RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 SPATA25Q9BR10 227 aa4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 NAA38Q9BRA0 125 aaKnown RBP4.32□□□□□ -1.72
GTF3C3-202ENST00000409364 A0A0B4J2C4 111 aa4.31□□□□□ -1.72
GTF3C3-202ENST00000409364 ANGP03950 147 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-202ENST00000409364 DEFB121Q5J5C9 76 aa4.31□□□□□ -1.72
GTF3C3-202ENST00000409364 KPRPQ5T749 579 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-202ENST00000409364 LYRM7Q5U5X0 104 aa4.31□□□□□ -1.72
GTF3C3-202ENST00000409364 CD164L2Q6UWJ8 174 aa4.31□□□□□ -1.72
GTF3C3-202ENST00000409364 C5orf38Q86SI9 138 aa4.31□□□□□ -1.72
GTF3C3-202ENST00000409364 C11orf45Q8TAV5 145 aa4.31□□□□□ -1.72
GTF3C3-202ENST00000409364 PKD1L1Q8TDX9 2849 aa4.3□□□□□ -1.72
GTF3C3-202ENST00000409364 A0A0J9YWU9 116 aa4.3□□□□□ -1.72
GTF3C3-202ENST00000409364 XCL1P47992 114 aa4.3□□□□□ -1.72
GTF3C3-202ENST00000409364 REG3AQ06141 175 aa4.3□□□□□ -1.72
GTF3C3-202ENST00000409364 C6orf226Q5I0X4 101 aa4.3□□□□□ -1.72
GTF3C3-202ENST00000409364 MEIG1Q5JSS6 88 aa4.3□□□□□ -1.72
GTF3C3-202ENST00000409364 Q6ZTC4 211 aa4.3□□□□□ -1.72
GTF3C3-202ENST00000409364 PPDPFQ9H3Y8 114 aa4.3□□□□□ -1.72
GTF3C3-202ENST00000409364 ERG28Q9UKR5 140 aa4.3□□□□□ -1.72
GTF3C3-202ENST00000409364 DEFB131BA0A096LNP1 70 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 TM2D3Q9BRN9 247 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 TOMM7Q9P0U1 55 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 LOC107984156A0A0G2JMH3 177 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 IBA57-AS1B1ANH7 110 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 K7EIL1 84 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 COX7A2LO14548 114 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 TSPAN13O95857 204 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 IGHV3-33P01772 117 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 ARL17AQ8IVW1 177 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 LINC00308Q8TCZ7 52 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 CHCHD10Q8WYQ3 142 aaPredicted RBP4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 PRR34Q9NV39 138 aa4.29□□□□□ -1.72
GTF3C3-202ENST00000409364 TRBV20-1A0A075B6N2 111 aa4.28□□□□□ -1.72
GTF3C3-202ENST00000409364 TRAV8-4A0A0B4J246 113 aa4.28□□□□□ -1.72
GTF3C3-202ENST00000409364 F8W1H4 67 aa4.28□□□□□ -1.72
GTF3C3-202ENST00000409364 SCGB1C2P0DMR2 95 aa4.28□□□□□ -1.72
GTF3C3-202ENST00000409364 MALP21145 153 aa4.28□□□□□ -1.72
GTF3C3-202ENST00000409364 NANOS2P60321 138 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-202ENST00000409364 CLPSL2Q6UWE3 100 aa4.28□□□□□ -1.72
GTF3C3-202ENST00000409364 Q8IZM0 81 aa4.28□□□□□ -1.72
GTF3C3-202ENST00000409364 NOTCH1P46531 2555 aa4.27□□□□□ -1.73
GTF3C3-202ENST00000409364 TRAV10A0A0B4J240 114 aa4.27□□□□□ -1.73
GTF3C3-202ENST00000409364 A0A0U1RRA0 63 aa4.27□□□□□ -1.73
GTF3C3-202ENST00000409364 PRB2P02812 416 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-202ENST00000409364 CXCL5P42830 114 aa4.27□□□□□ -1.73
GTF3C3-202ENST00000409364 PSMB2P49721 201 aa4.27□□□□□ -1.73
GTF3C3-202ENST00000409364 LINC00158P58513 81 aa4.27□□□□□ -1.73
GTF3C3-202ENST00000409364 CKS1BP61024 79 aa4.27□□□□□ -1.73
GTF3C3-202ENST00000409364 DAND5Q8N907 189 aa4.27□□□□□ -1.73
GTF3C3-202ENST00000409364 KLK12Q9UKR0 248 aa4.27□□□□□ -1.73
GTF3C3-202ENST00000409364 KLK5Q9Y337 293 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-202ENST00000409364 TRBV30A0A0K0K1B3 111 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 H3BMG7 143 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 COX6CP09669 75 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 NPC2P61916 151 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 ESRGQ1W209 222 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 C15orf53Q8NAA6 179 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 MRAPQ8TCY5 172 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 MGAM2Q2M2H8 2515 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 IGLV10-54A0A075B6I4 117 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 EIF4EBP3O60516 100 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 CRPP02741 224 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 FOXI1Q12951 378 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 COX17Q14061 63 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 Q1RN00 199 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 ENHOQ6UWT2 76 aa4.26□□□□□ -1.73
GTF3C3-202ENST00000409364 GAGE12HA6NDE8 117 aa4.25□□□□□ -1.73
GTF3C3-202ENST00000409364 H7C2G1 150 aa4.25□□□□□ -1.73
GTF3C3-202ENST00000409364 KIAA0087Q14695 138 aa4.25□□□□□ -1.73
GTF3C3-202ENST00000409364 MIR7-3HGQ8N6C7 128 aa4.25□□□□□ -1.73
GTF3C3-202ENST00000409364 UBE2WQ96B02 151 aa4.25□□□□□ -1.73
GTF3C3-202ENST00000409364 NBEAL1Q6ZS30 2694 aa4.25□□□□□ -1.73
GTF3C3-202ENST00000409364 DNHD1Q96M86 4753 aa4.25□□□□□ -1.73
GTF3C3-202ENST00000409364 TRAV13-2A0A0B4J235 113 aa4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 PFN2P35080 140 aa4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 LINC01556Q5JQF7 62 aa4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 SOSTDC1Q6X4U4 206 aa4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 WFDC10BQ8IUB3 73 aa4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 MUC7Q8TAX7 377 aa4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 K7ERU9 68 aa4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 TCL1BO95988 128 aa4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 SEC61GP60059 68 aa4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 OCIAD2Q56VL3 154 aa4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 SND1-IT1Q9HBX3 110 aa4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.24□□□□□ -1.73
GTF3C3-202ENST00000409364 ANK2Q01484 3957 aa4.23□□□□□ -1.73
GTF3C3-202ENST00000409364 TRIAP1O43715 76 aa4.23□□□□□ -1.73
GTF3C3-202ENST00000409364 RPL13AP40429 203 aaKnown RBP4.23□□□□□ -1.73
GTF3C3-202ENST00000409364 CCL18P55774 89 aa4.23□□□□□ -1.73
GTF3C3-202ENST00000409364 WFDC2Q14508 124 aa4.23□□□□□ -1.73
GTF3C3-202ENST00000409364 ATXN8Q156A1 80 aa4.23□□□□□ -1.73
GTF3C3-202ENST00000409364 C2orf82Q6UX34 121 aa4.23□□□□□ -1.73
GTF3C3-202ENST00000409364 PRO0461Q9UI25 63 aa4.23□□□□□ -1.73
GTF3C3-202ENST00000409364 CMYA5Q8N3K9 4069 aa4.22□□□□□ -1.73
GTF3C3-202ENST00000409364 DNAH10OSP0CZ25 163 aa4.22□□□□□ -1.73
GTF3C3-202ENST00000409364 SPAG11BQ08648 103 aa4.22□□□□□ -1.73
GTF3C3-202ENST00000409364 C5orf47Q569G3 176 aa4.22□□□□□ -1.73
GTF3C3-202ENST00000409364 CDIP1Q9H305 208 aa4.22□□□□□ -1.73
GTF3C3-202ENST00000409364 DNAH3Q8TD57 4116 aa4.22□□□□□ -1.73
GTF3C3-202ENST00000409364 B9D2Q9BPU9 175 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms