQ53 114 aa9.93□□□□□ -0.82
SCRN1-203ENST00000409570 HSBP1O75506 76 aa9.93□□□□□ -0.82
SCRN1-203ENST00000409570 PMCHL1Q16048 86 aa9.93□□□□□ -0.82
SCRN1-203ENST00000409570 C2orf82Q6UX34 121 aa9.93□□□□□ -0.82
SCRN1-203ENST00000409570 H3BRM9 83 aa9.92□□□□□ -0.82
SCRN1-203ENST00000409570 C6orf226Q5I0X4 101 aa9.92□□□□□ -0.82
SCRN1-203ENST00000409570 NUPR1O60356 82 aa9.91□□□□□ -0.82
SCRN1-203ENST00000409570 IGLC3P0DOY3 106 aa9.91□□□□□ -0.82
SCRN1-203ENST00000409570 CXCL5P42830 114 aa9.91□□□□□ -0.82
SCRN1-203ENST00000409570 NDUFA6P56556 154 aa9.91□□□□□ -0.82
SCRN1-203ENST00000409570 CKS1BP61024 79 aa9.91□□□□□ -0.82
SCRN1-203ENST00000409570 TOMM7Q9P0U1 55 aa9.9□□□□□ -0.82
SCRN1-203ENST00000409570 SMIM1B2RUZ4 78 aa9.89□□□□□ -0.83
SCRN1-203ENST00000409570 TYMSOSQ8TAI1 123 aa9.89□□□□□ -0.83
SCRN1-203ENST00000409570 IFI27L1Q96BM0 104 aa9.89□□□□□ -0.83
SCRN1-203ENST00000409570 C22orf24Q9Y442 160 aa9.89□□□□□ -0.83
SCRN1-203ENST00000409570 TRAV12-1A0A0B4J245 112 aa9.88□□□□□ -0.83
SCRN1-203ENST00000409570 F8VRH5 84 aa9.87□□□□□ -0.83
SCRN1-203ENST00000409570 CRYGAP11844 174 aa9.87□□□□□ -0.83
SCRN1-203ENST00000409570 SCO1O75880 301 aa9.86□□□□□ -0.83
SCRN1-203ENST00000409570 SERF1AO75920 110 aa9.86□□□□□ -0.83
SCRN1-203ENST00000409570 COX7B2Q8TF08 81 aa9.86□□□□□ -0.83
SCRN1-203ENST00000409570 RETNLBQ9BQ08 111 aa9.86□□□□□ -0.83
SCRN1-203ENST00000409570 CHTOPQ9Y3Y2 248 aaKnown RBP9.86□□□□□ -0.83
SCRN1-203ENST00000409570 LEPROTL1O95214 131 aa9.85□□□□□ -0.83
SCRN1-203ENST00000409570 S100A1P23297 94 aa9.85□□□□□ -0.83
SCRN1-203ENST00000409570 FAM19A2Q8N3H0 131 aa9.85□□□□□ -0.83
SCRN1-203ENST00000409570 HSPB8Q9UJY1 196 aa9.85□□□□□ -0.83
SCRN1-203ENST00000409570 ZNF22P17026 224 aaPredicted RBP9.84□□□□□ -0.83
SCRN1-203ENST00000409570 RPL28P46779 137 aaKnown RBP9.84□□□□□ -0.83
SCRN1-203ENST00000409570 LBHQ53QV2 105 aaPredicted RBP9.84□□□□□ -0.83
SCRN1-203ENST00000409570 IGLV5-39A0A0G2JS06 123 aa9.83□□□□□ -0.84
SCRN1-203ENST00000409570 SPINK8P0C7L1 97 aa9.83□□□□□ -0.84
SCRN1-203ENST00000409570 KRTAP13-2Q52LG2 175 aa9.83□□□□□ -0.84
SCRN1-203ENST00000409570 SFTA2Q6UW10 78 aa9.83□□□□□ -0.84
SCRN1-203ENST00000409570 XAGE1AQ9HD64 81 aa9.83□□□□□ -0.84
SCRN1-203ENST00000409570 ANAPC11Q9NYG5 84 aa9.83□□□□□ -0.84
SCRN1-203ENST00000409570 BCE1O60756 84 aa9.82□□□□□ -0.84
SCRN1-203ENST00000409570 LINC00310P59036 64 aa9.82□□□□□ -0.84
SCRN1-203ENST00000409570 TPRXLQ17RH7 258 aa9.82□□□□□ -0.84
SCRN1-203ENST00000409570 TMEM170BQ5T4T1 132 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms